Gene: RcHm_v2.0_Chr1g0350581

General Information

Structural Information

  • Species Rosa chinensis
  • Gene Identifier RcHm_v2.0_Chr1g0350581
  • Transcript Identifier RcHm_v2.0_Chr1g0350581
  • Gene Type Coding gene
  • Location RcHm_v2.0_Chr1 : 43715449-43717918 : negative

Gene Family Information

  • ID HOM05D004484
  • #Genes/#Species 160/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006303
IEA
InterProdouble-strand break repair via nonhomologous end joining
GO:0000723
IEA
InterProtelomere maintenance
GO:0006310
IEA
InterProDNA recombination
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT1G48050
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT1G48050
GO:0015074
ISO
PLAZA Integrative OrthologyDNA integration AT1G48050
GO:0006302
ISO
PLAZA Integrative Orthologydouble-strand break repair AT1G48050

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003684
IEA
InterProdamaged DNA binding
GO:0042162
IEA
InterProtelomeric DNA binding
GO:0003678
ISO
PLAZA Homology (enrichment)DNA helicase activity HOM05D004484
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G48050
GO:0003690
ISO
PLAZA Integrative Orthologydouble-stranded DNA binding AT1G48050

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0043564
IEA
InterProKu70:Ku80 complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036465 von Willebrand factor A-like domain superfamily
IPR006164 Ku70/Ku80 beta-barrel domain
IPR024193 Ku80
IPR005161 Ku70/Ku80, N-terminal alpha/beta
IPR016194 SPOC-like, C-terminal domain superfamily
Mapman id Description
14.4.1.2 DNA damage response.nonhomologous end-joining (NHEJ) repair.Ku70-Ku80 helicase complex.component KU80