Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_21526 Sequoiadendron giganteum HOM05D001605 ORTHO05D003014 1.1e-128 463.4 250 100.0
CDE07G1070 Ceratophyllum demersum HOM05D001605 ORTHO05D003014 1.2e-74 283.9 219 67.1
MBI04_g13672_MAGBIO Magnolia biondii HOM05D001605 ORTHO05D003014 3.5e-74 282.3 220 67.3
PSO063G1730 Papaver somniferum HOM05D001605 ORTHO05D003014 1.5e-69 266.9 220 68.2
PSO782G0565 Papaver somniferum HOM05D001605 ORTHO05D003014 1.5e-69 266.9 220 68.2
ClCG08G006430 Citrullus lanatus HOM05D001605 ORTHO05D003014 1.7e-68 263.5 220 65.9
CsaV3_6G031000 Cucumis sativus L. HOM05D001605 ORTHO05D003014 1.7e-68 263.5 220 65.9
CARHR259450 Cardamine hirsuta HOM05D001605 ORTHO05D003014 4.2e-67 258.8 216 62.0
HanXRQChr04g0125191 Helianthus annuus HOM05D001605 ORTHO05D003014 5.5e-67 258.5 222 62.6
Nn5g28614 Nelumbo nucifera HOM05D001605 ORTHO05D003014 5.5e-67 258.5 221 66.5
Carub.0006s2691 Capsella rubella HOM05D001605 ORTHO05D003014 7.1e-67 258.1 216 61.6
Potri.004G162500 Populus trichocarpa HOM05D001605 ORTHO05D003014 1.2e-66 257.3 224 62.9
Hund26733 Selenicereus undatus HOM05D001605 ORTHO05D003014 1.2e-66 257.3 219 60.7
CiPaw.16G018200 Carya illinoinensis HOM05D001605 ORTHO05D003014 3.5e-66 255.8 219 64.4
TWI34G1926 Tripterygium wilfordii HOM05D001605 ORTHO05D003014 6.0e-66 255.0 220 65.5
Lj4C691T3 Lonicera japonica HOM05D001605 ORTHO05D003014 7.9e-66 254.6 224 64.3
DCAR_010233 Daucus carota HOM05D001605 ORTHO05D003014 1.3e-65 253.8 223 64.6
Aqoxy3G04296 Aquilegia oxysepala HOM05D001605 ORTHO05D003014 1.8e-65 253.4 225 64.9
MD05G1013100 Malus domestica HOM05D001605 ORTHO05D003014 2.3e-65 253.1 220 65.0
Cfa018371 Carpinus fangiana HOM05D001605 ORTHO05D003014 3.9e-65 252.3 220 64.5
Haze_17697 Corylus avellana HOM05D001605 ORTHO05D003014 3.9e-65 252.3 220 64.5
TAR625G1035 Trochodendron aralioides HOM05D001605 ORTHO05D003014 5.1e-65 251.9 222 65.8
Lalb_Chr23g0271331 Lupinus albus HOM05D001605 ORTHO05D003014 6.7e-65 251.5 220 64.5
Psat5g080840 Pisum sativum HOM05D001605 ORTHO05D003014 6.7e-65 251.5 220 65.0
Hma1.2p1_0107F.1_g051400 Hydrangea macrophylla HOM05D001605 ORTHO05D003014 1.1e-64 250.8 231 62.3
Dinv25801 Davidia involucrata HOM05D001605 ORTHO05D003014 1.5e-64 250.4 221 61.5
Manes.18G086700 Manihot esculenta HOM05D001605 ORTHO05D003014 1.5e-64 250.4 219 64.4
HPP92_021877 Vanilla planifolia HOM05D001605 ORTHO05D003014 2.5e-64 249.6 220 63.2
RcHm_v2.0_Chr6g0277331 Rosa chinensis HOM05D001605 ORTHO05D003014 4.3e-64 248.8 219 63.0
FAN20G0370 Fragaria x ananassa HOM05D001605 ORTHO05D003014 5.6e-64 248.4 219 63.5
Lalb_Chr11g0066411 Lupinus albus HOM05D001605 ORTHO05D003014 5.6e-64 248.4 220 63.2
Prupe.8G018000 Prunus persica HOM05D001605 ORTHO05D003014 5.6e-64 248.4 222 64.0
Nitab4.5_0000445g0150 Nicotiana tabacum HOM05D001605 ORTHO05D003014 7.4e-64 248.1 222 64.9
Cpa.g.sc188.8 Carica papaya HOM05D001605 ORTHO05D003014 9.6e-64 247.7 220 62.7
FAN15G1258 Fragaria x ananassa HOM05D001605 ORTHO05D003014 9.6e-64 247.7 219 63.0
Peaxi162Scf00263g00122 Petunia axillaris HOM05D001605 ORTHO05D003014 9.6e-64 247.7 222 64.0
FvH4_2g14770 Fragaria vesca HOM05D001605 ORTHO05D003014 1.3e-63 247.3 219 63.0
FAN24G3135 Fragaria x ananassa HOM05D001605 ORTHO05D003014 1.3e-63 247.3 219 63.0
Lalb_Chr08g0240791 Lupinus albus HOM05D001605 ORTHO05D003014 1.6e-63 246.9 220 62.3
MD10G1013600 Malus domestica HOM05D001605 ORTHO05D003014 1.6e-63 246.9 220 64.1
TWI60G0151 Tripterygium wilfordii HOM05D001605 ORTHO05D003014 2.1e-63 246.5 223 64.6
MSTRG.1376 Avicennia marina HOM05D001605 ORTHO05D003014 2.8e-63 246.1 219 63.5
Sed0025239 Sechium edule HOM05D001605 ORTHO05D003014 2.8e-63 246.1 220 64.1
Os06g0208300 Oryza sativa ssp. japonica HOM05D001605 ORTHO05D003014 4.8e-63 245.4 222 63.5
TAR381G0699 Trochodendron aralioides HOM05D001605 ORTHO05D003014 8.1e-63 244.6 222 62.6
GSVIVG01010022001 Vitis vinifera HOM05D001605 ORTHO05D003014 8.1e-63 244.6 222 65.8
Ah.05g167510 Amaranthus hybridus HOM05D001605 ORTHO05D003014 2.4e-62 243.0 220 61.8
Nitab4.5_0009413g0010 Nicotiana tabacum HOM05D001605 ORTHO05D003014 2.4e-62 243.0 219 63.9
Thecc.08G143700 Theobroma cacao HOM05D001605 ORTHO05D003014 3.1e-62 242.7 219 63.9
ATR0665G314 Amborella trichopoda HOM05D001605 ORTHO05D003014 4.0e-62 242.3 203 68.0
Aa31LG9G14140 Aethionema arabicum HOM05D001605 ORTHO05D003014 6.9e-62 241.5 216 57.4
Solyc04g064700.4 Solanum lycopersicum HOM05D001605 ORTHO05D003014 6.9e-62 241.5 220 64.1
Sopen04g026660 Solanum pennellii HOM05D001605 ORTHO05D003014 6.9e-62 241.5 220 64.1
Gohir.A02G067000 Gossypium hirsutum HOM05D001605 ORTHO05D003014 9.0e-62 241.1 221 63.8
Gohir.A05G269500 Gossypium hirsutum HOM05D001605 ORTHO05D003014 1.5e-61 240.4 222 64.4
Gohir.D05G271600 Gossypium hirsutum HOM05D001605 ORTHO05D003014 1.5e-61 240.4 222 64.4
Lsat_1_v5_gn_3_132801 Lactuca sativa HOM05D001605 ORTHO05D003014 1.5e-61 240.4 229 60.3
Atru.chr13.1705 Acer truncatum HOM05D001605 ORTHO05D003014 2.0e-61 240.0 223 63.7
CANSAT25G3051 Cannabis sativa HOM05D001605 ORTHO05D003014 7.6e-61 238.0 220 60.9
AT4G08350 Arabidopsis thaliana HOM05D001605 ORTHO05D003014 1.3e-60 237.3 216 58.8
AL6G42110 Arabidopsis lyrata HOM05D001605 ORTHO05D003014 1.7e-60 236.9 216 58.8
Gohir.D02G073200 Gossypium hirsutum HOM05D001605 ORTHO05D003014 1.7e-60 236.9 218 61.5
Gorai.005G082600 Gossypium raimondii HOM05D001605 ORTHO05D003014 1.7e-60 236.9 221 62.4
Duzib041G0436 Durio zibethinus HOM05D001605 ORTHO05D003014 2.2e-60 236.5 219 63.0
Gorai.009G284500 Gossypium raimondii HOM05D001605 ORTHO05D003014 2.2e-60 236.5 223 64.1
Duzib116G0915 Durio zibethinus HOM05D001605 ORTHO05D003014 3.8e-60 235.7 219 62.6
ECA247G0063 Erigeron canadensis HOM05D001605 ORTHO05D003014 8.4e-60 234.6 206 63.6
Potri.009G124200 Populus trichocarpa HOM05D001605 ORTHO05D003014 1.1e-59 234.2 220 60.9
Gorai.009G252200 Gossypium raimondii HOM05D001605 ORTHO05D003014 1.9e-59 233.4 222 60.4
PGR042G1363 Punica granatum HOM05D001605 ORTHO05D003014 1.9e-59 233.4 218 61.0
THA.LOC104798874 Tarenaya hassleriana HOM05D001605 ORTHO05D003014 1.9e-59 233.4 207 57.0
unitig_748.g7696 Utricularia gibba HOM05D001605 ORTHO05D003014 1.9e-59 233.4 222 59.9
Gohir.D05G242900 Gossypium hirsutum HOM05D001605 ORTHO05D003014 5.5e-59 231.9 222 60.4
DCAR_001109 Daucus carota HOM05D001605 ORTHO05D003014 9.3e-59 231.1 222 58.1
Glyma.04G240900 Glycine max HOM05D001605 ORTHO05D003014 9.3e-59 231.1 220 60.9
BcaC01g04775 Brassica carinata HOM05D001605 ORTHO05D003014 1.6e-58 230.3 216 56.9
A03p27980 Brassica napus HOM05D001605 ORTHO05D003014 1.6e-58 230.3 216 56.5
C03p33860 Brassica napus HOM05D001605 ORTHO05D003014 1.6e-58 230.3 216 56.9
BolC3t15701H Brassica oleracea HOM05D001605 ORTHO05D003014 1.6e-58 230.3 216 56.9
BraA03t12015Z Brassica rapa HOM05D001605 ORTHO05D003014 1.6e-58 230.3 216 56.5
Lj1g0017948 Lotus japonicus HOM05D001605 ORTHO05D003014 3.5e-58 229.2 220 60.0
BcaB01g01341 Brassica carinata HOM05D001605 ORTHO05D003014 7.9e-58 228.0 216 56.5
MELO3C008414.2 Cucumis melo HOM05D001605 ORTHO05D003014 7.9e-58 228.0 216 55.1
BcaB01g02866 Brassica carinata HOM05D001605 ORTHO05D003014 1.3e-57 227.3 216 56.0
Eucgr.F02745 Eucalyptus grandis HOM05D001605 ORTHO05D003014 1.8e-57 226.9 219 58.4
Sp6g09600 Schrenkiella parvula HOM05D001605 ORTHO05D003014 3.0e-57 226.1 216 56.0
Manes.02G174700 Manihot esculenta HOM05D001605 ORTHO05D003014 3.9e-57 225.7 220 59.1
Medtr1g023870 Medicago truncatula HOM05D001605 ORTHO05D003014 3.9e-57 225.7 232 54.7
Pp3c16_360 Physcomitrium patens HOM05D001605 ORTHO05D003014 3.9e-57 225.7 231 55.8
Pp3c25_8110 Physcomitrium patens HOM05D001605 ORTHO05D003014 3.9e-57 225.7 231 55.4
Medtr3g089910 Medicago truncatula HOM05D001605 ORTHO05D003014 5.1e-57 225.3 220 59.1
Actinidia16593 Actinidia chinensis HOM05D001605 ORTHO05D003014 1.1e-56 224.2 222 58.1
Cc10_g12970 Coffea canephora HOM05D001605 ORTHO05D003014 1.1e-56 224.2 222 60.4
QL02p025489 Quercus lobata HOM05D001605 ORTHO05D003014 5.7e-56 221.9 220 58.2
Actinidia15162 Actinidia chinensis HOM05D001605 ORTHO05D003014 9.6e-56 221.1 222 55.0
Thhalv10028382m.g Eutrema salsugineum HOM05D001605 ORTHO05D003014 9.6e-56 221.1 216 54.6
VMungo1309G2477 Vigna mungo HOM05D001605 ORTHO05D003014 1.3e-55 220.7 220 59.5
Phvul.009G134600 Phaseolus vulgaris HOM05D001605 ORTHO05D003014 1.6e-55 220.3 220 59.5
Sabra09G0095400 Salix brachista HOM05D001605 ORTHO05D003014 1.6e-55 220.3 243 54.3
Ciclev10000121m.g Citrus clementina HOM05D001605 ORTHO05D003014 2.8e-55 219.5 220 59.5
Nitab4.5_0010232g0010 Nicotiana tabacum HOM05D001605 ORTHO05D003014 6.3e-55 218.4 216 60.2
THA.LOC104806843 Tarenaya hassleriana HOM05D001605 ORTHO05D003014 8.2e-55 218.0 221 53.8
Ca_16648_v3 Cicer arietinum L. HOM05D001605 ORTHO05D003014 1.4e-54 217.2 220 59.5
arahy.Tifrunner.gnm1.ann1.SUKE0C Arachis hypogaea HOM05D001605 ORTHO05D003014 1.8e-54 216.9 221 58.4
arahy.Tifrunner.gnm1.ann1.XKFQ8F Arachis hypogaea HOM05D001605 ORTHO05D003014 1.8e-54 216.9 221 58.4
Rhsim06G0090800 Rhododendron simsii HOM05D001605 ORTHO05D003014 2.4e-54 216.5 220 57.7
Migut.C01045 Erythranthe guttata HOM05D001605 ORTHO05D003014 4.1e-54 215.7 221 57.0
SGA_v2.0_scaffold48G17942 Striga asiatica HOM05D001605 ORTHO05D003014 5.3e-54 215.3 215 57.7
A09p30220 Brassica napus HOM05D001605 ORTHO05D003014 6.9e-54 214.9 216 53.7
PGSC0003DMG402024850 Solanum tuberosum HOM05D001605 ORTHO05D003014 6.9e-54 214.9 216 61.1
Glyma.06G122500 Glycine max HOM05D001605 ORTHO05D003014 2.6e-53 213.0 220 58.2
Oeu001561.1 Olea europaea HOM05D001605 ORTHO05D003014 3.4e-53 212.6 222 55.9
AUR62013483 Chenopodium quinoa HOM05D001605 ORTHO05D003014 7.6e-53 211.5 219 54.8
AUR62026789 Chenopodium quinoa HOM05D001605 ORTHO05D003014 7.6e-53 211.5 219 54.8
vmacro21127 Vaccinium macrocarpon HOM05D001605 ORTHO05D003014 7.6e-53 211.5 220 57.3
Rhsim12G0009500 Rhododendron simsii HOM05D001605 ORTHO05D003014 1.0e-52 211.1 233 55.8
Zm00001eb373500 Zea mays HOM05D001605 ORTHO05D003014 1.3e-52 210.7 222 55.4
Sed0025518 Sechium edule HOM05D001605 ORTHO05D003014 2.2e-52 209.9 200 61.5
SalBow7G2351 Salvia bowleyana HOM05D001605 ORTHO05D003014 2.9e-52 209.5 221 56.1
Dinv41129 Davidia involucrata HOM05D001605 ORTHO05D003014 1.1e-51 207.6 220 54.1
BcaC04g20905 Brassica carinata HOM05D001605 ORTHO05D003014 2.5e-51 206.5 216 52.8
C09p38130 Brassica napus HOM05D001605 ORTHO05D003014 2.5e-51 206.5 216 52.8
BolC9t56650H Brassica oleracea HOM05D001605 ORTHO05D003014 2.5e-51 206.5 216 52.8
COL.COLO4_08860 Corchorus olitorius HOM05D001605 ORTHO05D003014 2.5e-51 206.5 219 57.5
A03p19040 Brassica napus HOM05D001605 ORTHO05D003014 2.1e-50 203.4 216 50.0
EL10Ac1g01470 Beta vulgaris HOM05D001605 ORTHO05D003014 2.7e-50 203.0 240 52.1
Lsat_1_v5_gn_7_47540 Lactuca sativa HOM05D001605 ORTHO05D003014 1.3e-49 200.7 224 53.6
CDE06G0467 Ceratophyllum demersum HOM05D001605 ORTHO05D003014 1.8e-49 200.3 176 58.0
Lsat_1_v5_gn_2_107160 Lactuca sativa HOM05D001605 ORTHO05D003014 3.9e-49 199.1 220 55.0
AagrBONN_evm.TU.Sc2ySwM_369.275 Anthoceros agrestis HOM05D001605 ORTHO05D003014 1.1e-48 197.6 224 53.1
Mapoly0027s0102 Marchantia polymorpha HOM05D001605 ORTHO05D003014 4.3e-48 195.7 228 57.0
CSS0028371 Camellia sinensis var. sinensis HOM05D001605 ORTHO05D003014 2.2e-47 193.4 220 55.9
BcaB01g03900 Brassica carinata HOM05D001605 ORTHO05D003014 2.8e-47 193.0 215 49.3
