Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.20748 Avicennia marina HOM05D004484 ORTHO05D005370 0.0e+00 1364.7 691 100.0
SGA_v2.0_scaffold153G37012 Striga asiatica HOM05D004484 ORTHO05D005370 0.0e+00 1103.2 693 78.5
Migut.B01635 Erythranthe guttata HOM05D004484 ORTHO05D005370 0.0e+00 1086.2 691 79.6
Oeu055487.1 Olea europaea HOM05D004484 ORTHO05D005370 3.7e-307 1057.7 688 76.2
Cc02_g36700 Coffea canephora HOM05D004484 ORTHO05D005370 2.6e-300 1035.0 693 75.2
Dinv32377 Davidia involucrata HOM05D004484 ORTHO05D005370 7.5e-300 1033.5 693 73.9
Nitab4.5_0000457g0330 Nicotiana tabacum HOM05D004484 ORTHO05D005370 6.3e-299 1030.4 691 74.2
PGSC0003DMG400012761 Solanum tuberosum HOM05D004484 ORTHO05D005370 1.9e-295 1018.8 685 74.2
CAN.G388.13 Capsicum annuum HOM05D004484 ORTHO05D005370 9.5e-295 1016.5 681 74.0
Peaxi162Scf00021g01723 Petunia axillaris HOM05D004484 ORTHO05D005370 2.3e-293 1011.9 685 73.1
Lj7A528T57 Lonicera japonica HOM05D004484 ORTHO05D005370 2.8e-291 1005.0 702 71.7
QL08p052472 Quercus lobata HOM05D004484 ORTHO05D005370 3.1e-290 1001.5 687 72.5
GSVIVG01027610001 Vitis vinifera HOM05D004484 ORTHO05D005370 1.2e-289 999.6 673 72.5
Nitab4.5_0005372g0070 Nicotiana tabacum HOM05D004484 ORTHO05D005370 1.7e-288 995.7 701 71.5
Prupe.2G145600 Prunus persica HOM05D004484 ORTHO05D005370 5.0e-288 994.2 687 71.9
Hma1.2p1_0086F.1_g044870 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 2.5e-287 991.9 686 72.9
ECA234G1700 Erigeron canadensis HOM05D004484 ORTHO05D005370 2.8e-286 988.4 684 71.6
CiPaw.01G262000 Carya illinoinensis HOM05D004484 ORTHO05D005370 1.4e-285 986.1 690 70.0
Solyc01g091350.4 Solanum lycopersicum HOM05D004484 ORTHO05D005370 2.3e-285 985.3 685 71.7
Sopen01g037090 Solanum pennellii HOM05D004484 ORTHO05D005370 1.3e-283 979.5 685 71.1
TWI23G0227 Tripterygium wilfordii HOM05D004484 ORTHO05D005370 6.4e-283 977.2 693 70.6
MD07G1121000 Malus domestica HOM05D004484 ORTHO05D005370 1.0e-280 969.9 688 70.3
Potri.014G069700 Populus trichocarpa HOM05D004484 ORTHO05D005370 1.0e-280 969.9 682 71.4
HanXRQChr16g0520161 Helianthus annuus HOM05D004484 ORTHO05D005370 1.3e-280 969.5 687 70.2
Sc02g0002590 Simmondsia chinensis HOM05D004484 ORTHO05D005370 1.9e-279 965.7 670 71.5
Nn1g01233 Nelumbo nucifera HOM05D004484 ORTHO05D005370 9.5e-279 963.4 685 70.2
Sed0020955 Sechium edule HOM05D004484 ORTHO05D005370 9.5e-279 963.4 689 69.1
PSO478G5008 Papaver somniferum HOM05D004484 ORTHO05D005370 2.8e-278 961.8 692 69.8
DCAR_015907 Daucus carota HOM05D004484 ORTHO05D005370 6.2e-278 960.7 685 68.8
Atru.chr5.309 Acer truncatum HOM05D004484 ORTHO05D005370 2.0e-276 955.7 686 68.5
Manes.01G265900 Manihot esculenta HOM05D004484 ORTHO05D005370 2.0e-276 955.7 689 67.9
Aqoxy5G00403 Aquilegia oxysepala HOM05D004484 ORTHO05D005370 4.4e-276 954.5 690 68.6
Haze_16815 Corylus avellana HOM05D004484 ORTHO05D005370 4.4e-276 954.5 747 64.7
Eucgr.E01418 Eucalyptus grandis HOM05D004484 ORTHO05D005370 5.8e-276 954.1 690 68.3
TAR629G2468 Trochodendron aralioides HOM05D004484 ORTHO05D005370 3.7e-275 951.4 668 70.4
ClCG05G002220 Citrullus lanatus HOM05D004484 ORTHO05D005370 1.9e-274 949.1 690 68.1
CSS0036976 Camellia sinensis var. sinensis HOM05D004484 ORTHO05D005370 2.4e-274 948.7 694 69.6
Lalb_Chr13g0291731 Lupinus albus HOM05D004484 ORTHO05D005370 3.2e-274 948.3 690 68.8
Ca_19886_v3 Cicer arietinum L. HOM05D004484 ORTHO05D005370 7.0e-274 947.2 682 69.1
CsaV3_3G009680 Cucumis sativus L. HOM05D004484 ORTHO05D005370 1.2e-273 946.4 690 67.7
Medtr4g023560 Medicago truncatula HOM05D004484 ORTHO05D005370 7.8e-273 943.7 681 68.6
