Gene: CiPaw.16G018200

General Information

Structural Information

Species Carya illinoinensis
Gene Identifier CiPaw.16G018200
Transcript Identifier CiPaw.16G018200.1
Gene Type Coding gene
Location Chr16 : 2341823-2349758 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001605
#Genes/#Species 401/100
Phylogenetic origin

ID ORTHO05D003014
#Genes/#Species 248/99
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

id CiPaw.16G018200.v1.1
pacid 45843968
locus Caril.16G017700

Descriptions

Short descriptions
Ortholog descriptions

Description K15172 - transcription elongation factor SPT5 (SUPT5H, SPT5)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006357	IEA	InterPro	regulation of transcription by RNA polymerase II
GO:0032784	IEA	InterPro	regulation of DNA-templated transcription, elongation
GO:0006355	IEA	InterPro	regulation of transcription, DNA-templated

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR039385	NGN domain, eukaryotic
IPR041975	Spt5, KOW domain repeat 2
IPR017071	Transcription elongation factor Spt5, eukaryote
IPR014722	Ribosomal protein L2, domain 2
IPR041976	Spt5, KOW domain repeat 3
IPR022581	Spt5 transcription elongation factor, N-terminal
IPR039659	Transcription elongation factor SPT5
IPR005100	NGN domain
IPR041978	Spt5, KOW domain repeat 5
IPR005824	KOW
IPR006645	NusG, N-terminal
IPR036735	NusG, N-terminal domain superfamily
IPR041977	Spt5, KOW domain repeat 4
IPR041980	Spt5, KOW domain repeat 6
IPR008991	Translation protein SH3-like domain superfamily
IPR041973	Spt5, KOW domain repeat 1

Mapman id	Description
15.3.5.3.2	RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.SPT4-SPT5 transcription elongation complex.component SPT5