Gene: Lsat_1_v5_gn_6_107780
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_6_107780
- Transcript Identifier Lsat_1_v5_gn_6_107780.1
- Gene Type Coding gene
- Location Lsat_1_v8_lg_6 : 175396778-175400143 : negative
Gene Family Information
- ID HOM05D004503
- #Genes/#Species 160/96
- Phylogenetic origin
- ID ORTHO05D003526
- #Genes/#Species 218/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Lsat_1_v5_gn_6_107780.v5
- pacid 38941436
Descriptions
- Description PTHR12811 - VACUOLAR PROTEIN SORTING VPS16
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0006388 | IEA | InterPro | tRNA splicing, via endonucleolytic cleavage and ligation | |
| GO:0007033 | ISO | PLAZA Homology (enrichment) | vacuole organization | HOM05D004503 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003972 | IEA | InterPro | RNA ligase (ATP) activity | |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D004503 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | InterPro | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |