Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26834 Sequoiadendron giganteum HOM05D003820 ORTHO05D004540 7.3e-77 290.8 185 100.0
ATR0712G044 Amborella trichopoda HOM05D003820 ORTHO05D004540 1.4e-56 223.4 147 78.2
CDE07G0952 Ceratophyllum demersum HOM05D003820 ORTHO05D004540 1.4e-56 223.4 153 70.6
CDE04G0225 Ceratophyllum demersum HOM05D003820 ORTHO05D004540 4.6e-55 218.4 160 74.4
Phvul.008G270100 Phaseolus vulgaris HOM05D003820 ORTHO05D004540 6.7e-54 214.5 114 84.2
TAR626G0254 Trochodendron aralioides HOM05D003820 ORTHO05D004540 6.7e-54 214.5 103 93.2
VMungo0647G1639 Vigna mungo HOM05D003820 ORTHO05D004540 1.1e-53 213.8 114 86.0
Phvul.007G152400 Phaseolus vulgaris HOM05D003820 ORTHO05D004540 1.5e-53 213.4 115 86.1
Ciclev10004667m.g Citrus clementina HOM05D003820 ORTHO05D004540 1.9e-53 213.0 104 94.2
Lj2g0013565 Lotus japonicus HOM05D003820 ORTHO05D004540 1.9e-53 213.0 103 93.2
Lj6g0008289 Lotus japonicus HOM05D003820 ORTHO05D004540 1.9e-53 213.0 103 93.2
Duzib192G0171 Durio zibethinus HOM05D003820 ORTHO05D004540 3.3e-53 212.2 104 90.4
Lalb_Chr03g0038011 Lupinus albus HOM05D003820 ORTHO05D004540 3.3e-53 212.2 112 86.6
HPP92_017772 Vanilla planifolia HOM05D003820 ORTHO05D004540 3.3e-53 212.2 115 86.1
Glyma.10G073300 Glycine max HOM05D003820 ORTHO05D004540 4.3e-53 211.8 100 95.0
Duzib235G0001 Durio zibethinus HOM05D003820 ORTHO05D004540 5.7e-53 211.5 104 90.4
MD10G1331700 Malus domestica HOM05D003820 ORTHO05D004540 5.7e-53 211.5 106 88.7
Psat7g171280 Pisum sativum HOM05D003820 ORTHO05D004540 5.7e-53 211.5 114 84.2
Cpa.g.sc109.41 Carica papaya HOM05D003820 ORTHO05D004540 7.4e-53 211.1 103 92.2
ClCG01G010210 Citrullus lanatus HOM05D003820 ORTHO05D004540 7.4e-53 211.1 105 90.5
PSO675G6471 Papaver somniferum HOM05D003820 ORTHO05D004540 7.4e-53 211.1 103 91.3
PGR042G2289 Punica granatum HOM05D003820 ORTHO05D004540 7.4e-53 211.1 112 87.5
Rhsim02G0099100 Rhododendron simsii HOM05D003820 ORTHO05D004540 7.4e-53 211.1 103 91.3
Actinidia39270 Actinidia chinensis HOM05D003820 ORTHO05D004540 9.6e-53 210.7 103 90.3
ECA233G4304 Erigeron canadensis HOM05D003820 ORTHO05D004540 9.6e-53 210.7 103 90.3
Gohir.A06G153180 Gossypium hirsutum HOM05D003820 ORTHO05D004540 9.6e-53 210.7 103 92.2
Gorai.010G186600 Gossypium raimondii HOM05D003820 ORTHO05D004540 9.6e-53 210.7 103 92.2
vmacro15759 Vaccinium macrocarpon HOM05D003820 ORTHO05D004540 9.6e-53 210.7 139 79.9
Ca_00446_v3 Cicer arietinum L. HOM05D003820 ORTHO05D004540 1.3e-52 210.3 103 91.3
Lsat_1_v5_gn_7_13661 Lactuca sativa HOM05D003820 ORTHO05D004540 1.3e-52 210.3 103 91.3
