Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL12p037358 Quercus lobata HOM05D001605 ORTHO05D003014 4.6e-52 207.6 104 100.0
QL07p038796 Quercus lobata HOM05D001605 ORTHO05D003014 2.0e-39 165.6 93 88.2
QL07p039046 Quercus lobata HOM05D001605 ORTHO05D003014 2.0e-39 165.6 93 88.2
QL02p025489 Quercus lobata HOM05D001605 ORTHO05D003014 2.9e-30 135.2 95 74.7
CiPaw.16G018200 Carya illinoinensis HOM05D001605 ORTHO05D003014 1.4e-29 132.9 95 73.7
Haze_17697 Corylus avellana HOM05D001605 ORTHO05D003014 1.4e-29 132.9 95 71.6
Cfa018371 Carpinus fangiana HOM05D001605 ORTHO05D003014 2.5e-29 132.1 95 70.5
CSS0028371 Camellia sinensis var. sinensis HOM05D001605 ORTHO05D003014 1.8e-27 125.9 95 67.4
FvH4_2g14770 Fragaria vesca HOM05D001605 ORTHO05D003014 3.0e-27 125.2 95 68.4
FAN15G1258 Fragaria x ananassa HOM05D001605 ORTHO05D003014 3.0e-27 125.2 95 68.4
FAN24G3135 Fragaria x ananassa HOM05D001605 ORTHO05D003014 3.0e-27 125.2 95 68.4
Prupe.8G018000 Prunus persica HOM05D001605 ORTHO05D003014 3.0e-27 125.2 95 67.4
RcHm_v2.0_Chr6g0277331 Rosa chinensis HOM05D001605 ORTHO05D003014 3.0e-27 125.2 95 67.4
Dinv41129 Davidia involucrata HOM05D001605 ORTHO05D003014 3.9e-27 124.8 95 66.3
Manes.02G174700 Manihot esculenta HOM05D001605 ORTHO05D003014 3.9e-27 124.8 95 65.3
FAN20G0370 Fragaria x ananassa HOM05D001605 ORTHO05D003014 6.7e-27 124.0 95 67.4
Manes.18G086700 Manihot esculenta HOM05D001605 ORTHO05D003014 1.5e-26 122.9 95 63.2
Aqoxy3G04296 Aquilegia oxysepala HOM05D001605 ORTHO05D003014 1.9e-26 122.5 93 62.4
arahy.Tifrunner.gnm1.ann1.E7CKP3 Arachis hypogaea HOM05D001605 ORTHO05D003014 3.3e-26 121.7 95 63.2
arahy.Tifrunner.gnm1.ann1.SUKE0C Arachis hypogaea HOM05D001605 ORTHO05D003014 7.4e-26 120.6 95 63.2
arahy.Tifrunner.gnm1.ann1.XKFQ8F Arachis hypogaea HOM05D001605 ORTHO05D003014 7.4e-26 120.6 95 63.2
Hma1.2p1_0107F.1_g051400 Hydrangea macrophylla HOM05D001605 ORTHO05D003014 7.4e-26 120.6 94 63.8
MBI04_g13672_MAGBIO Magnolia biondii HOM05D001605 ORTHO05D003014 7.4e-26 120.6 95 63.2
TWI60G0151 Tripterygium wilfordii HOM05D001605 ORTHO05D003014 7.4e-26 120.6 95 62.1
Dinv25801 Davidia involucrata HOM05D001605 ORTHO05D003014 9.6e-26 120.2 95 64.2
PSO063G1730 Papaver somniferum HOM05D001605 ORTHO05D003014 1.3e-25 119.8 95 61.1
PSO782G0565 Papaver somniferum HOM05D001605 ORTHO05D003014 1.3e-25 119.8 95 61.1
Oeu001561.1 Olea europaea HOM05D001605 ORTHO05D003014 1.6e-25 119.4 95 61.1
Lsat_1_v5_gn_3_132801 Lactuca sativa HOM05D001605 ORTHO05D003014 2.1e-25 119.0 93 62.4
AUR62026789 Chenopodium quinoa HOM05D001605 ORTHO05D003014 2.8e-25 118.6 99 60.6
Nn5g28614 Nelumbo nucifera HOM05D001605 ORTHO05D003014 2.8e-25 118.6 95 62.1
