Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g16520 Schrenkiella parvula HOM05D001605 ORTHO05D003014 2.1e-111 406.0 247 100.0
BcaB01g03900 Brassica carinata HOM05D001605 ORTHO05D003014 7.8e-50 201.4 115 87.0
BcaC01g05804 Brassica carinata HOM05D001605 ORTHO05D003014 1.0e-49 201.1 117 86.3
C03p22230 Brassica napus HOM05D001605 ORTHO05D003014 1.0e-49 201.1 117 86.3
BolC3t14607H Brassica oleracea HOM05D001605 ORTHO05D003014 1.0e-49 201.1 117 86.3
BraA03t11162Z Brassica rapa HOM05D001605 ORTHO05D003014 1.3e-49 200.7 117 82.9
A03p19040 Brassica napus HOM05D001605 ORTHO05D003014 5.6e-48 195.3 111 85.6
THA.LOC104798874 Tarenaya hassleriana HOM05D001605 ORTHO05D003014 8.7e-41 171.4 111 73.9
CARHR259450 Cardamine hirsuta HOM05D001605 ORTHO05D003014 5.6e-40 168.7 112 73.2
THA.LOC104806843 Tarenaya hassleriana HOM05D001605 ORTHO05D003014 7.3e-40 168.3 114 70.2
AT2G34210 Arabidopsis thaliana HOM05D001605 ORTHO05D003014 1.3e-39 167.5 113 73.5
Thhalv10028382m.g Eutrema salsugineum HOM05D001605 ORTHO05D003014 1.1e-38 164.5 115 69.6
Sp6g09600 Schrenkiella parvula HOM05D001605 ORTHO05D003014 1.1e-38 164.5 112 70.5
BcaB01g02866 Brassica carinata HOM05D001605 ORTHO05D003014 1.8e-38 163.7 112 69.6
BcaC01g04775 Brassica carinata HOM05D001605 ORTHO05D003014 1.8e-38 163.7 112 69.6
C03p33860 Brassica napus HOM05D001605 ORTHO05D003014 1.8e-38 163.7 112 69.6
BolC3t15701H Brassica oleracea HOM05D001605 ORTHO05D003014 1.8e-38 163.7 112 69.6
AL4G30140 Arabidopsis lyrata HOM05D001605 ORTHO05D003014 2.4e-38 163.3 113 71.7
AL6G42110 Arabidopsis lyrata HOM05D001605 ORTHO05D003014 2.4e-38 163.3 112 70.5
BcaB01g01341 Brassica carinata HOM05D001605 ORTHO05D003014 2.4e-38 163.3 112 69.6
A03p27980 Brassica napus HOM05D001605 ORTHO05D003014 2.4e-38 163.3 112 69.6
BraA03t12015Z Brassica rapa HOM05D001605 ORTHO05D003014 2.4e-38 163.3 112 69.6
Carub.0006s2691 Capsella rubella HOM05D001605 ORTHO05D003014 4.0e-38 162.5 112 70.5
AT4G08350 Arabidopsis thaliana HOM05D001605 ORTHO05D003014 6.9e-38 161.8 112 68.8
Aa31LG9G14140 Aethionema arabicum HOM05D001605 ORTHO05D003014 3.4e-37 159.5 112 69.6
BcaC04g20905 Brassica carinata HOM05D001605 ORTHO05D003014 4.4e-37 159.1 112 67.9
C09p38130 Brassica napus HOM05D001605 ORTHO05D003014 4.4e-37 159.1 112 67.9
BolC9t56650H Brassica oleracea HOM05D001605 ORTHO05D003014 4.4e-37 159.1 112 67.9
Carub.0004s1584 Capsella rubella HOM05D001605 ORTHO05D003014 5.8e-37 158.7 111 73.0
A09p30220 Brassica napus HOM05D001605 ORTHO05D003014 7.6e-37 158.3 112 67.0
BraA09t38589Z Brassica rapa HOM05D001605 ORTHO05D003014 7.6e-37 158.3 112 67.0
Cc10_g12970 Coffea canephora HOM05D001605 ORTHO05D003014 1.1e-35 154.5 114 62.3
Manes.02G174700 Manihot esculenta HOM05D001605 ORTHO05D003014 1.4e-35 154.1 116 62.9
