Gene: Eucgr.B02467

General Information

Structural Information

  • Species Eucalyptus grandis
  • Gene Identifier Eucgr.B02467
  • Transcript Identifier Eucgr.B02467.1
  • Gene Type Coding gene
  • Location Chr02 : 44739846-44761142 : positive

Gene Family Information

  • ID HOM05D003203
  • #Genes/#Species 213/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 32061370
  • synonym Egrandis_v1_0.000870m
  • id Eucgr.B02467.v2.0

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006388
IEA
InterProtRNA splicing, via endonucleolytic cleavage and ligation
GO:0010928
ISO
PLAZA Integrative Orthologyregulation of auxin mediated signaling pathway AT1G07910
GO:0030968
ISO
PLAZA Integrative Orthologyendoplasmic reticulum unfolded protein response AT1G07910
GO:0042245
ISO
PLAZA Integrative OrthologyRNA repair AT1G07910

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003972
IEA
InterProRNA ligase (ATP) activity
GO:0005524
IEA
InterProATP binding
GO:0051731
ISO
PLAZA Integrative Orthologypolynucleotide 5'-hydroxyl-kinase activity AT1G07910
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G07910
GO:0004113
ISO
PLAZA Integrative Orthology2',3'-cyclic-nucleotide 3'-phosphodiesterase activity AT1G07910

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005844
ISO
PLAZA Integrative Orthologypolysome AT1G07910
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G07910

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015965 tRNA ligase, phosphodiesterase
IPR038837 tRNA ligase 1
Mapman id Description
35.1 not assigned.annotated