Actinidia16593 Actinidia chinensis HOM05D001605 ORTHO05D003014 3.7e-25 118.2 95 62.1
AUR62013483 Chenopodium quinoa HOM05D001605 ORTHO05D003014 4.8e-25 117.9 99 60.6
Lj1g0017948 Lotus japonicus HOM05D001605 ORTHO05D003014 4.8e-25 117.9 95 61.1
Lalb_Chr11g0066411 Lupinus albus HOM05D001605 ORTHO05D003014 4.8e-25 117.9 95 63.2
Lalb_Chr23g0271331 Lupinus albus HOM05D001605 ORTHO05D003014 4.8e-25 117.9 95 62.1
Lj4C691T3 Lonicera japonica HOM05D001605 ORTHO05D003014 6.2e-25 117.5 95 58.9
MD05G1013100 Malus domestica HOM05D001605 ORTHO05D003014 6.2e-25 117.5 95 62.1
Phvul.009G134600 Phaseolus vulgaris HOM05D001605 ORTHO05D003014 8.2e-25 117.1 95 62.1
Sabra09G0095400 Salix brachista HOM05D001605 ORTHO05D003014 8.2e-25 117.1 95 61.1
Thecc.08G143700 Theobroma cacao HOM05D001605 ORTHO05D003014 8.2e-25 117.1 95 60.0
HanXRQChr04g0125191 Helianthus annuus HOM05D001605 ORTHO05D003014 1.1e-24 116.7 95 62.1
Glyma.04G240900 Glycine max HOM05D001605 ORTHO05D003014 1.8e-24 115.9 95 62.1
Gohir.A02G067000 Gossypium hirsutum HOM05D001605 ORTHO05D003014 1.8e-24 115.9 95 57.9
Lalb_Chr08g0240791 Lupinus albus HOM05D001605 ORTHO05D003014 1.8e-24 115.9 95 60.0
SalBow7G2351 Salvia bowleyana HOM05D001605 ORTHO05D003014 1.8e-24 115.9 95 62.1
Ah.05g167510 Amaranthus hybridus HOM05D001605 ORTHO05D003014 2.4e-24 115.5 99 56.6
Duzib116G0915 Durio zibethinus HOM05D001605 ORTHO05D003014 2.4e-24 115.5 95 58.9
Gohir.D02G073200 Gossypium hirsutum HOM05D001605 ORTHO05D003014 2.4e-24 115.5 95 58.9
VMungo1309G2477 Vigna mungo HOM05D001605 ORTHO05D003014 2.4e-24 115.5 95 61.1
ATR0665G314 Amborella trichopoda HOM05D001605 ORTHO05D003014 3.1e-24 115.2 95 60.0
CDE07G1070 Ceratophyllum demersum HOM05D001605 ORTHO05D003014 3.1e-24 115.2 95 57.9
Glyma.06G122500 Glycine max HOM05D001605 ORTHO05D003014 3.1e-24 115.2 95 62.1
Psat5g080840 Pisum sativum HOM05D001605 ORTHO05D003014 3.1e-24 115.2 95 61.1
TWI34G1926 Tripterygium wilfordii HOM05D001605 ORTHO05D003014 3.1e-24 115.2 95 58.9
EL10Ac1g01470 Beta vulgaris HOM05D001605 ORTHO05D003014 4.1e-24 114.8 99 57.6
Ciclev10000121m.g Citrus clementina HOM05D001605 ORTHO05D003014 4.1e-24 114.8 95 64.2
Potri.004G162500 Populus trichocarpa HOM05D001605 ORTHO05D003014 4.1e-24 114.8 95 60.0
vmacro21127 Vaccinium macrocarpon HOM05D001605 ORTHO05D003014 4.1e-24 114.8 95 63.2
CANSAT25G3051 Cannabis sativa HOM05D001605 ORTHO05D003014 5.3e-24 114.4 95 60.0
Gorai.005G082600 Gossypium raimondii HOM05D001605 ORTHO05D003014 5.3e-24 114.4 95 57.9
ClCG08G006430 Citrullus lanatus HOM05D001605 ORTHO05D003014 6.9e-24 114.0 95 61.1
MELO3C008414.2 Cucumis melo HOM05D001605 ORTHO05D003014 6.9e-24 114.0 95 61.1
CsaV3_6G031000 Cucumis sativus L. HOM05D001605 ORTHO05D003014 6.9e-24 114.0 95 61.1
