Gene: PGSC0003DMG400012761

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400012761
  • Transcript Identifier PGSC0003DMT400033230
  • Gene Type Coding gene
  • Location ST4.03ch01 : 70738506-70744275 : negative

Gene Family Information

  • ID HOM05D004484
  • #Genes/#Species 160/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37440278
  • id PGSC0003DMG400012761.v4.03
  • uniprot M1AYS8

Descriptions

  • Description Ku P80 DNA helicase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006303
IBA
IEA
GOA Databasedouble-strand break repair via nonhomologous end joining
GO:0006303
IEA
InterProdouble-strand break repair via nonhomologous end joining
GO:0000723
IBA
IEA
GOA Databasetelomere maintenance
GO:0000723
IEA
InterProtelomere maintenance
GO:0071480
IBA
GOA Databasecellular response to gamma radiation
GO:0071481
IBA
GOA Databasecellular response to X-ray
GO:0009408
IEA
GOA Databaseresponse to heat
GO:0006302
IEA
GOA Databasedouble-strand break repair
GO:0015074
ISO
PLAZA Integrative OrthologyDNA integration AT1G48050
GO:0032508
IEA
GOA DatabaseDNA duplex unwinding
GO:0006310
IEA
GOA DatabaseDNA recombination
GO:0006310
IEA
InterProDNA recombination
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003690
IBA
IEA
GOA Databasedouble-stranded DNA binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0003684
IEA
GOA Databasedamaged DNA binding
GO:0003684
IEA
InterProdamaged DNA binding
GO:0042162
IBA
IEA
GOA Databasetelomeric DNA binding
GO:0042162
IEA
InterProtelomeric DNA binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G48050
GO:0003678
IEA
GOA DatabaseDNA helicase activity
GO:0003678
IEA
InterProDNA helicase activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043564
IBA
IEA
GOA DatabaseKu70:Ku80 complex
GO:0043564
IEA
InterProKu70:Ku80 complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036465 von Willebrand factor A-like domain superfamily
IPR016194 SPOC-like, C-terminal domain superfamily
IPR036494 Ku, C-terminal domain superfamily
IPR014893 Ku, C-terminal
IPR006164 Ku70/Ku80 beta-barrel domain
IPR024193 Ku80
IPR005161 Ku70/Ku80, N-terminal alpha/beta
IPR005160 Ku70/Ku80 C-terminal arm
Mapman id Description
14.4.1.2 DNA damage response.nonhomologous end-joining (NHEJ) repair.Ku70-Ku80 helicase complex.component KU80