Gene: Hund08567
General Information
Structural Information
- Species Selenicereus undatus
- Gene Identifier Hund08567
- Transcript Identifier Hund08567-RA
- Gene Type Coding gene
- Location Scaffold_33676 : 85512710-85524478 : positive
Gene Family Information
- ID HOM05D000216
- #Genes/#Species 1874/88
- Phylogenetic origin
- ID ORTHO05D000634
- #Genes/#Species 723/78
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Hund08567-RA
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006351 | IEA | InterPro | transcription, DNA-templated | |
| GO:0015986 | IEA | InterPro | ATP synthesis coupled proton transport | |
| GO:0006412 | IEA | InterPro | translation | |
| GO:0046034 | IEA | InterPro | ATP metabolic process | |
| GO:1902600 | IEA | InterPro | proton transmembrane transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003899 | IEA | InterPro | DNA-directed 5'-3' RNA polymerase activity | |
| GO:0032559 | IEA | InterPro | adenyl ribonucleotide binding | |
| GO:0046933 | IEA | InterPro | proton-transporting ATP synthase activity, rotational mechanism | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0005524 | IEA | InterPro | ATP binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045261 | IEA | InterPro | proton-transporting ATP synthase complex, catalytic core F(1) | |
| GO:0005840 | IEA | InterPro | ribosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006592 | RNA polymerase, N-terminal |
| IPR038120 | RNA polymerase Rpb1, funnel domain superfamily |
| IPR033732 | ATP synthase, F1 complex, alpha subunit nucleotide-binding domain |
| IPR005294 | ATP synthase, F1 complex, alpha subunit |
| IPR035921 | F/V-ATP synthase subunit C superfamily |
| IPR038662 | F1F0 ATP synthase subunit C superfamily |
| IPR023591 | Ribosomal protein S2, flavodoxin-like domain superfamily |
| IPR001865 | Ribosomal protein S2 |
| IPR042102 | RNA polymerase Rpb1, domain 3 superfamily |
| IPR000793 | ATP synthase, alpha subunit, C-terminal |
| IPR000194 | ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain |
| IPR038376 | ATP synthase, alpha subunit, C-terminal domain superfamily |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR007083 | RNA polymerase Rpb1, domain 4 |
| IPR007080 | RNA polymerase Rpb1, domain 1 |
| IPR007081 | RNA polymerase Rpb1, domain 5 |
| IPR000722 | RNA polymerase, alpha subunit |
| IPR036121 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily |
| Mapman id | Description |
|---|---|
| 15.6.1.2.1.3 | RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.core components.core component RpoC1 |