Gene: ECA169G0008
General Information
Structural Information
- Species Erigeron canadensis
- Gene Identifier ECA169G0008
- Transcript Identifier ECA169G0008.1
- Gene Type Coding gene
- Location Conyza_canadensis_unscaffolded:20 : 13677-31190 : negative
Gene Family Information
- ID HOM05D000216
- #Genes/#Species 1874/88
- Phylogenetic origin
- ID ORTHO05D000634
- #Genes/#Species 723/78
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- name g44578
- Alias g44578.t1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006354 | ISO | PLAZA Integrative Orthology | DNA-templated transcription, elongation | ATCG00180 |
GO:0046034 | IEA | InterPro | ATP metabolic process | |
GO:0009772 | IEA | InterPro | photosynthetic electron transport in photosystem II | |
GO:0015986 | IEA | InterPro | ATP synthesis coupled proton transport | |
GO:0006351 | IEA | InterPro | transcription, DNA-templated | |
GO:0006412 | IEA | InterPro | translation | |
GO:1902600 | IEA | InterPro | proton transmembrane transport | |
GO:0019684 | IEA | InterPro | photosynthesis, light reaction | |
GO:0009767 | IEA | InterPro | photosynthetic electron transport chain |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003899 | IEA | InterPro | DNA-directed 5'-3' RNA polymerase activity | |
GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | ATCG00180 |
GO:0045156 | IEA | InterPro | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | |
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0003677 | IEA | InterPro | DNA binding | |
GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
GO:0015078 | IEA | InterPro | proton transmembrane transporter activity | |
GO:0016168 | IEA | InterPro | chlorophyll binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0042644 | ISO | PLAZA Integrative Orthology | chloroplast nucleoid | ATCG00180 |
GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | ATCG00180 |
GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | ATCG00170 |
GO:0045263 | IEA | InterPro | proton-transporting ATP synthase complex, coupling factor F(o) | |
GO:0009521 | IEA | InterPro | photosystem | |
GO:0005840 | IEA | InterPro | ribosome | |
GO:0033177 | IEA | InterPro | proton-transporting two-sector ATPase complex, proton-transporting domain | |
GO:0016020 | IEA | InterPro | membrane |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
IPR036001 | Photosystem antenna protein-like superfamily |
IPR002379 | V-ATPase proteolipid subunit C-like domain |
IPR001865 | Ribosomal protein S2 |
IPR006592 | RNA polymerase, N-terminal |
IPR007080 | RNA polymerase Rpb1, domain 1 |
IPR038120 | RNA polymerase Rpb1, funnel domain superfamily |
IPR038376 | ATP synthase, alpha subunit, C-terminal domain superfamily |
IPR000194 | ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain |
IPR000454 | ATP synthase, F0 complex, subunit C |
IPR000484 | Photosynthetic reaction centre, L/M |
IPR007081 | RNA polymerase Rpb1, domain 5 |
IPR004100 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain |
IPR042102 | RNA polymerase Rpb1, domain 3 superfamily |
IPR023366 | ATP synthase subunit alpha, N-terminal domain-like superfamily |
IPR036854 | Photosystem II protein D1/D2 superfamily |
IPR012756 | DNA-directed RNA polymerase, subunit beta'' |
IPR036121 | ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily |
IPR038662 | F1F0 ATP synthase subunit C superfamily |
IPR000793 | ATP synthase, alpha subunit, C-terminal |
IPR044900 | Photosystem II CP43 reaction centre protein superfamily |
IPR007083 | RNA polymerase Rpb1, domain 4 |
IPR000932 | Photosystem antenna protein-like |
IPR035921 | F/V-ATP synthase subunit C superfamily |
IPR000722 | RNA polymerase, alpha subunit |
IPR023591 | Ribosomal protein S2, flavodoxin-like domain superfamily |
Mapman id | Description |
---|---|
15.6.1.2.1.3 | RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.core components.core component RpoC1 |
15.6.1.2.1.4 | RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.core components.core component RpoC2 |