Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g007260.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.4e-72 275.4 137 100.0
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 5.0e-14 81.6 40 92.5
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 5.0e-14 81.6 40 92.5
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 5.0e-14 81.6 40 92.5
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 5.0e-14 81.6 40 92.5
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 5.0e-14 81.6 40 92.5
Lalb_Chr09g0335371 Lupinus albus HOM05D000216 ORTHO05D000634 1.1e-13 80.5 43 88.4
Actinidia34852 Actinidia chinensis HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
BcaB03g16406 Brassica carinata HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
BcaC05g28801 Brassica carinata HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
BolSC29t60451H Brassica oleracea HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
BolSC29t60573H Brassica oleracea HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
BolSC37t60768H Brassica oleracea HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
BolSC44t60847H Brassica oleracea HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
BolSC45t60876H Brassica oleracea HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
BraSC140t45588Z Brassica rapa HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
BraSC151t45695Z Brassica rapa HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
BraSC179t45792Z Brassica rapa HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
CAN.G219.17 Capsicum annuum HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
CAN.G939.14 Capsicum annuum HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
ClCG00G001580 Citrullus lanatus HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
Lj2A1237T129 Lonicera japonica HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 1.9e-13 79.7 40 90.0
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 1.9e-13 79.7 40 90.0
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 2.5e-13 79.3 40 87.5
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 2.5e-13 79.3 40 87.5
Potri.019G028101 Populus trichocarpa HOM05D000216 ORTHO05D000634 2.5e-13 79.3 40 87.5
AL2G20940 Arabidopsis lyrata HOM05D000216 ORTHO05D000634 3.2e-13 79.0 37 97.3
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 3.2e-13 79.0 37 97.3
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 3.2e-13 79.0 37 97.3
CARHR281920 Cardamine hirsuta HOM05D000216 ORTHO05D000634 3.2e-13 79.0 37 97.3
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 3.2e-13 79.0 37 97.3
ECA169G0008 Erigeron canadensis HOM05D000216 ORTHO05D000634 3.2e-13 79.0 37 97.3
Lsat_1_v5_gn_9_5941 Lactuca sativa HOM05D000216 ORTHO05D000634 3.2e-13 79.0 37 97.3
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 4.2e-13 78.6 40 87.5
COL.COLO4_00652 Corchorus olitorius HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
COL.COLO4_02132 Corchorus olitorius HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 4.2e-13 78.6 37 94.6
Hund08567 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund19315 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund23974 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund25936 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund27453 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund27641 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund27654 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund27671 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund27698 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund27743 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund27765 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund27806 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund27823 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund27839 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund27917 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund27930 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund27945 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28017 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28025 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28059 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28084 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28124 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28130 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28141 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28153 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28162 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28179 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28188 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28209 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28236 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28246 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28259 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28291 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28335 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.2e-13 78.6 40 87.5
Hund28352 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28373 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28399 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28414 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28501 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28617 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28641 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28687 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28698 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28703 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28714 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28807 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28825 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28834 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28905 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28913 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund28985 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund29114 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund29198 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund29206 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund29339 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund29388 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund29479 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund29487 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund29646 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund29744 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund29776 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund29916 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund29987 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund30019 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