CAN.G1045.24 Capsicum annuum HOM05D001605 ORTHO05D003014 5.3e-46 188.7 235 49.4
ECA240G4004 Erigeron canadensis HOM05D001605 ORTHO05D003014 1.7e-44 183.7 221 48.0
vmacro01512 Vaccinium macrocarpon HOM05D001605 ORTHO05D003014 7.2e-43 178.3 195 53.8
Gohir.A05G241600 Gossypium hirsutum HOM05D001605 ORTHO05D003014 1.6e-42 177.2 185 58.4
AL4G30140 Arabidopsis lyrata HOM05D001605 ORTHO05D003014 4.6e-42 175.6 216 45.8
Carub.0004s1584 Capsella rubella HOM05D001605 ORTHO05D003014 6.1e-42 175.3 216 44.9
AT2G34210 Arabidopsis thaliana HOM05D001605 ORTHO05D003014 9.7e-40 167.9 216 45.8
BraA03t11162Z Brassica rapa HOM05D001605 ORTHO05D003014 1.0e-36 157.9 221 41.2
BcaC01g05804 Brassica carinata HOM05D001605 ORTHO05D003014 2.9e-36 156.4 223 41.7
C03p22230 Brassica napus HOM05D001605 ORTHO05D003014 2.9e-36 156.4 223 41.7
BolC3t14607H Brassica oleracea HOM05D001605 ORTHO05D003014 2.9e-36 156.4 223 41.7
SMO137G0201 Selaginella moellendorffii HOM05D001605 ORTHO05D003014 3.2e-35 152.9 211 50.2
SMO162G0003 Selaginella moellendorffii HOM05D001605 ORTHO05D003014 4.7e-34 149.1 216 50.0
CBR_g27949 Chara braunii HOM05D001605 ORTHO05D003014 1.4e-33 147.5 214 44.4
TPR.G819 Trifolium pratense HOM05D001605 ORTHO05D003014 1.4e-33 147.5 122 61.5
arahy.Tifrunner.gnm1.ann1.E7CKP3 Arachis hypogaea HOM05D001605 ORTHO05D003014 1.8e-30 137.1 117 59.0
QL07p038796 Quercus lobata HOM05D001605 ORTHO05D003014 7.7e-29 131.7 122 53.3
QL07p039046 Quercus lobata HOM05D001605 ORTHO05D003014 7.7e-29 131.7 122 53.3
Sp4g16520 Schrenkiella parvula HOM05D001605 ORTHO05D003014 1.0e-28 131.3 111 54.1
BraA09t38589Z Brassica rapa HOM05D001605 ORTHO05D003014 1.7e-28 130.6 110 56.4
Sc23g0005020 Simmondsia chinensis HOM05D001605 ORTHO05D003014 1.6e-26 124.0 160 46.2
Sc26g0002740 Simmondsia chinensis HOM05D001605 ORTHO05D003014 1.7e-23 114.0 111 63.1
TPR.G18764 Trifolium pratense HOM05D001605 ORTHO05D003014 4.8e-23 112.5 129 55.8
AT4G08360 Arabidopsis thaliana HOM05D001605 ORTHO05D003014 2.0e-21 107.1 102 54.9
QL12p037358 Quercus lobata HOM05D001605 ORTHO05D003014 2.5e-19 100.1 95 50.5
arahy.Tifrunner.gnm1.ann1.0IUR8P Arachis hypogaea HOM05D001605 ORTHO05D003014 2.0e-16 90.5 105 49.5
arahy.Tifrunner.gnm1.ann1.XYB1GT Arachis hypogaea HOM05D001605 ORTHO05D003014 2.0e-16 90.5 105 49.5
Hma1.2p1_1530F.1_g289170 Hydrangea macrophylla HOM05D001605 ORTHO05D003014 3.7e-15 86.3 113 44.2
Mapoly0084s0047 Marchantia polymorpha HOM05D001605 ORTHO05D003014 9.1e-14 81.6 115 34.8
Cre01.g031050 Chlamydomonas reinhardtii HOM05D001605 ORTHO05D003014 4.2e-11 72.8 218 40.4
CSS0008222 Camellia sinensis var. sinensis HOM05D001605 ORTHO05D003014 4.7e-10 69.3 55 63.6
Actinidia14023 Actinidia chinensis HOM05D001605 ORTHO05D003014 1.0e-09 68.2 63 55.6


User provided reference genes

Program Settings