Gene: Solyc01g091440.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g091440.4
  • Transcript Identifier Solyc01g091440.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 77301516-77302519 : negative

Gene Family Information

  • ID HOM05D004484
  • #Genes/#Species 160/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g091440.4.1
  • gene_id Solyc01g091440

Descriptions

  • Description ATP-dependent DNA helicase 2 subunit KU80 (AHRD V3.3 *-* A0A2G2XNV2_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006310
ISO
PLAZA Homology (enrichment)DNA recombination HOM05D004484
GO:0000723
ISO
PLAZA Homology (enrichment)telomere maintenance HOM05D004484
GO:0006303
ISO
PLAZA Homology (enrichment)double-strand break repair via nonhomologous end joining HOM05D004484

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
ISO
PLAZA Homology (enrichment)DNA binding HOM05D004484
GO:0003678
ISO
PLAZA Homology (enrichment)DNA helicase activity HOM05D004484
GO:0042162
ISO
PLAZA Homology (enrichment)telomeric DNA binding HOM05D004484
GO:0003684
ISO
PLAZA Homology (enrichment)damaged DNA binding HOM05D004484

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Homology (enrichment)nucleus HOM05D004484
GO:0043564
ISO
PLAZA Homology (enrichment)Ku70:Ku80 complex HOM05D004484

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016194 SPOC-like, C-terminal domain superfamily
Mapman id Description
35.1 not assigned.annotated