Hund30537 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.2e-13 78.6 40 87.5
BolC7t41735H Brassica oleracea HOM05D000216 ORTHO05D000634 5.5e-13 78.2 40 87.5
AUR62030123 Chenopodium quinoa HOM05D000216 ORTHO05D000634 5.5e-13 78.2 40 85.0
Gohir.D07G215200 Gossypium hirsutum HOM05D000216 ORTHO05D000634 5.5e-13 78.2 40 87.5
Hma1.2p1_0094F.1_g047104 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 5.5e-13 78.2 40 87.5
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 7.2e-13 77.8 40 87.5
Medtr8g016520 Medicago truncatula HOM05D000216 ORTHO05D000634 7.2e-13 77.8 40 87.5
SGA_v2.0_scaffold119G32687 Striga asiatica HOM05D000216 ORTHO05D000634 7.2e-13 77.8 40 85.0
Nn3g18112 Nelumbo nucifera HOM05D000216 ORTHO05D000634 9.4e-13 77.4 40 87.5
arahy.Tifrunner.gnm1.ann1.D8GGRD Arachis hypogaea HOM05D000216 ORTHO05D001488 1.2e-12 77.0 37 94.6
arahy.Tifrunner.gnm1.ann1.EC4J9P Arachis hypogaea HOM05D000216 ORTHO05D000941 1.2e-12 77.0 37 94.6
arahy.Tifrunner.gnm1.ann1.L6G3EQ Arachis hypogaea HOM05D000216 ORTHO05D000634 1.2e-12 77.0 37 94.6
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 1.2e-12 77.0 37 94.6
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-12 77.0 40 85.0
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 1.2e-12 77.0 40 85.0
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 1.2e-12 77.0 40 85.0
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 1.2e-12 77.0 36 94.4
AUR62042525 Chenopodium quinoa HOM05D000216 ORTHO05D000580 1.6e-12 76.6 40 82.5
Psat0s5655g0040 Pisum sativum HOM05D000216 ORTHO05D000634 1.6e-12 76.6 40 82.5
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 2.1e-12 76.3 36 94.4
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 2.1e-12 76.3 36 94.4
Nitab4.5_0001761g0260 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.1e-12 76.3 40 85.0
Nitab4.5_0005637g0010 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.1e-12 76.3 40 87.5
Psat2g061440 Pisum sativum HOM05D000216 ORTHO05D000634 2.1e-12 76.3 40 82.5
Psat4g147920 Pisum sativum HOM05D000216 ORTHO05D000634 2.1e-12 76.3 40 82.5
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 2.1e-12 76.3 37 94.6
ClCG10G014740 Citrullus lanatus HOM05D000216 ORTHO05D000634 2.7e-12 75.9 40 87.5
Potri.003G067266 Populus trichocarpa HOM05D000216 ORTHO05D000634 2.7e-12 75.9 36 94.4
AUR62024082 Chenopodium quinoa HOM05D000216 ORTHO05D000634 1.0e-11 73.9 40 80.0
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 1.0e-11 73.9 37 91.9
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 1.0e-11 73.9 36 88.9
GSVIVG01032753001 Vitis vinifera HOM05D000216 ORTHO05D000634 1.0e-11 73.9 39 87.2
Ah.03g148650 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.4e-11 73.6 35 94.3
Oeu004962.1 Olea europaea HOM05D000216 ORTHO05D000634 1.4e-11 73.6 40 82.5
PGSC0003DMG400020296 Solanum tuberosum HOM05D000216 ORTHO05D000634 1.4e-11 73.6 39 87.2
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 1.8e-11 73.2 39 82.1
arahy.Tifrunner.gnm1.ann1.TW2HF4 Arachis hypogaea HOM05D000216 ORTHO05D000634 3.0e-11 72.4 37 89.2
HanXRQChr10g0282551 Helianthus annuus HOM05D000216 ORTHO05D000634 4.0e-11 72.0 37 86.5
Psat7g026760 Pisum sativum HOM05D000216 ORTHO05D000634 4.0e-11 72.0 40 77.5
Migut.B00854 Erythranthe guttata HOM05D000216 ORTHO05D000634 5.2e-11 71.6 43 76.7
Solyc03g095380.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.8e-11 71.2 39 82.1
SEGI_23567 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 1.2e-10 70.5 36 86.1
Lalb_Chr04g0256151 Lupinus albus HOM05D000216 ORTHO05D000634 1.5e-10 70.1 41 78.0
Hund10654 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.5e-10 70.1 40 77.5
Thhalv10023328m.g Eutrema salsugineum HOM05D000216 ORTHO05D000634 2.6e-10 69.3 40 80.0
Nitab4.5_0002868g0030 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.6e-10 69.3 39 76.9
SEGI_16756 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 3.4e-10 68.9 35 85.7
SEGI_21436 Sequoiadendron giganteum HOM05D000216 ORTHO05D015708 3.4e-10 68.9 35 85.7
SEGI_24812 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 3.4e-10 68.9 35 85.7
SEGI_31181 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 3.4e-10 68.9 35 85.7
SEGI_35543 Sequoiadendron giganteum HOM05D000216 ORTHO05D003518 3.4e-10 68.9 35 85.7
SEGI_36385 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 3.4e-10 68.9 35 85.7
SEGI_37297 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 3.4e-10 68.9 35 85.7
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 7.5e-10 67.8 36 80.6
Lalb_Chr07g0192721 Lupinus albus HOM05D000216 ORTHO05D000634 9.8e-10 67.4 33 93.9
SEGI_20161 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 2.2e-09 66.2 35 80.0
EL10As27g24247 Beta vulgaris HOM05D000216 ORTHO05D000634 2.8e-09 65.9 34 85.3
Solyc08g028940.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.1e-08 63.9 30 96.7
Lalb_Chr13g0292871 Lupinus albus HOM05D000216 ORTHO05D000634 1.8e-08 63.2 47 63.8
MELO3C027682.2 Cucumis melo HOM05D000216 ORTHO05D000634 2.4e-08 62.8 32 87.5
MELO3C027778.2 Cucumis melo HOM05D000216 ORTHO05D000634 2.4e-08 62.8 32 87.5
Oeu010679.1 Olea europaea HOM05D000216 ORTHO05D000634 5.4e-08 61.6 33 81.8
Migut.D01415 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.6e-07 60.1 31 80.6
Peaxi162Scf00039g01217 Petunia axillaris HOM05D000216 ORTHO05D000634 2.7e-07 59.3 30 86.7
SMO086G0013 Selaginella moellendorffii HOM05D000216 ORTHO05D000634 3.5e-07 58.9 35 68.6
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 2.9e-06 55.8 28 85.7


User provided reference genes

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