Rhsim06G0090800 Rhododendron simsii HOM05D001605 ORTHO05D003014 6.9e-24 114.0 95 62.1
TPR.G819 Trifolium pratense HOM05D001605 ORTHO05D003014 6.9e-24 114.0 95 61.1
Migut.C01045 Erythranthe guttata HOM05D001605 ORTHO05D003014 9.0e-24 113.6 95 60.0
Potri.009G124200 Populus trichocarpa HOM05D001605 ORTHO05D003014 9.0e-24 113.6 95 58.9
Sed0025518 Sechium edule HOM05D001605 ORTHO05D003014 9.0e-24 113.6 95 58.9
Cpa.g.sc188.8 Carica papaya HOM05D001605 ORTHO05D003014 1.2e-23 113.2 95 56.8
SGA_v2.0_scaffold48G17942 Striga asiatica HOM05D001605 ORTHO05D003014 1.2e-23 113.2 95 57.9
Hund26733 Selenicereus undatus HOM05D001605 ORTHO05D003014 1.5e-23 112.8 99 54.5
Cc10_g12970 Coffea canephora HOM05D001605 ORTHO05D003014 2.0e-23 112.5 95 60.0
DCAR_001109 Daucus carota HOM05D001605 ORTHO05D003014 2.0e-23 112.5 95 56.8
MSTRG.1376 Avicennia marina HOM05D001605 ORTHO05D003014 2.6e-23 112.1 95 57.9
COL.COLO4_08860 Corchorus olitorius HOM05D001605 ORTHO05D003014 2.6e-23 112.1 95 57.9
ECA247G0063 Erigeron canadensis HOM05D001605 ORTHO05D003014 2.6e-23 112.1 95 56.8
TAR381G0699 Trochodendron aralioides HOM05D001605 ORTHO05D003014 2.6e-23 112.1 95 60.0
Gohir.D05G242900 Gossypium hirsutum HOM05D001605 ORTHO05D003014 4.5e-23 111.3 95 56.8
THA.LOC104806843 Tarenaya hassleriana HOM05D001605 ORTHO05D003014 4.5e-23 111.3 95 56.8
MD10G1013600 Malus domestica HOM05D001605 ORTHO05D003014 5.8e-23 110.9 95 60.0
Ca_16648_v3 Cicer arietinum L. HOM05D001605 ORTHO05D003014 7.6e-23 110.5 95 58.9
DCAR_010233 Daucus carota HOM05D001605 ORTHO05D003014 7.6e-23 110.5 95 55.8
Duzib041G0436 Durio zibethinus HOM05D001605 ORTHO05D003014 1.0e-22 110.2 95 56.8
Lsat_1_v5_gn_2_107160 Lactuca sativa HOM05D001605 ORTHO05D003014 1.0e-22 110.2 90 58.9
Solyc04g064700.4 Solanum lycopersicum HOM05D001605 ORTHO05D003014 1.3e-22 109.8 95 56.8
Sopen04g026660 Solanum pennellii HOM05D001605 ORTHO05D003014 1.3e-22 109.8 95 56.8
PGSC0003DMG402024850 Solanum tuberosum HOM05D001605 ORTHO05D003014 1.3e-22 109.8 95 56.8
Gorai.009G252200 Gossypium raimondii HOM05D001605 ORTHO05D003014 1.7e-22 109.4 95 56.8
TAR625G1035 Trochodendron aralioides HOM05D001605 ORTHO05D003014 1.7e-22 109.4 95 57.9
THA.LOC104798874 Tarenaya hassleriana HOM05D001605 ORTHO05D003014 2.2e-22 109.0 95 55.8
unitig_748.g7696 Utricularia gibba HOM05D001605 ORTHO05D003014 2.9e-22 108.6 95 53.7
Sed0025239 Sechium edule HOM05D001605 ORTHO05D003014 3.8e-22 108.2 95 55.8
Actinidia15162 Actinidia chinensis HOM05D001605 ORTHO05D003014 5.0e-22 107.8 95 60.0
Medtr3g089910 Medicago truncatula HOM05D001605 ORTHO05D003014 5.0e-22 107.8 96 59.4
GSVIVG01010022001 Vitis vinifera HOM05D001605 ORTHO05D003014 6.5e-22 107.5 95 58.9
