Gene: FAN16G3448

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN16G3448
  • Transcript Identifier FAN16G3448.1
  • Gene Type Coding gene
  • Location Fvb3-3 : 21396693-21409945 : positive

Gene Family Information

  • ID HOM05D003203
  • #Genes/#Species 213/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id maker-Fvb3-3-snap-gene-214.23.v1.0.a1
  • pacid 50532819

Descriptions

  • Description PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006388
IEA
InterProtRNA splicing, via endonucleolytic cleavage and ligation
GO:0010928
ISO
PLAZA Integrative Orthologyregulation of auxin mediated signaling pathway AT1G07910
GO:0030968
ISO
PLAZA Integrative Orthologyendoplasmic reticulum unfolded protein response AT1G07910
GO:0042245
ISO
PLAZA Integrative OrthologyRNA repair AT1G07910

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003972
IEA
InterProRNA ligase (ATP) activity
GO:0051731
ISO
PLAZA Integrative Orthologypolynucleotide 5'-hydroxyl-kinase activity AT1G07910
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G07910
GO:0004113
ISO
PLAZA Integrative Orthology2',3'-cyclic-nucleotide 3'-phosphodiesterase activity AT1G07910

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005844
ISO
PLAZA Integrative Orthologypolysome AT1G07910
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G07910

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038837 tRNA ligase 1
Mapman id Description
35.1 not assigned.annotated