Gene: PGR119G1536

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR119G1536
  • Transcript Identifier PGR119G1536.04
  • Gene Type Coding gene
  • Location NC_045132.1 : 27241120-27244320 : negative

Gene Family Information

  • ID HOM05D004484
  • #Genes/#Species 160/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031400879.1
  • name LOC116210894
  • name XM_031545019.1
  • id gene-LOC116210894
  • uniprot A0A2I0HHL0

Descriptions

  • product ATP-dependent DNA helicase 2 subunit KU80-like, transcript variant X2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006302
ISO
PLAZA Integrative Orthologydouble-strand break repair AT1G48050
GO:0015074
ISO
PLAZA Integrative OrthologyDNA integration AT1G48050
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT1G48050
GO:0000723
IEA
GOA Databasetelomere maintenance
GO:0000723
IEA
InterProtelomere maintenance
GO:0006303
IEA
GOA Databasedouble-strand break repair via nonhomologous end joining
GO:0006303
IEA
InterProdouble-strand break repair via nonhomologous end joining
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0006310
IEA
GOA DatabaseDNA recombination
GO:0006310
IEA
InterProDNA recombination
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0032508
IEA
GOA DatabaseDNA duplex unwinding

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003690
ISO
PLAZA Integrative Orthologydouble-stranded DNA binding AT1G48050
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G48050
GO:0042162
IEA
GOA Databasetelomeric DNA binding
GO:0042162
IEA
InterProtelomeric DNA binding
GO:0003678
IEA
GOA DatabaseDNA helicase activity
GO:0003684
IEA
GOA Databasedamaged DNA binding
GO:0003684
IEA
InterProdamaged DNA binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043564
IEA
GOA DatabaseKu70:Ku80 complex
GO:0043564
IEA
InterProKu70:Ku80 complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016194 SPOC-like, C-terminal domain superfamily
IPR006164 Ku70/Ku80 beta-barrel domain
IPR005161 Ku70/Ku80, N-terminal alpha/beta
IPR036465 von Willebrand factor A-like domain superfamily
IPR024193 Ku80
Mapman id Description
14.4.1.2 DNA damage response.nonhomologous end-joining (NHEJ) repair.Ku70-Ku80 helicase complex.component KU80