Gene: PGSC0003DMG400020296
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400020296
- Transcript Identifier PGSC0003DMT400052303
- Gene Type Coding gene
- Location ST4.03ch09 : 35552620-35554068 : negative
Gene Family Information
- ID HOM05D000216
- #Genes/#Species 1874/88
- Phylogenetic origin
- ID ORTHO05D000634
- #Genes/#Species 723/78
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- pacid 37455998
- id PGSC0003DMG400020296.v4.03
- uniprot M1BT57
Descriptions
- Description DNA-directed RNA polymerase subunit beta''
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006351 | IEA | GOA Database | transcription, DNA-templated | |
| GO:0006351 | IEA | InterPro | transcription, DNA-templated | |
| GO:0006354 | ISO | PLAZA Integrative Orthology | DNA-templated transcription, elongation | ATCG00170 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003899 | IBA IEA | GOA Database | DNA-directed 5'-3' RNA polymerase activity | |
| GO:0003899 | IEA | InterPro | DNA-directed 5'-3' RNA polymerase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0016779 | IEA | GOA Database | nucleotidyltransferase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | ATCG00170 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | ATCG00170 |
| GO:0042644 | ISO | PLAZA Integrative Orthology | chloroplast nucleoid | ATCG00170 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.6.1.2.1.4 | RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.core components.core component RpoC2 |