PGR102G0671 Punica granatum HOM05D003820 ORTHO05D004540 1.3e-52 210.3 112 87.5
Sed0023864 Sechium edule HOM05D003820 ORTHO05D004540 1.3e-52 210.3 114 83.3
Thecc.06G233400 Theobroma cacao HOM05D003820 ORTHO05D004540 1.3e-52 210.3 119 80.7
CSS0023179 Camellia sinensis var. sinensis HOM05D003820 ORTHO05D004540 1.6e-52 209.9 167 62.9
Dinv07403 Davidia involucrata HOM05D003820 ORTHO05D004540 1.6e-52 209.9 103 90.3
CsaV3_1G017170 Cucumis sativus L. HOM05D003820 ORTHO05D004540 2.1e-52 209.5 128 82.0
Sc17g0007740 Simmondsia chinensis HOM05D003820 ORTHO05D004540 2.1e-52 209.5 103 90.3
CANSAT56G3158 Cannabis sativa HOM05D003820 ORTHO05D004540 2.8e-52 209.1 116 83.6
FAN21G2909 Fragaria x ananassa HOM05D003820 ORTHO05D004540 2.8e-52 209.1 148 73.6
Glyma.13G154200 Glycine max HOM05D003820 ORTHO05D004540 2.8e-52 209.1 114 85.1
Gohir.A06G205300 Gossypium hirsutum HOM05D003820 ORTHO05D004540 2.8e-52 209.1 103 90.3
Gorai.010G250000 Gossypium raimondii HOM05D003820 ORTHO05D004540 2.8e-52 209.1 103 90.3
MD05G1357700 Malus domestica HOM05D003820 ORTHO05D004540 2.8e-52 209.1 106 87.7
MELO3C025562.2 Cucumis melo HOM05D003820 ORTHO05D004540 3.7e-52 208.8 103 91.3
Medtr4g077490 Medicago truncatula HOM05D003820 ORTHO05D004540 3.7e-52 208.8 103 91.3
COL.COLO4_19462 Corchorus olitorius HOM05D003820 ORTHO05D004540 4.8e-52 208.4 100 93.0
Gohir.D06G159900 Gossypium hirsutum HOM05D003820 ORTHO05D004540 4.8e-52 208.4 103 91.3
Lj2A261T37 Lonicera japonica HOM05D003820 ORTHO05D004540 4.8e-52 208.4 99 92.9
THA.LOC104812993 Tarenaya hassleriana HOM05D003820 ORTHO05D004540 4.8e-52 208.4 103 90.3
Nn1g07382 Nelumbo nucifera HOM05D003820 ORTHO05D004540 6.3e-52 208.0 105 88.6
FvH4_3g00980 Fragaria vesca HOM05D003820 ORTHO05D004540 8.2e-52 207.6 168 63.7
Hund23407 Selenicereus undatus HOM05D003820 ORTHO05D004540 8.2e-52 207.6 104 88.5
TPR.G29505 Trifolium pratense HOM05D003820 ORTHO05D004540 8.2e-52 207.6 103 90.3
Atru.chr1.2449 Acer truncatum HOM05D003820 ORTHO05D004540 1.1e-51 207.2 138 71.0
Ah.14g087640 Amaranthus hybridus HOM05D003820 ORTHO05D004540 1.1e-51 207.2 103 88.3
Eucgr.H03283 Eucalyptus grandis HOM05D003820 ORTHO05D004540 1.1e-51 207.2 100 92.0
Gohir.D06G216200 Gossypium hirsutum HOM05D003820 ORTHO05D004540 1.1e-51 207.2 103 89.3
Os09g0407900 Oryza sativa ssp. japonica HOM05D003820 ORTHO05D004540 1.1e-51 207.2 114 83.3
Atru.chr1.2452 Acer truncatum HOM05D003820 ORTHO05D004540 1.4e-51 206.8 100 91.0
Pp3c2_2850 Physcomitrium patens HOM05D003820 ORTHO05D004540 1.4e-51 206.8 101 92.1
AagrBONN_evm.TU.Sc2ySwM_344.5496 Anthoceros agrestis HOM05D003820 ORTHO05D004540 1.8e-51 206.5 157 66.2
