Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g036020.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.5e-25 118.6 57 100.0
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 2.9e-16 87.8 57 80.7
Potri.019G028101 Populus trichocarpa HOM05D000216 ORTHO05D000634 2.9e-16 87.8 57 80.7
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 2.9e-16 87.8 57 80.7
Nitab4.5_0001761g0260 Nicotiana tabacum HOM05D000216 ORTHO05D000634 3.8e-16 87.4 57 77.2
CAN.G939.14 Capsicum annuum HOM05D000216 ORTHO05D000634 5.0e-16 87.0 57 75.4
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
CAN.G219.17 Capsicum annuum HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
ClCG00G001580 Citrullus lanatus HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
ECA169G0008 Erigeron canadensis HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
Migut.L00290 Erythranthe guttata HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
Gohir.D07G215200 Gossypium hirsutum HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 6.5e-16 86.7 57 78.9
Hma1.2p1_0094F.1_g047104 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
Lsat_1_v5_gn_9_5941 Lactuca sativa HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
Lj2A1237T129 Lonicera japonica HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
Psat4g147920 Pisum sativum HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 6.5e-16 86.7 57 78.9
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.5e-16 86.7 57 78.9
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 1.4e-15 85.5 57 77.2
AL2G20940 Arabidopsis lyrata HOM05D000216 ORTHO05D000634 1.4e-15 85.5 57 77.2
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 1.4e-15 85.5 57 77.2
BcaB03g16406 Brassica carinata HOM05D000216 ORTHO05D000634 1.4e-15 85.5 57 77.2
BcaC05g28801 Brassica carinata HOM05D000216 ORTHO05D000634 1.4e-15 85.5 57 77.2
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 1.4e-15 85.5 57 77.2
BolSC29t60451H Brassica oleracea HOM05D000216 ORTHO05D000634 1.4e-15 85.5 57 77.2
BolSC44t60847H Brassica oleracea HOM05D000216 ORTHO05D000634 1.4e-15 85.5 57 77.2
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 1.4e-15 85.5 57 77.2
BraSC140t45588Z Brassica rapa HOM05D000216 ORTHO05D000634 1.4e-15 85.5 57 77.2
BraSC151t45695Z Brassica rapa HOM05D000216 ORTHO05D000634 1.4e-15 85.5 57 77.2
CARHR281920 Cardamine hirsuta HOM05D000216 ORTHO05D000634 1.4e-15 85.5 57 77.2
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 1.4e-15 85.5 57 77.2
Medtr8g016520 Medicago truncatula HOM05D000216 ORTHO05D000634 1.9e-15 85.1 57 77.2
SGA_v2.0_scaffold119G32687 Striga asiatica HOM05D000216 ORTHO05D000634 1.9e-15 85.1 57 78.9
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 1.9e-15 85.1 57 77.2
Nitab4.5_0002868g0030 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.5e-15 84.7 57 75.4
GSVIVG01032753001 Vitis vinifera HOM05D000216 ORTHO05D000634 2.5e-15 84.7 57 75.4
Actinidia34852 Actinidia chinensis HOM05D000216 ORTHO05D000634 3.2e-15 84.3 57 77.2
arahy.Tifrunner.gnm1.ann1.EC4J9P Arachis hypogaea HOM05D000216 ORTHO05D000941 3.2e-15 84.3 57 77.2
arahy.Tifrunner.gnm1.ann1.L6G3EQ Arachis hypogaea HOM05D000216 ORTHO05D000634 3.2e-15 84.3 57 77.2
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 3.2e-15 84.3 57 77.2
arahy.Tifrunner.gnm1.ann1.TW2HF4 Arachis hypogaea HOM05D000216 ORTHO05D000634 3.2e-15 84.3 57 77.2
COL.COLO4_00652 Corchorus olitorius HOM05D000216 ORTHO05D000634 3.2e-15 84.3 57 77.2
CsaV3_UNG208360 Cucumis sativus L. HOM05D000216 ORTHO05D000634 3.2e-15 84.3 57 77.2
Lalb_Chr09g0335371 Lupinus albus HOM05D000216 ORTHO05D000634 3.2e-15 84.3 56 78.6
Oeu004962.1 Olea europaea HOM05D000216 ORTHO05D000634 3.2e-15 84.3 57 75.4
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 3.2e-15 84.3 57 77.2
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 4.2e-15 84.0 57 75.4
Psat0s5655g0040 Pisum sativum HOM05D000216 ORTHO05D000634 4.2e-15 84.0 57 75.4
Nn3g18112 Nelumbo nucifera HOM05D000216 ORTHO05D000634 5.5e-15 83.6 57 77.2
BolC7t41735H Brassica oleracea HOM05D000216 ORTHO05D000634 7.2e-15 83.2 57 75.4
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 7.2e-15 83.2 57 75.4
ClCG10G014740 Citrullus lanatus HOM05D000216 ORTHO05D000634 1.6e-14 82.0 57 75.4
PGSC0003DMG400020296 Solanum tuberosum HOM05D000216 ORTHO05D000634 1.6e-14 82.0 57 75.4
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 2.1e-14 81.6 57 73.7
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 2.1e-14 81.6 57 73.7
AUR62024082 Chenopodium quinoa HOM05D000216 ORTHO05D000634 2.1e-14 81.6 57 73.7
Ah.03g148650 Amaranthus hybridus HOM05D000216 ORTHO05D000634 3.6e-14 80.9 57 71.9
EL10As27g24246 Beta vulgaris HOM05D000216 ORTHO05D007161 3.6e-14 80.9 57 73.7
AUR62030123 Chenopodium quinoa HOM05D000216 ORTHO05D000634 3.6e-14 80.9 57 73.7
Lalb_Chr13g0292871 Lupinus albus HOM05D000216 ORTHO05D000634 6.1e-14 80.1 56 73.2
Solyc08g028940.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.1e-14 80.1 57 71.9
CAN.G1185.17 Capsicum annuum HOM05D000216 ORTHO05D000634 7.9e-14 79.7 56 75.0
Lalb_Chr22g0361661 Lupinus albus HOM05D000216 ORTHO05D000634 7.9e-14 79.7 56 75.0
Hund25860 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.9e-14 79.7 57 70.2
