Gene: Sopen04g026660

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g026660
  • Transcript Identifier Sopen04g026660.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 67673993-67690347 : positive

Gene Family Information

  • ID HOM05D001605
  • #Genes/#Species 401/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g026660.1

Descriptions

  • Description global transcription factor group A2 (GTA2) | FUNCTIONS IN: transcription elongation regulator activity, structural constituent of ribosome, sequence-specific DNA binding transcription factor activity | INVOLVED IN: translation, regulation of transcription from RNA polymerase II promoter, positive regulation of RNA elongation from RNA polymerase II promoter | LOCATED IN: ribosome, intracellular | EXPRESSED IN: guard cell | CONTAINS InterPro DOMAIN/s: Translation protein SH3-like , Transcription elongation factor Spt5 , Transcription antitermination protein, NusG, N-terminal , KOW , Ribosomal protein L24/L26, conserved site , Transcription elongation factor Spt5, NGN domain | BEST Arabidopsis thaliana protein match is: Transcription elongation factor Spt5
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006357
IEA
InterProregulation of transcription by RNA polymerase II
GO:0032784
IEA
InterProregulation of DNA-templated transcription, elongation

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041978 Spt5, KOW domain repeat 5
IPR005824 KOW
IPR014722 Ribosomal protein L2, domain 2
IPR036735 NusG, N-terminal domain superfamily
IPR041977 Spt5, KOW domain repeat 4
IPR039385 NGN domain, eukaryotic
IPR005100 NGN domain
IPR008991 Translation protein SH3-like domain superfamily
IPR041973 Spt5, KOW domain repeat 1
IPR022581 Spt5 transcription elongation factor, N-terminal
IPR039659 Transcription elongation factor SPT5
IPR006645 NusG, N-terminal
IPR017071 Transcription elongation factor Spt5, eukaryote
IPR041976 Spt5, KOW domain repeat 3
IPR041975 Spt5, KOW domain repeat 2
IPR041980 Spt5, KOW domain repeat 6
Mapman id Description
15.3.5.3.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.SPT4-SPT5 transcription elongation complex.component SPT5