FAN25G1165 Fragaria x ananassa HOM05D003820 ORTHO05D004540 1.8e-51 206.5 152 65.8
HanXRQChr05g0129131 Helianthus annuus HOM05D003820 ORTHO05D004540 1.8e-51 206.5 103 88.3
RcHm_v2.0_Chr5g0001501 Rosa chinensis HOM05D003820 ORTHO05D004540 1.8e-51 206.5 113 83.2
DCAR_008620 Daucus carota HOM05D003820 ORTHO05D004540 2.4e-51 206.1 171 61.4
Prupe.4G010400 Prunus persica HOM05D003820 ORTHO05D004540 2.4e-51 206.1 103 88.3
QL05p069714 Quercus lobata HOM05D003820 ORTHO05D004540 4.1e-51 205.3 103 90.3
Zm00001eb225610 Zea mays HOM05D003820 ORTHO05D004540 4.1e-51 205.3 104 87.5
MSTRG.16027 Avicennia marina HOM05D003820 ORTHO05D004540 5.3e-51 204.9 103 90.3
EL10Ac8g20189 Beta vulgaris HOM05D003820 ORTHO05D004540 5.3e-51 204.9 103 87.4
SMO118G0007 Selaginella moellendorffii HOM05D003820 ORTHO05D004540 5.3e-51 204.9 112 82.1
CAN.G1299.7 Capsicum annuum HOM05D003820 ORTHO05D004540 9.0e-51 204.1 166 63.9
C01p16620 Brassica napus HOM05D003820 ORTHO05D004540 1.5e-50 203.4 112 81.2
BolC1t01609H Brassica oleracea HOM05D003820 ORTHO05D004540 1.5e-50 203.4 112 81.2
CiPaw.10G077900 Carya illinoinensis HOM05D003820 ORTHO05D004540 1.5e-50 203.4 111 85.6
Migut.M01395 Erythranthe guttata HOM05D003820 ORTHO05D004540 2.6e-50 202.6 100 90.0
Potri.006G010100 Populus trichocarpa HOM05D003820 ORTHO05D004540 2.6e-50 202.6 104 88.5
AUR62021859 Chenopodium quinoa HOM05D003820 ORTHO05D004540 3.4e-50 202.2 106 84.0
COL.COLO4_14642 Corchorus olitorius HOM05D003820 ORTHO05D004540 3.4e-50 202.2 98 90.8
Nitab4.5_0000443g0170 Nicotiana tabacum HOM05D003820 ORTHO05D004540 3.4e-50 202.2 109 87.2
Nitab4.5_0008965g0020 Nicotiana tabacum HOM05D003820 ORTHO05D004540 3.4e-50 202.2 109 87.2
Aqoxy3G02484 Aquilegia oxysepala HOM05D003820 ORTHO05D004540 4.5e-50 201.8 103 87.4
Haze_06920 Corylus avellana HOM05D003820 ORTHO05D004540 5.9e-50 201.4 103 88.3
Mapoly0061s0070 Marchantia polymorpha HOM05D003820 ORTHO05D004540 5.9e-50 201.4 139 69.8
Sp7g20480 Schrenkiella parvula HOM05D003820 ORTHO05D004540 5.9e-50 201.4 139 68.3
Thhalv10024723m.g Eutrema salsugineum HOM05D003820 ORTHO05D004540 7.6e-50 201.1 113 81.4
Potri.016G014000 Populus trichocarpa HOM05D003820 ORTHO05D004540 7.6e-50 201.1 97 92.8
Sabra16G0001800 Salix brachista HOM05D003820 ORTHO05D004540 7.6e-50 201.1 97 92.8
Sabra16G0016300 Salix brachista HOM05D003820 ORTHO05D004540 7.6e-50 201.1 97 92.8
Solyc02g068480.3 Solanum lycopersicum HOM05D003820 ORTHO05D004540 7.6e-50 201.1 163 63.8
Sopen02g017620 Solanum pennellii HOM05D003820 ORTHO05D004540 7.6e-50 201.1 163 63.8
CARHR229260 Cardamine hirsuta HOM05D003820 ORTHO05D004540 1.0e-49 200.7 112 79.5
