Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G5008 Papaver somniferum HOM05D004484 ORTHO05D005370 0.0e+00 1361.7 692 100.0
Dinv32377 Davidia involucrata HOM05D004484 ORTHO05D005370 1.0e-301 1039.6 688 75.4
Aqoxy5G00403 Aquilegia oxysepala HOM05D004484 ORTHO05D005370 1.3e-299 1032.7 692 75.9
Nn1g01233 Nelumbo nucifera HOM05D004484 ORTHO05D005370 3.1e-298 1028.1 688 74.4
Prupe.2G145600 Prunus persica HOM05D004484 ORTHO05D005370 9.8e-292 1006.5 689 72.4
TAR629G2468 Trochodendron aralioides HOM05D004484 ORTHO05D005370 9.8e-292 1006.5 671 74.8
QL08p052472 Quercus lobata HOM05D004484 ORTHO05D005370 3.7e-291 1004.6 689 72.4
MD07G1121000 Malus domestica HOM05D004484 ORTHO05D005370 1.1e-290 1003.0 689 71.8
CiPaw.01G262000 Carya illinoinensis HOM05D004484 ORTHO05D005370 4.6e-289 997.7 691 70.8
Nitab4.5_0000457g0330 Nicotiana tabacum HOM05D004484 ORTHO05D005370 8.6e-288 993.4 691 71.1
Oeu055487.1 Olea europaea HOM05D004484 ORTHO05D005370 3.3e-287 991.5 689 71.4
TWI23G0227 Tripterygium wilfordii HOM05D004484 ORTHO05D005370 2.1e-286 988.8 689 71.7
Atru.chr5.309 Acer truncatum HOM05D004484 ORTHO05D005370 1.0e-285 986.5 685 72.0
Hma1.2p1_0086F.1_g044870 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 1.4e-285 986.1 686 72.6
Cc02_g36700 Coffea canephora HOM05D004484 ORTHO05D005370 5.8e-284 980.7 690 70.9
GSVIVG01027610001 Vitis vinifera HOM05D004484 ORTHO05D005370 1.7e-283 979.2 672 72.2
Eucgr.E01418 Eucalyptus grandis HOM05D004484 ORTHO05D005370 4.9e-283 977.6 689 70.7
Potri.014G069700 Populus trichocarpa HOM05D004484 ORTHO05D005370 1.4e-282 976.1 688 71.2
Manes.01G265900 Manihot esculenta HOM05D004484 ORTHO05D005370 1.9e-282 975.7 688 70.6
Peaxi162Scf00021g01723 Petunia axillaris HOM05D004484 ORTHO05D005370 2.4e-282 975.3 688 69.9
Lj7A528T57 Lonicera japonica HOM05D004484 ORTHO05D005370 9.2e-282 973.4 696 71.3
Ca_19886_v3 Cicer arietinum L. HOM05D004484 ORTHO05D005370 1.2e-281 973.0 688 70.3
DCAR_015907 Daucus carota HOM05D004484 ORTHO05D005370 1.2e-281 973.0 690 70.6
CSS0036976 Camellia sinensis var. sinensis HOM05D004484 ORTHO05D005370 7.8e-281 970.3 695 71.4
ECA234G1700 Erigeron canadensis HOM05D004484 ORTHO05D005370 3.0e-280 968.4 689 69.5
Haze_16815 Corylus avellana HOM05D004484 ORTHO05D005370 1.9e-279 965.7 746 66.2
CAN.G388.13 Capsicum annuum HOM05D004484 ORTHO05D005370 3.3e-279 964.9 686 69.7
Sed0020955 Sechium edule HOM05D004484 ORTHO05D005370 4.3e-279 964.5 689 69.2
PGSC0003DMG400012761 Solanum tuberosum HOM05D004484 ORTHO05D005370 9.5e-279 963.4 690 69.1
ClCG05G002220 Citrullus lanatus HOM05D004484 ORTHO05D005370 2.8e-278 961.8 689 70.4
MSTRG.20748 Avicennia marina HOM05D004484 ORTHO05D005370 4.7e-278 961.1 692 69.8
Lj3g0013484 Lotus japonicus HOM05D004484 ORTHO05D005370 1.1e-277 959.9 688 69.5
