Gene: Solyc01g091430.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g091430.2
  • Transcript Identifier Solyc01g091430.2.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 77300544-77301137 : negative

Gene Family Information

  • ID HOM05D004484
  • #Genes/#Species 160/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g091430.2.1
  • uniprot A0A3Q7EKA0
  • gene_id Solyc01g091430

Descriptions

  • Description ATP-dependent DNA helicase 2 subunit KU80 (AHRD V3.3 *-* A0A2G3AH96_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071480
IBA
GOA Databasecellular response to gamma radiation
GO:0071481
IBA
GOA Databasecellular response to X-ray
GO:0006303
IBA
GOA Databasedouble-strand break repair via nonhomologous end joining
GO:0000723
IBA
GOA Databasetelomere maintenance
GO:0006310
ISO
PLAZA Homology (enrichment)DNA recombination HOM05D004484

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003690
IBA
GOA Databasedouble-stranded DNA binding
GO:0042162
IBA
GOA Databasetelomeric DNA binding
GO:0003677
ISO
PLAZA Homology (enrichment)DNA binding HOM05D004484
GO:0003678
ISO
PLAZA Homology (enrichment)DNA helicase activity HOM05D004484
GO:0003684
ISO
PLAZA Homology (enrichment)damaged DNA binding HOM05D004484

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043564
IBA
GOA DatabaseKu70:Ku80 complex
GO:0005634
ISO
PLAZA Homology (enrichment)nucleus HOM05D004484

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036494 Ku, C-terminal domain superfamily
IPR014893 Ku, C-terminal
Mapman id Description
35.1 not assigned.annotated