Manes.01G126900 Manihot esculenta HOM05D003820 ORTHO05D004540 1.0e-49 200.7 105 87.6
Manes.02G083800 Manihot esculenta HOM05D003820 ORTHO05D004540 1.0e-49 200.7 104 85.6
unitig_62.g23505 Utricularia gibba HOM05D003820 ORTHO05D004540 1.0e-49 200.7 104 89.4
BraA01t01316Z Brassica rapa HOM05D003820 ORTHO05D004540 1.3e-49 200.3 104 85.6
FvH4_6g03150 Fragaria vesca HOM05D003820 ORTHO05D004540 1.3e-49 200.3 102 85.3
FAN14G5460 Fragaria x ananassa HOM05D003820 ORTHO05D004540 1.3e-49 200.3 102 85.3
Medtr4g077320 Medicago truncatula HOM05D003820 ORTHO05D004540 1.3e-49 200.3 104 87.5
Peaxi162Scf00199g00923 Petunia axillaris HOM05D003820 ORTHO05D004540 1.3e-49 200.3 103 88.3
Sabra06G0008300 Salix brachista HOM05D003820 ORTHO05D004540 1.3e-49 200.3 98 92.9
Aa31LG6G4450 Aethionema arabicum HOM05D003820 ORTHO05D004540 1.7e-49 199.9 103 85.4
AL7G31260 Arabidopsis lyrata HOM05D003820 ORTHO05D004540 1.7e-49 199.9 103 86.4
AT4G22285 Arabidopsis thaliana HOM05D003820 ORTHO05D004540 1.7e-49 199.9 100 89.0
AT4G22350 Arabidopsis thaliana HOM05D003820 ORTHO05D004540 1.7e-49 199.9 103 86.4
BcaNung01693 Brassica carinata HOM05D003820 ORTHO05D004540 1.7e-49 199.9 103 86.4
BcaNung02500 Brassica carinata HOM05D003820 ORTHO05D004540 1.7e-49 199.9 103 86.4
A01p13710 Brassica napus HOM05D003820 ORTHO05D004540 1.7e-49 199.9 103 86.4
A03p53480 Brassica napus HOM05D003820 ORTHO05D004540 1.7e-49 199.9 103 86.4
C07p51810 Brassica napus HOM05D003820 ORTHO05D004540 1.7e-49 199.9 103 86.4
BraA03t14414Z Brassica rapa HOM05D003820 ORTHO05D004540 1.7e-49 199.9 103 86.4
Carub.0007s1895 Capsella rubella HOM05D003820 ORTHO05D004540 1.7e-49 199.9 100 89.0
BolC7t45683H Brassica oleracea HOM05D003820 ORTHO05D004540 6.5e-49 198.0 103 85.4
SHI24460 Sapria himalayana HOM05D003820 ORTHO05D004540 8.5e-49 197.6 95 92.6
PGSC0003DMG400009435 Solanum tuberosum HOM05D003820 ORTHO05D004540 1.1e-48 197.2 103 86.4
A06p15880 Brassica napus HOM05D003820 ORTHO05D004540 1.9e-48 196.4 114 78.1
BraA06t24699Z Brassica rapa HOM05D003820 ORTHO05D004540 1.9e-48 196.4 114 78.1
CBR_g53671 Chara braunii HOM05D003820 ORTHO05D004540 9.3e-48 194.1 114 75.4
Lj2C282T7 Lonicera japonica HOM05D003820 ORTHO05D004540 4.6e-47 191.8 107 80.4
Lj6P617T46 Lonicera japonica HOM05D003820 ORTHO05D004540 1.1e-45 187.2 95 86.3
HanXRQChr03g0086431 Helianthus annuus HOM05D003820 ORTHO05D004540 2.5e-45 186.0 103 83.5
HanXRQChr03g0086471 Helianthus annuus HOM05D003820 ORTHO05D004540 2.5e-45 186.0 103 83.5
HanXRQChr03g0086481 Helianthus annuus HOM05D003820 ORTHO05D004540 5.7e-45 184.9 103 82.5