Hma1.2p1_0107F.1_g051400 Hydrangea macrophylla HOM05D001605 ORTHO05D003014 1.9e-35 153.7 112 64.3
Nn5g28614 Nelumbo nucifera HOM05D001605 ORTHO05D003014 1.9e-35 153.7 116 62.1
Oeu001561.1 Olea europaea HOM05D001605 ORTHO05D003014 3.2e-35 152.9 116 62.1
Cpa.g.sc188.8 Carica papaya HOM05D001605 ORTHO05D003014 9.3e-35 151.4 112 65.2
PSO063G1730 Papaver somniferum HOM05D001605 ORTHO05D003014 9.3e-35 151.4 116 62.1
PSO782G0565 Papaver somniferum HOM05D001605 ORTHO05D003014 9.3e-35 151.4 116 62.1
Migut.C01045 Erythranthe guttata HOM05D001605 ORTHO05D003014 1.6e-34 150.6 116 59.5
Lj4C691T3 Lonicera japonica HOM05D001605 ORTHO05D003014 2.7e-34 149.8 116 61.2
MSTRG.1376 Avicennia marina HOM05D001605 ORTHO05D003014 3.5e-34 149.4 109 65.1
unitig_748.g7696 Utricularia gibba HOM05D001605 ORTHO05D003014 3.5e-34 149.4 109 62.4
Manes.18G086700 Manihot esculenta HOM05D001605 ORTHO05D003014 4.6e-34 149.1 112 64.3
MBI04_g13672_MAGBIO Magnolia biondii HOM05D001605 ORTHO05D003014 6.0e-34 148.7 114 60.5
arahy.Tifrunner.gnm1.ann1.SUKE0C Arachis hypogaea HOM05D001605 ORTHO05D003014 7.9e-34 148.3 112 65.2
arahy.Tifrunner.gnm1.ann1.XKFQ8F Arachis hypogaea HOM05D001605 ORTHO05D003014 7.9e-34 148.3 112 65.2
TAR625G1035 Trochodendron aralioides HOM05D001605 ORTHO05D003014 7.9e-34 148.3 115 61.7
Potri.004G162500 Populus trichocarpa HOM05D001605 ORTHO05D003014 1.0e-33 147.9 112 61.6
SGA_v2.0_scaffold48G17942 Striga asiatica HOM05D001605 ORTHO05D003014 1.3e-33 147.5 111 63.1
arahy.Tifrunner.gnm1.ann1.E7CKP3 Arachis hypogaea HOM05D001605 ORTHO05D003014 2.3e-33 146.7 112 64.3
Lalb_Chr11g0066411 Lupinus albus HOM05D001605 ORTHO05D003014 2.3e-33 146.7 116 63.8
CSS0028371 Camellia sinensis var. sinensis HOM05D001605 ORTHO05D003014 3.0e-33 146.4 112 62.5
Lalb_Chr08g0240791 Lupinus albus HOM05D001605 ORTHO05D003014 3.0e-33 146.4 112 65.2
Lalb_Chr23g0271331 Lupinus albus HOM05D001605 ORTHO05D003014 3.0e-33 146.4 115 61.7
TAR381G0699 Trochodendron aralioides HOM05D001605 ORTHO05D003014 3.0e-33 146.4 112 61.6
CANSAT25G3051 Cannabis sativa HOM05D001605 ORTHO05D003014 3.9e-33 146.0 116 62.1
Ca_16648_v3 Cicer arietinum L. HOM05D001605 ORTHO05D003014 3.9e-33 146.0 112 65.2
Sabra09G0095400 Salix brachista HOM05D001605 ORTHO05D003014 3.9e-33 146.0 111 61.3
ClCG08G006430 Citrullus lanatus HOM05D001605 ORTHO05D003014 6.6e-33 145.2 112 61.6
MELO3C008414.2 Cucumis melo HOM05D001605 ORTHO05D003014 6.6e-33 145.2 112 61.6
CsaV3_6G031000 Cucumis sativus L. HOM05D001605 ORTHO05D003014 6.6e-33 145.2 112 61.6
Potri.009G124200 Populus trichocarpa HOM05D001605 ORTHO05D003014 8.7e-33 144.8 112 59.8
CiPaw.16G018200 Carya illinoinensis HOM05D001605 ORTHO05D003014 1.1e-32 144.4 111 63.1
