Gene: Nitab4.5_0005372g0070
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0005372g0070
- Transcript Identifier Nitab4.5_0005372g0070.1
- Gene Type Coding gene
- Location Nitab4.5_0005372 : 34298-43189 : negative
Gene Family Information
- ID HOM05D004484
- #Genes/#Species 160/96
- Phylogenetic origin
- ID ORTHO05D005370
- #Genes/#Species 159/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Nitab4.5_0005372g0070.1
- SR1-identifier Nta01g06750.1
Descriptions
- Description Ku70/Ku80, N-terminal alpha/beta, SPOC like C-terminal domain, Ku70/Ku80 C-terminal arm, Ku70/Ku80 beta-barrel domain, Ku, C-terminal, Ku80, von Willebrand factor, type A
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000723 | IEA | InterPro | telomere maintenance | |
| GO:0006303 | IEA | InterPro | double-strand break repair via nonhomologous end joining | |
| GO:0006310 | IEA | InterPro | DNA recombination | |
| GO:0006281 | ISO | PLAZA Integrative Orthology | DNA repair | AT1G48050 |
| GO:0009408 | ISO | PLAZA Integrative Orthology | response to heat | AT1G48050 |
| GO:0015074 | ISO | PLAZA Integrative Orthology | DNA integration | AT1G48050 |
| GO:0006302 | ISO | PLAZA Integrative Orthology | double-strand break repair | AT1G48050 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003684 | IEA | InterPro | damaged DNA binding | |
| GO:0042162 | IEA | InterPro | telomeric DNA binding | |
| GO:0003678 | IEA | InterPro | DNA helicase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G48050 |
| GO:0003690 | ISO | PLAZA Integrative Orthology | double-stranded DNA binding | AT1G48050 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0043564 | IEA | InterPro | Ku70:Ku80 complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR024193 | Ku80 |
| IPR036494 | Ku, C-terminal domain superfamily |
| IPR005161 | Ku70/Ku80, N-terminal alpha/beta |
| IPR036465 | von Willebrand factor A-like domain superfamily |
| IPR006164 | Ku70/Ku80 beta-barrel domain |
| IPR016194 | SPOC-like, C-terminal domain superfamily |
| IPR014893 | Ku, C-terminal |
| IPR005160 | Ku70/Ku80 C-terminal arm |
| Mapman id | Description |
|---|---|
| 14.4.1.2 | DNA damage response.nonhomologous end-joining (NHEJ) repair.Ku70-Ku80 helicase complex.component KU80 |