Medtr4g023560 Medicago truncatula HOM05D004484 ORTHO05D005370 3.1e-277 958.4 688 69.8
CANSAT56G4533 Cannabis sativa HOM05D004484 ORTHO05D005370 1.5e-276 956.1 689 70.0
Ciclev10019016m.g Citrus clementina HOM05D004484 ORTHO05D005370 1.5e-276 956.1 689 70.0
MBI12_g10758_MAGBIO Magnolia biondii HOM05D004484 ORTHO05D005370 2.0e-276 955.7 718 67.8
CsaV3_3G009680 Cucumis sativus L. HOM05D004484 ORTHO05D005370 3.4e-276 954.9 689 68.8
Lalb_Chr13g0291731 Lupinus albus HOM05D004484 ORTHO05D005370 3.4e-276 954.9 691 68.9
FvH4_7g11900 Fragaria vesca HOM05D004484 ORTHO05D005370 1.7e-275 952.6 689 67.6
Sc02g0002590 Simmondsia chinensis HOM05D004484 ORTHO05D005370 2.2e-275 952.2 672 69.6
CANSAT56G1200 Cannabis sativa HOM05D004484 ORTHO05D005370 4.9e-275 951.0 689 69.8
Ca_27059_v3 Cicer arietinum L. HOM05D004484 ORTHO05D005370 4.9e-275 951.0 688 69.0
Aqoxy3G02138 Aquilegia oxysepala HOM05D004484 ORTHO05D005370 1.1e-274 949.9 691 69.5
Psat7g233440 Pisum sativum HOM05D004484 ORTHO05D005370 1.9e-274 949.1 689 68.4
SGA_v2.0_scaffold153G37012 Striga asiatica HOM05D004484 ORTHO05D005370 1.2e-273 946.4 691 68.7
FAN01G0628 Fragaria x ananassa HOM05D004484 ORTHO05D005370 2.1e-273 945.7 689 66.9
Thecc.01G376200 Theobroma cacao HOM05D004484 ORTHO05D005370 2.1e-273 945.7 689 67.9
FAN10G1483 Fragaria x ananassa HOM05D004484 ORTHO05D005370 6.0e-273 944.1 689 67.3
FAN06G1787 Fragaria x ananassa HOM05D004484 ORTHO05D005370 7.8e-273 943.7 689 67.3
Solyc01g091350.4 Solanum lycopersicum HOM05D004484 ORTHO05D005370 7.8e-273 943.7 688 67.7
Nitab4.5_0005372g0070 Nicotiana tabacum HOM05D004484 ORTHO05D005370 3.9e-272 941.4 701 67.9
FAN10G2369 Fragaria x ananassa HOM05D004484 ORTHO05D005370 6.6e-272 940.6 689 67.2
HanXRQChr16g0520161 Helianthus annuus HOM05D004484 ORTHO05D005370 6.6e-272 940.6 690 67.5
FAN06G3319 Fragaria x ananassa HOM05D004484 ORTHO05D005370 8.6e-272 940.3 689 66.9
Sopen01g037090 Solanum pennellii HOM05D004484 ORTHO05D005370 2.5e-271 938.7 688 67.6
Cpa.g.sc18.115 Carica papaya HOM05D004484 ORTHO05D005370 5.6e-271 937.6 688 68.3
vmacro13399 Vaccinium macrocarpon HOM05D004484 ORTHO05D005370 2.8e-270 935.3 689 68.9
arahy.Tifrunner.gnm1.ann1.V1M046 Arachis hypogaea HOM05D004484 ORTHO05D005370 1.4e-269 932.9 692 68.1
Migut.B01635 Erythranthe guttata HOM05D004484 ORTHO05D005370 1.8e-269 932.6 689 68.5
arahy.Tifrunner.gnm1.ann1.6K85L9 Arachis hypogaea HOM05D004484 ORTHO05D005370 3.1e-269 931.8 692 68.1
arahy.Tifrunner.gnm1.ann1.HW1IVJ Arachis hypogaea HOM05D004484 ORTHO05D005370 3.1e-269 931.8 692 68.1
Lsat_1_v5_gn_4_43240 Lactuca sativa HOM05D004484 ORTHO05D005370 6.8e-269 930.6 688 67.7
arahy.Tifrunner.gnm1.ann1.Q9SWB6 Arachis hypogaea HOM05D004484 ORTHO05D005370 1.2e-268 929.9 692 67.8
PGR042G0667 Punica granatum HOM05D004484 ORTHO05D005370 2.0e-268 929.1 691 66.7