Dinv41129 Davidia involucrata HOM05D001605 ORTHO05D003014 1.5e-32 144.1 112 60.7
Nitab4.5_0000445g0150 Nicotiana tabacum HOM05D001605 ORTHO05D003014 1.5e-32 144.1 116 57.8
Solyc04g064700.4 Solanum lycopersicum HOM05D001605 ORTHO05D003014 1.5e-32 144.1 116 56.9
Sopen04g026660 Solanum pennellii HOM05D001605 ORTHO05D003014 1.5e-32 144.1 116 56.9
PGSC0003DMG402024850 Solanum tuberosum HOM05D001605 ORTHO05D003014 1.5e-32 144.1 116 56.9
Psat5g080840 Pisum sativum HOM05D001605 ORTHO05D003014 1.9e-32 143.7 112 64.3
SalBow7G2351 Salvia bowleyana HOM05D001605 ORTHO05D003014 1.9e-32 143.7 116 59.5
QL02p025489 Quercus lobata HOM05D001605 ORTHO05D003014 2.5e-32 143.3 112 60.7
Prupe.8G018000 Prunus persica HOM05D001605 ORTHO05D003014 3.3e-32 142.9 112 60.7
Sed0025518 Sechium edule HOM05D001605 ORTHO05D003014 3.3e-32 142.9 116 61.2
Hund26733 Selenicereus undatus HOM05D001605 ORTHO05D003014 3.3e-32 142.9 116 56.9
TPR.G819 Trifolium pratense HOM05D001605 ORTHO05D003014 3.3e-32 142.9 116 61.2
Cfa018371 Carpinus fangiana HOM05D001605 ORTHO05D003014 4.3e-32 142.5 112 60.7
Haze_17697 Corylus avellana HOM05D001605 ORTHO05D003014 4.3e-32 142.5 112 60.7
Dinv25801 Davidia involucrata HOM05D001605 ORTHO05D003014 4.3e-32 142.5 112 59.8
MD05G1013100 Malus domestica HOM05D001605 ORTHO05D003014 7.3e-32 141.7 116 57.8
AUR62013483 Chenopodium quinoa HOM05D001605 ORTHO05D003014 9.6e-32 141.4 116 57.8
Medtr3g089910 Medicago truncatula HOM05D001605 ORTHO05D003014 9.6e-32 141.4 113 64.6
VMungo1309G2477 Vigna mungo HOM05D001605 ORTHO05D003014 9.6e-32 141.4 112 62.5
Ah.05g167510 Amaranthus hybridus HOM05D001605 ORTHO05D003014 1.3e-31 141.0 112 58.0
DCAR_010233 Daucus carota HOM05D001605 ORTHO05D003014 1.3e-31 141.0 111 58.6
Peaxi162Scf00263g00122 Petunia axillaris HOM05D001605 ORTHO05D003014 1.3e-31 141.0 116 56.0
Phvul.009G134600 Phaseolus vulgaris HOM05D001605 ORTHO05D003014 1.3e-31 141.0 116 61.2
Rhsim06G0090800 Rhododendron simsii HOM05D001605 ORTHO05D003014 1.3e-31 141.0 116 57.8
TWI34G1926 Tripterygium wilfordii HOM05D001605 ORTHO05D003014 1.3e-31 141.0 115 57.4
MD10G1013600 Malus domestica HOM05D001605 ORTHO05D003014 1.6e-31 140.6 116 57.8
Actinidia16593 Actinidia chinensis HOM05D001605 ORTHO05D003014 2.1e-31 140.2 115 53.9
AUR62026789 Chenopodium quinoa HOM05D001605 ORTHO05D003014 2.1e-31 140.2 116 57.8
COL.COLO4_08860 Corchorus olitorius HOM05D001605 ORTHO05D003014 2.1e-31 140.2 112 60.7
Sed0025239 Sechium edule HOM05D001605 ORTHO05D003014 2.1e-31 140.2 116 60.3
Thecc.08G143700 Theobroma cacao HOM05D001605 ORTHO05D003014 2.1e-31 140.2 105 62.9
EL10Ac1g01470 Beta vulgaris HOM05D001605 ORTHO05D003014 3.6e-31 139.4 115 55.7
Duzib116G0915 Durio zibethinus HOM05D001605 ORTHO05D003014 3.6e-31 139.4 112 60.7
