Gene: vmacro01512
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro01512
- Transcript Identifier vmacro01512-RA
- Gene Type Coding gene
- Location chr1_Vaccinium_macrocarpon_Stevens_v1 : 12416910-12424536 : negative
Gene Family Information
- ID HOM05D001605
- #Genes/#Species 401/100
- Phylogenetic origin
- ID ORTHO05D003014
- #Genes/#Species 248/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id vmacro01512_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to At4g08350: Putative transcription elongation factor SPT5 homolog 1 (Arabidopsis thaliana OX=3702)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006357 | IEA | InterPro | regulation of transcription by RNA polymerase II | |
| GO:0032784 | IEA | InterPro | regulation of DNA-templated transcription, elongation | |
| GO:0006355 | ISO | PLAZA Homology (enrichment) | regulation of transcription, DNA-templated | HOM05D001605 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR008991 | Translation protein SH3-like domain superfamily |
| IPR005824 | KOW |
| IPR014722 | Ribosomal protein L2, domain 2 |
| IPR041977 | Spt5, KOW domain repeat 4 |
| IPR039659 | Transcription elongation factor SPT5 |
| IPR041980 | Spt5, KOW domain repeat 6 |
| IPR041975 | Spt5, KOW domain repeat 2 |
| IPR041976 | Spt5, KOW domain repeat 3 |
| Mapman id | Description |
|---|---|
| 15.3.5.3.2 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.SPT4-SPT5 transcription elongation complex.component SPT5 |