Gene: Pp3c22_11100

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c22_11100
  • Transcript Identifier Pp3c22_11100V3.2
  • Gene Type Coding gene
  • Location Chr22 : 7032489-7037438 : positive

Gene Family Information

  • ID HOM05D004484
  • #Genes/#Species 160/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c22_11100V3.2
  • pacid 32904135
  • alias Phpat.022G041700
  • alias Phypa_188592
  • alias Pp1s121_27V6
  • uniprot A0A2K1IN28

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006303
IBA
IEA
GOA Databasedouble-strand break repair via nonhomologous end joining
GO:0006303
IEA
InterProdouble-strand break repair via nonhomologous end joining
GO:0000723
IBA
IEA
GOA Databasetelomere maintenance
GO:0000723
IEA
InterProtelomere maintenance
GO:0071480
IBA
GOA Databasecellular response to gamma radiation
GO:0071481
IBA
GOA Databasecellular response to X-ray
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT1G48050
GO:0015074
ISO
PLAZA Integrative OrthologyDNA integration AT1G48050
GO:0006302
ISO
PLAZA Integrative Orthologydouble-strand break repair AT1G48050
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006310
IEA
GOA DatabaseDNA recombination
GO:0006310
IEA
InterProDNA recombination
GO:0032508
IEA
GOA DatabaseDNA duplex unwinding
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004386
IEA
GOA Databasehelicase activity
GO:0003684
IEA
GOA Databasedamaged DNA binding
GO:0003684
IEA
InterProdamaged DNA binding
GO:0042162
IBA
IEA
GOA Databasetelomeric DNA binding
GO:0042162
IEA
InterProtelomeric DNA binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003690
IBA
GOA Databasedouble-stranded DNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G48050
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0003678
IEA
GOA DatabaseDNA helicase activity
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043564
IBA
IEA
GOA DatabaseKu70:Ku80 complex
GO:0043564
IEA
InterProKu70:Ku80 complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014893 Ku, C-terminal
IPR024193 Ku80
IPR036465 von Willebrand factor A-like domain superfamily
IPR036494 Ku, C-terminal domain superfamily
IPR005161 Ku70/Ku80, N-terminal alpha/beta
IPR016194 SPOC-like, C-terminal domain superfamily
IPR006164 Ku70/Ku80 beta-barrel domain
Mapman id Description
14.4.1.2 DNA damage response.nonhomologous end-joining (NHEJ) repair.Ku70-Ku80 helicase complex.component KU80