PSO541G5704 Papaver somniferum HOM05D003820 ORTHO05D004540 5.3e-43 178.3 83 95.2
TPR.G23689 Trifolium pratense HOM05D003820 ORTHO05D004540 1.5e-42 176.8 94 87.2
Hma1.2p1_2009F.1_g310970 Hydrangea macrophylla HOM05D003820 ORTHO05D004540 2.2e-41 172.9 90 85.6
Haze_06925 Corylus avellana HOM05D003820 ORTHO05D004540 2.9e-41 172.6 83 92.8
Nitab4.5_0001735g0140 Nicotiana tabacum HOM05D003820 ORTHO05D004540 3.8e-41 172.2 97 77.3
QL10p037768 Quercus lobata HOM05D003820 ORTHO05D004540 5.0e-41 171.8 82 92.7
Peaxi162Scf00177g00115 Petunia axillaris HOM05D003820 ORTHO05D004540 3.2e-40 169.1 105 77.1
AUR62012795 Chenopodium quinoa HOM05D003820 ORTHO05D004540 7.2e-40 167.9 81 88.9
COL.COLO4_04224 Corchorus olitorius HOM05D003820 ORTHO05D004540 2.6e-37 159.5 108 67.6
MCO11G519 Micromonas commoda HOM05D003820 ORTHO05D004540 7.4e-37 157.9 104 68.3
Peaxi162Scf00610g00120 Petunia axillaris HOM05D003820 ORTHO05D004540 7.4e-37 157.9 83 84.3
SGA_v2.0_scaffold4G01876 Striga asiatica HOM05D003820 ORTHO05D004540 1.3e-36 157.1 83 86.7
Aqoxy5G01269 Aquilegia oxysepala HOM05D003820 ORTHO05D004540 3.7e-36 155.6 96 71.9
Duzib264G0116 Durio zibethinus HOM05D003820 ORTHO05D004540 1.4e-35 153.7 91 79.1
FAN09G3292 Fragaria x ananassa HOM05D003820 ORTHO05D004540 1.5e-34 150.2 77 87.0
Haze_26297 Corylus avellana HOM05D003820 ORTHO05D004540 7.7e-34 147.9 94 67.0
Cfa027151 Carpinus fangiana HOM05D003820 ORTHO05D004540 5.0e-33 145.2 90 70.0
AUR62017961 Chenopodium quinoa HOM05D003820 ORTHO05D004540 6.5e-33 144.8 92 70.7
AUR62014154 Chenopodium quinoa HOM05D003820 ORTHO05D004540 5.5e-32 141.7 105 61.9
Hma1.2p1_0657F.1_g197170 Hydrangea macrophylla HOM05D003820 ORTHO05D004540 2.3e-30 136.3 99 65.7
PRCOL_00000942 Prasinoderma coloniale HOM05D003820 ORTHO05D004540 1.1e-27 127.5 95 57.9
TPR.G33399 Trifolium pratense HOM05D003820 ORTHO05D004540 3.5e-26 122.5 98 60.2
Cc09_g00870 Coffea canephora HOM05D003820 ORTHO05D004540 3.8e-25 119.0 103 58.3
HanXRQChr03g0086521 Helianthus annuus HOM05D003820 ORTHO05D004540 1.5e-24 117.1 59 84.7
RcHm_v2.0_Chr4g0397451 Rosa chinensis HOM05D003820 ORTHO05D004540 2.7e-23 112.8 94 57.4
FAN02G3088 Fragaria x ananassa HOM05D003820 ORTHO05D004540 4.4e-21 105.5 51 88.2
CiPaw.09G102300 Carya illinoinensis HOM05D003820 ORTHO05D004540 1.6e-18 97.1 100 54.0
COL.COLO4_11384 Corchorus olitorius HOM05D002880 ORTHO05D003450 6.8e-14 81.6 62 64.5
arahy.Tifrunner.gnm1.ann1.7FS7F8 Arachis hypogaea HOM05D003820 ORTHO05D004540 4.4e-13 79.0 49 75.5
Oeu015944.1 Olea europaea HOM05D003820 ORTHO05D004540 7.5e-13 78.2 38 89.5


User provided reference genes

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