Glyma.05G125700 Glycine max HOM05D004484 ORTHO05D005370 2.6e-268 928.7 692 67.2
Phvul.002G205800 Phaseolus vulgaris HOM05D004484 ORTHO05D005370 2.6e-268 928.7 686 67.9
EL10Ac1g00900 Beta vulgaris HOM05D004484 ORTHO05D005370 3.2e-266 921.8 710 64.6
Sabra14G0049400 Salix brachista HOM05D004484 ORTHO05D005370 1.1e-263 913.3 702 67.1
MELO3C006188.2 Cucumis melo HOM05D004484 ORTHO05D005370 5.6e-263 911.0 654 69.3
VMungo0251G1206 Vigna mungo HOM05D004484 ORTHO05D005370 2.1e-262 909.1 687 65.8
AUR62004221 Chenopodium quinoa HOM05D004484 ORTHO05D005370 4.7e-262 907.9 720 63.8
Lalb_Chr12g0208261 Lupinus albus HOM05D004484 ORTHO05D005370 1.5e-260 902.9 691 65.8
Gorai.007G091100 Gossypium raimondii HOM05D004484 ORTHO05D005370 4.2e-258 894.8 690 65.1
Gohir.D11G085300 Gossypium hirsutum HOM05D004484 ORTHO05D005370 2.7e-257 892.1 690 65.1
Gohir.A11G080700 Gossypium hirsutum HOM05D004484 ORTHO05D005370 3.5e-257 891.7 690 64.5
FAN03G1897 Fragaria x ananassa HOM05D004484 ORTHO05D005370 2.7e-249 865.5 694 62.5
TPR.G9845 Trifolium pratense HOM05D004484 ORTHO05D005370 1.9e-247 859.4 723 61.4
Ah.13g073490 Amaranthus hybridus HOM05D004484 ORTHO05D005370 2.5e-247 859.0 712 62.1
THA.LOC104817247 Tarenaya hassleriana HOM05D004484 ORTHO05D005370 9.3e-242 840.5 689 61.0
GSVIVG01027609001 Vitis vinifera HOM05D004484 ORTHO05D005370 1.0e-240 837.0 659 65.4
Cfa001721 Carpinus fangiana HOM05D004484 ORTHO05D005370 2.5e-239 832.4 584 71.4
BcaB04g17469 Brassica carinata HOM05D004484 ORTHO05D005370 1.6e-238 829.7 690 58.8
AT1G48050 Arabidopsis thaliana HOM05D004484 ORTHO05D005370 2.1e-238 829.3 688 59.2
Carub.0001s3716 Capsella rubella HOM05D004484 ORTHO05D005370 2.4e-237 825.9 689 59.1
BraSC267t45947Z Brassica rapa HOM05D004484 ORTHO05D005370 4.5e-236 821.6 685 58.4
Sp1g35020 Schrenkiella parvula HOM05D004484 ORTHO05D005370 1.0e-235 820.5 681 58.6
C08p05620 Brassica napus HOM05D004484 ORTHO05D005370 1.7e-235 819.7 685 58.5
BcaC07g37180 Brassica carinata HOM05D004484 ORTHO05D005370 2.2e-235 819.3 691 58.6
BolC8t47375H Brassica oleracea HOM05D004484 ORTHO05D005370 1.9e-234 816.2 685 58.4
AUR62013627 Chenopodium quinoa HOM05D004484 ORTHO05D005370 1.3e-232 810.1 704 60.4
AL1G54570 Arabidopsis lyrata HOM05D004484 ORTHO05D005370 1.3e-230 803.5 672 58.9
CARHR037700 Cardamine hirsuta HOM05D004484 ORTHO05D005370 6.3e-230 801.2 690 58.6
A08p05330 Brassica napus HOM05D004484 ORTHO05D005370 2.0e-228 796.2 670 58.2
SHI13523 Sapria himalayana HOM05D004484 ORTHO05D005370 2.6e-228 795.8 665 61.7
Hund27347 Selenicereus undatus HOM05D004484 ORTHO05D005370 3.2e-226 788.9 603 66.8
Zm00001eb064930 Zea mays HOM05D004484 ORTHO05D005370 6.9e-221 771.2 672 58.6
HPP92_027818 Vanilla planifolia HOM05D004484 ORTHO05D005370 4.8e-214 748.4 688 56.8