arahy.Tifrunner.gnm1.ann1.09TZAG Arachis hypogaea HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund08567 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund19315 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund23974 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund25936 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund27453 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund27641 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund27654 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund27671 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund27698 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund27743 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund27765 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund27806 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund27823 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund27839 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund27917 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund27930 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund27945 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28017 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28025 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28059 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28084 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28124 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28130 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28141 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28153 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28162 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28179 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28188 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28209 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28236 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28246 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28259 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28291 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28335 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.0e-13 79.3 57 71.9
Hund28352 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28373 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28399 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28414 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28501 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28617 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28641 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28687 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28698 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28703 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28714 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28807 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28825 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28834 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28905 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28913 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund28985 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund29114 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund29198 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund29206 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund29339 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund29388 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund29479 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund29487 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund29646 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund29744 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund29776 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund29916 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund29987 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund30019 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Hund30537 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-13 79.3 57 71.9
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 1.4e-13 79.0 57 71.9
AUR62042525 Chenopodium quinoa HOM05D000216 ORTHO05D000580 3.0e-13 77.8 57 68.4
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 3.0e-13 77.8 57 70.2
CAN.G124.10 Capsicum annuum HOM05D000216 ORTHO05D000634 1.9e-12 75.1 56 69.6
SEGI_24812 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 2.5e-12 74.7 57 64.9
SEGI_31181 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 2.5e-12 74.7 57 64.9
SEGI_35543 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 2.5e-12 74.7 57 64.9
SEGI_36385 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 2.5e-12 74.7 57 64.9
SEGI_37297 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 9.7e-12 72.8 57 61.4
SEGI_23567 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 1.7e-11 72.0 57 63.2
SEGI_28289 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 1.7e-11 72.0 57 63.2
SMO086G0013 Selaginella moellendorffii HOM05D000216 ORTHO05D000634 2.2e-11 71.6 57 64.9
SEGI_16756 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 2.2e-11 71.6 57 63.2
SEGI_20161 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 2.2e-11 71.6 57 63.2
Oeu062867.1 Olea europaea HOM05D000216 ORTHO05D000634 1.1e-10 69.3 50 74.0
CAN.G100.42 Capsicum annuum HOM05D000216 ORTHO05D000634 2.4e-10 68.2 47 76.6
Psat5g134600 Pisum sativum HOM05D000216 ORTHO05D000634 2.4e-10 68.2 78 55.1
BraSC179t45792Z Brassica rapa HOM05D000216 ORTHO05D000634 4.1e-10 67.4 46 73.9
CAN.G1288.10 Capsicum annuum HOM05D000216 ORTHO05D000634 1.2e-09 65.9 47 74.5
CAN.G1738.9 Capsicum annuum HOM05D000216 ORTHO05D000634 7.7e-09 63.2 47 74.5
Sopen08g009650 Solanum pennellii HOM05D000216 ORTHO05D000634 7.7e-09 63.2 47 72.3
Lalb_Chr07g0192711 Lupinus albus HOM05D000216 ORTHO05D000634 6.5e-08 60.1 47 70.2
Psat0s1150g0080 Pisum sativum HOM05D000216 ORTHO05D000634 1.9e-07 58.5 43 74.4
Oeu050097.1 Olea europaea HOM05D000216 ORTHO05D000634 2.5e-07 58.2 40 77.5
GSVIVG01017094001 Vitis vinifera HOM05D000216 ORTHO05D000634 2.5e-07 58.2 40 77.5
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 3.2e-07 57.8 57 59.6
CAN.G804.1 Capsicum annuum HOM05D000216 ORTHO05D000634 4.2e-07 57.4 47 68.1
Nitab4.5_0000172g0280 Nicotiana tabacum HOM05D000216 ORTHO05D000634 4.2e-07 57.4 47 63.8
MD01G1014400 Malus domestica HOM05D000216 ORTHO05D000634 9.4e-07 56.2 46 65.2


User provided reference genes

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