Gene: PRCOL_00002704

General Information

Structural Information

  • Species Prasinoderma coloniale
  • Gene Identifier PRCOL_00002704
  • Transcript Identifier PRCOL_00002704-RA
  • Gene Type Coding gene
  • Location Chr4 : 879029-881404 : positive

Gene Family Information

  • ID HOM05D004484
  • #Genes/#Species 160/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid PRCOL_00002704-RA

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006303
IEA
InterProdouble-strand break repair via nonhomologous end joining
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT1G48050
GO:0015074
ISO
PLAZA Integrative OrthologyDNA integration AT1G48050
GO:0006310
ISO
PLAZA Homology (enrichment)DNA recombination HOM05D004484
GO:0000723
ISO
PLAZA Integrative Orthologytelomere maintenance AT1G48050
GO:0006302
ISO
PLAZA Integrative Orthologydouble-strand break repair AT1G48050
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT1G48050

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003690
ISO
PLAZA Integrative Orthologydouble-stranded DNA binding AT1G48050
GO:0003684
ISO
PLAZA Homology (enrichment)damaged DNA binding HOM05D004484
GO:0003678
ISO
PLAZA Homology (enrichment)DNA helicase activity HOM05D004484
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G48050
GO:0042162
ISO
PLAZA Homology (enrichment)telomeric DNA binding HOM05D004484

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043564
ISO
PLAZA Homology (enrichment)Ku70:Ku80 complex HOM05D004484
GO:0005634
ISO
PLAZA Homology (enrichment)nucleus HOM05D004484

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036494 Ku, C-terminal domain superfamily
IPR006164 Ku70/Ku80 beta-barrel domain
IPR014893 Ku, C-terminal
IPR016194 SPOC-like, C-terminal domain superfamily
IPR036465 von Willebrand factor A-like domain superfamily
Mapman id Description
14.4.1.2 DNA damage response.nonhomologous end-joining (NHEJ) repair.Ku70-Ku80 helicase complex.component KU80