COL.COLO4_07018 Corchorus olitorius HOM05D004484 ORTHO05D005370 6.3e-214 748.0 556 68.0
COL.COLO4_12548 Corchorus olitorius HOM05D004484 ORTHO05D005370 1.5e-199 700.3 713 52.9
arahy.Tifrunner.gnm1.ann1.5WGS6V Arachis hypogaea HOM05D004484 ORTHO05D005370 5.7e-199 698.4 662 57.9
arahy.Tifrunner.gnm1.ann1.03ZR4A Arachis hypogaea HOM05D004484 ORTHO05D005370 7.5e-199 698.0 706 55.1
Potri.002G148200 Populus trichocarpa HOM05D004484 ORTHO05D005370 4.0e-192 675.6 493 69.2
unitig_749.g13780 Utricularia gibba HOM05D004484 ORTHO05D005370 5.2e-192 675.2 574 61.7
arahy.Tifrunner.gnm1.ann1.5492A7 Arachis hypogaea HOM05D004484 ORTHO05D005370 5.5e-186 655.2 677 54.9
Hma1.2p1_0086F.1_g044880 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 1.0e-184 651.0 459 71.9
Lj9C569T11 Lonicera japonica HOM05D004484 ORTHO05D005370 6.3e-182 641.7 466 69.5
Pp3c22_11100 Physcomitrium patens HOM05D004484 ORTHO05D005370 4.1e-181 639.0 689 48.6
ATR0049G077 Amborella trichopoda HOM05D004484 ORTHO05D005370 1.6e-180 637.1 458 67.9
CDE04G3156 Ceratophyllum demersum HOM05D004484 ORTHO05D005370 3.5e-180 636.0 672 51.0
arahy.Tifrunner.gnm1.ann1.T9R8PC Arachis hypogaea HOM05D004484 ORTHO05D005370 3.6e-177 625.9 681 53.0
Thhalv10011351m.g Eutrema salsugineum HOM05D004484 ORTHO05D005370 6.8e-176 621.7 653 50.5
SMO367G0514 Selaginella moellendorffii HOM05D004484 ORTHO05D005370 3.7e-174 615.9 690 46.1
Aa31LG10G5650 Aethionema arabicum HOM05D004484 ORTHO05D005370 8.3e-174 614.8 584 54.6
Mapoly0129s0012 Marchantia polymorpha HOM05D004484 ORTHO05D005370 3.7e-166 589.3 633 47.6
PGR119G1536 Punica granatum HOM05D004484 ORTHO05D005370 6.0e-164 582.0 516 58.5
RcHm_v2.0_Chr1g0350581 Rosa chinensis HOM05D004484 ORTHO05D005370 1.4e-160 570.9 381 72.2
AagrBONN_evm.TU.Sc2ySwM_368.3373 Anthoceros agrestis HOM05D004484 ORTHO05D005370 5.2e-152 542.3 689 42.2
CBR_g30081 Chara braunii HOM05D004484 ORTHO05D005370 2.9e-118 430.3 466 46.4
RcHm_v2.0_Chr1g0350571 Rosa chinensis HOM05D004484 ORTHO05D005370 2.4e-104 384.0 297 64.6
SHI38996 Sapria himalayana HOM05D004484 ORTHO05D005370 4.0e-83 313.5 204 74.5
Hma1.2p1_0701F.1_g205850 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 4.2e-77 293.5 268 60.4
SHI38095 Sapria himalayana HOM05D004484 ORTHO05D005370 1.5e-74 285.0 189 74.1
SHI38094 Sapria himalayana HOM05D004484 ORTHO05D005370 8.0e-60 236.1 211 56.9
arahy.Tifrunner.gnm1.ann1.47H85H Arachis hypogaea HOM05D004484 ORTHO05D005370 3.9e-54 217.2 335 40.3
Glyma.01G142851 Glycine max HOM05D004484 ORTHO05D005370 9.5e-53 212.6 164 65.9
Glyma.06G243967 Glycine max HOM05D004484 ORTHO05D005370 3.6e-52 210.7 143 67.1
SEGI_20047 Sequoiadendron giganteum HOM05D004484 ORTHO05D005370 1.2e-50 205.7 228 46.5
MCO15G158 Micromonas commoda HOM05D004484 ORTHO05D005370 7.8e-47 193.0 522 29.5
Carub.0004s0917 Capsella rubella HOM05D004484 ORTHO05D005370 8.3e-41 172.9 253 42.7