FvH4_2g14770 Fragaria vesca HOM05D001605 ORTHO05D003014 4.8e-31 139.0 116 59.5
FAN15G1258 Fragaria x ananassa HOM05D001605 ORTHO05D003014 4.8e-31 139.0 116 59.5
FAN24G3135 Fragaria x ananassa HOM05D001605 ORTHO05D003014 4.8e-31 139.0 116 59.5
Gohir.A05G269500 Gossypium hirsutum HOM05D001605 ORTHO05D003014 4.8e-31 139.0 105 61.0
Gohir.D05G271600 Gossypium hirsutum HOM05D001605 ORTHO05D003014 4.8e-31 139.0 105 61.0
Gorai.009G284500 Gossypium raimondii HOM05D001605 ORTHO05D003014 4.8e-31 139.0 105 61.0
Lj1g0017948 Lotus japonicus HOM05D001605 ORTHO05D003014 4.8e-31 139.0 112 59.8
RcHm_v2.0_Chr6g0277331 Rosa chinensis HOM05D001605 ORTHO05D003014 4.8e-31 139.0 112 59.8
Glyma.04G240900 Glycine max HOM05D001605 ORTHO05D003014 6.2e-31 138.7 112 61.6
Aqoxy3G04296 Aquilegia oxysepala HOM05D001605 ORTHO05D003014 8.1e-31 138.3 112 59.8
HanXRQChr04g0125191 Helianthus annuus HOM05D001605 ORTHO05D003014 8.1e-31 138.3 114 55.3
FAN20G0370 Fragaria x ananassa HOM05D001605 ORTHO05D003014 1.1e-30 137.9 116 58.6
GSVIVG01010022001 Vitis vinifera HOM05D001605 ORTHO05D003014 1.1e-30 137.9 113 56.6
Glyma.06G122500 Glycine max HOM05D001605 ORTHO05D003014 1.8e-30 137.1 112 59.8
TWI60G0151 Tripterygium wilfordii HOM05D001605 ORTHO05D003014 1.8e-30 137.1 105 61.9
Actinidia15162 Actinidia chinensis HOM05D001605 ORTHO05D003014 2.4e-30 136.7 115 53.9
Ciclev10000121m.g Citrus clementina HOM05D001605 ORTHO05D003014 2.4e-30 136.7 112 59.8
Gohir.D02G073200 Gossypium hirsutum HOM05D001605 ORTHO05D003014 3.1e-30 136.3 112 59.8
vmacro21127 Vaccinium macrocarpon HOM05D001605 ORTHO05D003014 4.0e-30 136.0 116 56.9
CDE07G1070 Ceratophyllum demersum HOM05D001605 ORTHO05D003014 5.3e-30 135.6 113 54.0
Gohir.A02G067000 Gossypium hirsutum HOM05D001605 ORTHO05D003014 6.9e-30 135.2 112 60.7
Gorai.005G082600 Gossypium raimondii HOM05D001605 ORTHO05D003014 6.9e-30 135.2 112 58.9
Nitab4.5_0010232g0010 Nicotiana tabacum HOM05D001605 ORTHO05D003014 6.9e-30 135.2 106 58.5
Atru.chr13.1705 Acer truncatum HOM05D001605 ORTHO05D003014 9.0e-30 134.8 115 59.1
Duzib041G0436 Durio zibethinus HOM05D001605 ORTHO05D003014 9.0e-30 134.8 112 59.8
Eucgr.F02745 Eucalyptus grandis HOM05D001605 ORTHO05D003014 9.0e-30 134.8 112 63.4
Medtr1g023870 Medicago truncatula HOM05D001605 ORTHO05D003014 9.0e-30 134.8 112 61.6
ATR0665G314 Amborella trichopoda HOM05D001605 ORTHO05D003014 1.2e-29 134.4 112 55.4
Nitab4.5_0009413g0010 Nicotiana tabacum HOM05D001605 ORTHO05D003014 1.2e-29 134.4 110 56.4
Pp3c16_360 Physcomitrium patens HOM05D001605 ORTHO05D003014 1.5e-29 134.0 105 55.2
Gorai.009G252200 Gossypium raimondii HOM05D001605 ORTHO05D003014 2.6e-29 133.3 112 58.0
Mapoly0027s0102 Marchantia polymorpha HOM05D001605 ORTHO05D003014 3.4e-29 132.9 106 57.5
