Gene: Duzib041G0436

General Information

Structural Information

  • Species Durio zibethinus
  • Gene Identifier Duzib041G0436
  • Transcript Identifier Duzib041G0436.01
  • Gene Type Coding gene
  • Location NW_019167826.1 : 6874352-6883434 : positive

Gene Family Information

  • ID HOM05D001605
  • #Genes/#Species 401/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name LOC111298888
  • name XM_022893631.1
  • pid XP_022749366.1
  • id gene-LOC111298888
  • uniprot A0A6P5ZAE2

Descriptions

  • product putative transcription elongation factor SPT5 homolog 1, transcript variant X1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006357
IEA
InterProregulation of transcription by RNA polymerase II
GO:0032784
IEA
GOA Databaseregulation of DNA-templated transcription, elongation
GO:0032784
IEA
InterProregulation of DNA-templated transcription, elongation
GO:0006414
IEA
GOA Databasetranslational elongation
GO:0006412
IEA
GOA Databasetranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003746
IEA
GOA Databasetranslation elongation factor activity
GO:0003735
IEA
GOA Databasestructural constituent of ribosome

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005840
IEA
GOA Databaseribosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041973 Spt5, KOW domain repeat 1
IPR039385 NGN domain, eukaryotic
IPR005100 NGN domain
IPR014722 Ribosomal protein L2, domain 2
IPR008991 Translation protein SH3-like domain superfamily
IPR041976 Spt5, KOW domain repeat 3
IPR041975 Spt5, KOW domain repeat 2
IPR041978 Spt5, KOW domain repeat 5
IPR005824 KOW
IPR006645 NusG, N-terminal
IPR039659 Transcription elongation factor SPT5
IPR017071 Transcription elongation factor Spt5, eukaryote
IPR041977 Spt5, KOW domain repeat 4
IPR036735 NusG, N-terminal domain superfamily
IPR022581 Spt5 transcription elongation factor, N-terminal
IPR041980 Spt5, KOW domain repeat 6
Mapman id Description
15.3.5.3.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.SPT4-SPT5 transcription elongation complex.component SPT5