Gene: BcaC05g28801

General Information

Structural Information

  • Species Brassica carinata
  • Gene Identifier BcaC05g28801
  • Transcript Identifier BcaC05g28801
  • Gene Type Coding gene
  • Location ChrC05 : 51422377-51424693 : positive

Gene Family Information

  • ID HOM05D000216
  • #Genes/#Species 1874/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006354
ISO
PLAZA Integrative OrthologyDNA-templated transcription, elongation ATCG00180

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding ATCG00180

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma ATCG00170
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast ATCG00180
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid ATCG00180

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR042102 RNA polymerase Rpb1, domain 3 superfamily
IPR007081 RNA polymerase Rpb1, domain 5
IPR007080 RNA polymerase Rpb1, domain 1
IPR006592 RNA polymerase, N-terminal
IPR007066 RNA polymerase Rpb1, domain 3
IPR007083 RNA polymerase Rpb1, domain 4
IPR038120 RNA polymerase Rpb1, funnel domain superfamily
IPR000722 RNA polymerase, alpha subunit
Mapman id Description
15.6.1.2.1.3 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.core components.core component RpoC1