SEGI_21526 Sequoiadendron giganteum HOM05D001605 ORTHO05D003014 7.6e-29 131.7 111 54.1
Zm00001eb373500 Zea mays HOM05D001605 ORTHO05D003014 9.9e-29 131.3 112 55.4
Gohir.D05G242900 Gossypium hirsutum HOM05D001605 ORTHO05D003014 1.3e-28 131.0 110 56.4
Os06g0208300 Oryza sativa ssp. japonica HOM05D001605 ORTHO05D003014 1.7e-28 130.6 112 55.4
Pp3c25_8110 Physcomitrium patens HOM05D001605 ORTHO05D003014 2.2e-28 130.2 105 53.3
Lsat_1_v5_gn_3_132801 Lactuca sativa HOM05D001605 ORTHO05D003014 2.9e-28 129.8 112 56.2
DCAR_001109 Daucus carota HOM05D001605 ORTHO05D003014 6.4e-28 128.6 111 54.1
PGR042G1363 Punica granatum HOM05D001605 ORTHO05D003014 1.4e-27 127.5 112 56.2
Rhsim12G0009500 Rhododendron simsii HOM05D001605 ORTHO05D003014 4.2e-27 125.9 116 52.6
vmacro01512 Vaccinium macrocarpon HOM05D001605 ORTHO05D003014 7.1e-27 125.2 114 50.0
QL07p038796 Quercus lobata HOM05D001605 ORTHO05D003014 4.6e-26 122.5 113 55.8
QL07p039046 Quercus lobata HOM05D001605 ORTHO05D003014 4.6e-26 122.5 113 55.8
HPP92_021877 Vanilla planifolia HOM05D001605 ORTHO05D003014 2.3e-25 120.2 112 50.9
AT4G08360 Arabidopsis thaliana HOM05D001605 ORTHO05D003014 6.7e-25 118.6 110 58.2
ECA247G0063 Erigeron canadensis HOM05D001605 ORTHO05D003014 1.1e-24 117.9 96 56.2
AagrBONN_evm.TU.Sc2ySwM_369.275 Anthoceros agrestis HOM05D001605 ORTHO05D003014 5.6e-24 115.5 114 47.4
CAN.G1045.24 Capsicum annuum HOM05D001605 ORTHO05D003014 2.1e-23 113.6 97 54.6
ECA240G4004 Erigeron canadensis HOM05D001605 ORTHO05D003014 1.1e-22 111.3 106 50.9
Lsat_1_v5_gn_2_107160 Lactuca sativa HOM05D001605 ORTHO05D003014 9.0e-22 108.2 102 51.0
CBR_g27949 Chara braunii HOM05D001605 ORTHO05D003014 8.4e-20 101.7 106 43.4
QL12p037358 Quercus lobata HOM05D001605 ORTHO05D003014 1.4e-19 100.9 95 52.6
Lsat_1_v5_gn_7_47540 Lactuca sativa HOM05D001605 ORTHO05D003014 4.6e-18 95.9 108 45.4
SMO137G0201 Selaginella moellendorffii HOM05D001605 ORTHO05D003014 1.5e-16 90.9 105 44.8
SMO162G0003 Selaginella moellendorffii HOM05D001605 ORTHO05D003014 2.5e-16 90.1 105 44.8
Sc23g0005020 Simmondsia chinensis HOM05D001605 ORTHO05D003014 4.3e-16 89.4 74 54.1
Hma1.2p1_1530F.1_g289170 Hydrangea macrophylla HOM05D001605 ORTHO05D003014 5.7e-16 89.0 118 45.8
arahy.Tifrunner.gnm1.ann1.0IUR8P Arachis hypogaea HOM05D001605 ORTHO05D003014 6.3e-15 85.5 67 61.2
arahy.Tifrunner.gnm1.ann1.XYB1GT Arachis hypogaea HOM05D001605 ORTHO05D003014 6.3e-15 85.5 67 61.2
Gohir.A05G241600 Gossypium hirsutum HOM05D001605 ORTHO05D003014 1.4e-14 84.3 81 50.6
Mapoly0084s0047 Marchantia polymorpha HOM05D001605 ORTHO05D003014 2.0e-13 80.5 108 34.3
CDE06G0467 Ceratophyllum demersum HOM05D001605 ORTHO05D003014 8.7e-09 65.1 69 44.9


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