Hma1.2p1_0170F.1_g075250 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 3.5e-39 167.5 202 51.0
SHI38995 Sapria himalayana HOM05D004484 ORTHO05D005370 5.6e-37 160.2 126 63.5
CAN.G594.7 Capsicum annuum HOM05D004484 ORTHO05D005370 1.2e-36 159.1 105 74.3
Glyma.17G005802 Glycine max HOM05D004484 ORTHO05D005370 1.2e-36 159.1 192 50.5
SEGI_29754 Sequoiadendron giganteum HOM05D004484 ORTHO05D005370 1.2e-36 159.1 116 68.1
SGA_v2.0_scaffold65G22170 Striga asiatica HOM05D004484 ORTHO05D005370 1.3e-33 149.1 201 43.8
TPR.G22633 Trifolium pratense HOM05D004484 ORTHO05D005370 1.6e-31 142.1 92 75.0
QL08p052505 Quercus lobata HOM05D004484 ORTHO05D005370 4.6e-31 140.6 176 46.0
CAN.G205.22 Capsicum annuum HOM05D004484 ORTHO05D005370 6.6e-30 136.7 96 68.8
Os03g0856200 Oryza sativa ssp. japonica HOM05D004484 ORTHO05D005370 1.9e-29 135.2 97 66.0
Eucgr.I00725 Eucalyptus grandis HOM05D004484 ORTHO05D005370 9.9e-26 122.9 82 69.5
Aa31LG10G5660 Aethionema arabicum HOM05D004484 ORTHO05D005370 1.3e-25 122.5 94 57.4
Solyc01g091430.2 Solanum lycopersicum HOM05D004484 ORTHO05D005370 2.3e-22 111.7 95 60.0
CAN.G279.6 Capsicum annuum HOM05D004484 ORTHO05D005370 2.8e-20 104.8 72 72.2
CAN.G388.14 Capsicum annuum HOM05D004484 ORTHO05D005370 4.8e-20 104.0 76 61.8
SGA_v2.0_scaffold10G05342 Striga asiatica HOM05D004484 ORTHO05D005370 1.8e-19 102.1 184 37.0
SGA_v2.0_scaffold172G39032 Striga asiatica HOM05D004484 ORTHO05D005370 6.9e-19 100.1 168 38.7
SGA_v2.0_scaffold29G12247 Striga asiatica HOM05D004484 ORTHO05D005370 3.8e-17 94.4 186 36.0
TPR.G9848 Trifolium pratense HOM05D000164 ORTHO05D000096 1.9e-16 92.0 55 76.4
Glyma.06G243934 Glycine max HOM05D004484 ORTHO05D005370 3.2e-16 91.3 81 55.6
PRCOL_00002704 Prasinoderma coloniale HOM05D004484 ORTHO05D005370 4.2e-16 90.9 261 30.3
Glyma.06G244302 Glycine max HOM05D004484 ORTHO05D005370 2.1e-15 88.6 117 45.3
Eucgr.E01421 Eucalyptus grandis HOM05D004484 ORTHO05D005370 2.7e-15 88.2 63 68.3
Eucgr.L02075 Eucalyptus grandis HOM05D004484 ORTHO05D005370 1.0e-14 86.3 63 68.3
CAN.G321.48 Capsicum annuum HOM05D001267 ORTHO05D002376 1.8e-14 85.5 80 58.8
Solyc01g091440.4 Solanum lycopersicum HOM05D004484 ORTHO05D005370 5.1e-14 84.0 133 39.8
Cfa025796 Carpinus fangiana HOM05D004484 ORTHO05D005370 5.6e-13 80.5 377 24.4
arahy.Tifrunner.gnm1.ann1.0F06NC Arachis hypogaea HOM05D004484 ORTHO05D005370 2.0e-10 72.0 47 68.1
Cre10.g423800 Chlamydomonas reinhardtii HOM05D004484 ORTHO05D005370 7.6e-10 70.1 542 22.3
AagrBONN_evm.TU.Sc2ySwM_368.3370 Anthoceros agrestis HOM05D004484 ORTHO05D005370 1.1e-08 66.2 131 31.3
Hma1.2p1_1470F.1_g285600 Hydrangea macrophylla HOM05D000467 ORTHO05D011800 1.2e-07 62.8 53 60.4


User provided reference genes

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