Gohir.A05G269500 Gossypium hirsutum HOM05D001605 ORTHO05D003014 8.4e-22 107.1 95 52.6
Gohir.D05G271600 Gossypium hirsutum HOM05D001605 ORTHO05D003014 8.4e-22 107.1 95 52.6
Gorai.009G284500 Gossypium raimondii HOM05D001605 ORTHO05D003014 8.4e-22 107.1 95 52.6
vmacro01512 Vaccinium macrocarpon HOM05D001605 ORTHO05D003014 1.1e-21 106.7 95 60.0
Eucgr.F02745 Eucalyptus grandis HOM05D001605 ORTHO05D003014 1.4e-21 106.3 89 59.6
Nitab4.5_0000445g0150 Nicotiana tabacum HOM05D001605 ORTHO05D003014 1.4e-21 106.3 95 54.7
Nitab4.5_0009413g0010 Nicotiana tabacum HOM05D001605 ORTHO05D003014 1.4e-21 106.3 95 54.7
Peaxi162Scf00263g00122 Petunia axillaris HOM05D001605 ORTHO05D003014 1.4e-21 106.3 95 53.7
Atru.chr13.1705 Acer truncatum HOM05D001605 ORTHO05D003014 3.2e-21 105.1 98 56.1
CAN.G1045.24 Capsicum annuum HOM05D001605 ORTHO05D003014 3.2e-21 105.1 107 49.5
Os06g0208300 Oryza sativa ssp. japonica HOM05D001605 ORTHO05D003014 3.2e-21 105.1 95 53.7
Medtr1g023870 Medicago truncatula HOM05D001605 ORTHO05D003014 4.2e-21 104.8 95 56.8
ECA240G4004 Erigeron canadensis HOM05D001605 ORTHO05D003014 1.2e-20 103.2 92 54.3
Nitab4.5_0010232g0010 Nicotiana tabacum HOM05D001605 ORTHO05D003014 1.2e-20 103.2 95 53.7
Carub.0006s2691 Capsella rubella HOM05D001605 ORTHO05D003014 1.6e-20 102.8 95 52.6
Rhsim12G0009500 Rhododendron simsii HOM05D001605 ORTHO05D003014 1.6e-20 102.8 88 61.4
AL6G42110 Arabidopsis lyrata HOM05D001605 ORTHO05D003014 3.5e-20 101.7 95 51.6
Pp3c16_360 Physcomitrium patens HOM05D001605 ORTHO05D003014 4.6e-20 101.3 95 52.6
AT4G08350 Arabidopsis thaliana HOM05D001605 ORTHO05D003014 6.1e-20 100.9 95 50.5
A03p27980 Brassica napus HOM05D001605 ORTHO05D003014 6.1e-20 100.9 95 51.6
BraA03t12015Z Brassica rapa HOM05D001605 ORTHO05D003014 6.1e-20 100.9 95 51.6
CARHR259450 Cardamine hirsuta HOM05D001605 ORTHO05D003014 6.1e-20 100.9 95 52.6
Sp4g16520 Schrenkiella parvula HOM05D001605 ORTHO05D003014 7.9e-20 100.5 95 52.6
SEGI_21526 Sequoiadendron giganteum HOM05D001605 ORTHO05D003014 7.9e-20 100.5 95 50.5
BcaB01g02866 Brassica carinata HOM05D001605 ORTHO05D003014 1.3e-19 99.8 95 50.5
Pp3c25_8110 Physcomitrium patens HOM05D001605 ORTHO05D003014 1.3e-19 99.8 95 51.6
BcaC01g04775 Brassica carinata HOM05D001605 ORTHO05D003014 2.3e-19 99.0 95 50.5
C03p33860 Brassica napus HOM05D001605 ORTHO05D003014 2.3e-19 99.0 95 50.5
BolC3t15701H Brassica oleracea HOM05D001605 ORTHO05D003014 2.3e-19 99.0 95 50.5
Sp6g09600 Schrenkiella parvula HOM05D001605 ORTHO05D003014 2.3e-19 99.0 95 50.5
Thhalv10028382m.g Eutrema salsugineum HOM05D001605 ORTHO05D003014 3.0e-19 98.6 95 49.5
BcaB01g01341 Brassica carinata HOM05D001605 ORTHO05D003014 5.1e-19 97.8 95 49.5
A09p30220 Brassica napus HOM05D001605 ORTHO05D003014 6.7e-19 97.4 95 48.4
BraA09t38589Z Brassica rapa HOM05D001605 ORTHO05D003014 6.7e-19 97.4 95 48.4
Lsat_1_v5_gn_7_47540 Lactuca sativa HOM05D001605 ORTHO05D003014 8.7e-19 97.1 98 51.0
BcaB01g03900 Brassica carinata HOM05D001605 ORTHO05D003014 1.1e-18 96.7 95 50.5
BraA03t11162Z Brassica rapa HOM05D001605 ORTHO05D003014 1.1e-18 96.7 99 49.5
PGR042G1363 Punica granatum HOM05D001605 ORTHO05D003014 1.1e-18 96.7 99 49.5
HPP92_021877 Vanilla planifolia HOM05D001605 ORTHO05D003014 1.1e-18 96.7 95 50.5
Zm00001eb373500 Zea mays HOM05D001605 ORTHO05D003014 1.5e-18 96.3 95 48.4
A03p19040 Brassica napus HOM05D001605 ORTHO05D003014 2.5e-18 95.5 99 48.5
BcaC04g20905 Brassica carinata HOM05D001605 ORTHO05D003014 4.3e-18 94.7 95 47.4
C09p38130 Brassica napus HOM05D001605 ORTHO05D003014 4.3e-18 94.7 95 47.4
BolC9t56650H Brassica oleracea HOM05D001605 ORTHO05D003014 4.3e-18 94.7 95 47.4
Aa31LG9G14140 Aethionema arabicum HOM05D001605 ORTHO05D003014 7.4e-18 94.0 95 48.4
BcaC01g05804 Brassica carinata HOM05D001605 ORTHO05D003014 7.4e-18 94.0 100 48.0
C03p22230 Brassica napus HOM05D001605 ORTHO05D003014 7.4e-18 94.0 100 48.0
BolC3t14607H Brassica oleracea HOM05D001605 ORTHO05D003014 7.4e-18 94.0 100 48.0
Mapoly0027s0102 Marchantia polymorpha HOM05D001605 ORTHO05D003014 2.8e-17 92.0 103 44.7
AagrBONN_evm.TU.Sc2ySwM_369.275 Anthoceros agrestis HOM05D001605 ORTHO05D003014 3.7e-17 91.7 103 47.6
AL4G30140 Arabidopsis lyrata HOM05D001605 ORTHO05D003014 6.9e-16 87.4 95 46.3
AT2G34210 Arabidopsis thaliana HOM05D001605 ORTHO05D003014 6.9e-16 87.4 95 46.3
CBR_g27949 Chara braunii HOM05D001605 ORTHO05D003014 6.9e-16 87.4 95 46.3
Hma1.2p1_1530F.1_g289170 Hydrangea macrophylla HOM05D001605 ORTHO05D003014 9.0e-16 87.0 91 49.5
Carub.0004s1584 Capsella rubella HOM05D001605 ORTHO05D003014 2.0e-15 85.9 95 46.3
SMO162G0003 Selaginella moellendorffii HOM05D001605 ORTHO05D003014 2.1e-12 75.9 84 41.7
SMO137G0201 Selaginella moellendorffii HOM05D001605 ORTHO05D003014 2.7e-12 75.5 84 41.7
AT4G08360 Arabidopsis thaliana HOM05D001605 ORTHO05D003014 1.4e-11 73.2 95 43.2
arahy.Tifrunner.gnm1.ann1.0IUR8P Arachis hypogaea HOM05D001605 ORTHO05D003014 1.8e-11 72.8 59 61.0
arahy.Tifrunner.gnm1.ann1.XYB1GT Arachis hypogaea HOM05D001605 ORTHO05D003014 1.8e-11 72.8 59 61.0
Gohir.A05G241600 Gossypium hirsutum HOM05D001605 ORTHO05D003014 3.0e-11 72.0 70 51.4
Sc23g0005020 Simmondsia chinensis HOM05D001605 ORTHO05D003014 9.7e-10 67.0 66 47.0
CDE06G0467 Ceratophyllum demersum HOM05D001605 ORTHO05D003014 2.6e-07 58.9 56 55.4
Mapoly0084s0047 Marchantia polymorpha HOM05D001605 ORTHO05D003014 7.7e-07 57.4 89 36.0


User provided reference genes

Program Settings