Thecc.01G376200 Theobroma cacao HOM05D004484 ORTHO05D005370 1.0e-272 943.3 687 67.8
FvH4_7g11900 Fragaria vesca HOM05D004484 ORTHO05D005370 2.3e-272 942.2 688 67.2
MBI12_g10758_MAGBIO Magnolia biondii HOM05D004484 ORTHO05D005370 6.6e-272 940.6 721 66.0
FAN01G0628 Fragaria x ananassa HOM05D004484 ORTHO05D005370 1.5e-271 939.5 688 67.0
Lsat_1_v5_gn_4_43240 Lactuca sativa HOM05D004484 ORTHO05D005370 1.9e-271 939.1 682 68.6
EL10Ac1g00900 Beta vulgaris HOM05D004484 ORTHO05D005370 1.2e-270 936.4 710 64.9
CANSAT56G4533 Cannabis sativa HOM05D004484 ORTHO05D005370 6.2e-270 934.1 691 67.7
FAN06G3319 Fragaria x ananassa HOM05D004484 ORTHO05D005370 1.8e-269 932.6 688 66.7
FAN10G1483 Fragaria x ananassa HOM05D004484 ORTHO05D005370 1.8e-269 932.6 688 66.9
Psat7g233440 Pisum sativum HOM05D004484 ORTHO05D005370 4.0e-269 931.4 687 67.2
FAN06G1787 Fragaria x ananassa HOM05D004484 ORTHO05D005370 6.8e-269 930.6 688 66.7
FAN10G2369 Fragaria x ananassa HOM05D004484 ORTHO05D005370 4.4e-268 927.9 688 66.6
CANSAT56G1200 Cannabis sativa HOM05D004484 ORTHO05D005370 7.5e-268 927.2 691 67.3
Ca_27059_v3 Cicer arietinum L. HOM05D004484 ORTHO05D005370 9.8e-268 926.8 682 68.0
Cpa.g.sc18.115 Carica papaya HOM05D004484 ORTHO05D005370 1.4e-266 922.9 691 66.6
Lj3g0013484 Lotus japonicus HOM05D004484 ORTHO05D005370 2.4e-266 922.2 683 67.2
MELO3C006188.2 Cucumis melo HOM05D004484 ORTHO05D005370 5.4e-266 921.0 655 69.0
AUR62004221 Chenopodium quinoa HOM05D004484 ORTHO05D005370 3.5e-265 918.3 721 64.6
arahy.Tifrunner.gnm1.ann1.V1M046 Arachis hypogaea HOM05D004484 ORTHO05D005370 1.0e-264 916.8 687 67.1
PGR042G0667 Punica granatum HOM05D004484 ORTHO05D005370 3.9e-264 914.8 691 66.0
arahy.Tifrunner.gnm1.ann1.6K85L9 Arachis hypogaea HOM05D004484 ORTHO05D005370 1.1e-263 913.3 687 67.0
arahy.Tifrunner.gnm1.ann1.HW1IVJ Arachis hypogaea HOM05D004484 ORTHO05D005370 1.1e-263 913.3 687 67.0
Lalb_Chr12g0208261 Lupinus albus HOM05D004484 ORTHO05D005370 7.3e-263 910.6 688 65.4
arahy.Tifrunner.gnm1.ann1.Q9SWB6 Arachis hypogaea HOM05D004484 ORTHO05D005370 1.6e-262 909.4 687 66.7
vmacro13399 Vaccinium macrocarpon HOM05D004484 ORTHO05D005370 2.8e-262 908.7 691 67.6
Gohir.A11G080700 Gossypium hirsutum HOM05D004484 ORTHO05D005370 8.9e-261 903.7 685 65.4
Gorai.007G091100 Gossypium raimondii HOM05D004484 ORTHO05D005370 2.0e-260 902.5 685 65.8
Ciclev10019016m.g Citrus clementina HOM05D004484 ORTHO05D005370 2.6e-260 902.1 690 66.1
Sabra14G0049400 Salix brachista HOM05D004484 ORTHO05D005370 5.8e-260 901.0 696 66.1
Gohir.D11G085300 Gossypium hirsutum HOM05D004484 ORTHO05D005370 1.7e-259 899.4 685 65.8
Glyma.05G125700 Glycine max HOM05D004484 ORTHO05D005370 3.2e-258 895.2 689 64.6
Phvul.002G205800 Phaseolus vulgaris HOM05D004484 ORTHO05D005370 6.2e-254 880.9 683 64.4
Ah.13g073490 Amaranthus hybridus HOM05D004484 ORTHO05D005370 4.4e-252 874.8 710 62.0
Aqoxy3G02138 Aquilegia oxysepala HOM05D004484 ORTHO05D005370 1.9e-250 869.4 690 63.5
VMungo0251G1206 Vigna mungo HOM05D004484 ORTHO05D005370 1.9e-250 869.4 683 62.5
GSVIVG01027609001 Vitis vinifera HOM05D004484 ORTHO05D005370 2.8e-246 855.5 660 65.0
FAN03G1897 Fragaria x ananassa HOM05D004484 ORTHO05D005370 6.2e-246 854.4 689 62.4
THA.LOC104817247 Tarenaya hassleriana HOM05D004484 ORTHO05D005370 1.4e-245 853.2 684 62.4
BcaB04g17469 Brassica carinata HOM05D004484 ORTHO05D005370 5.3e-245 851.3 688 60.5
Sp1g35020 Schrenkiella parvula HOM05D004484 ORTHO05D005370 3.4e-244 848.6 676 61.1
TPR.G9845 Trifolium pratense HOM05D004484 ORTHO05D005370 5.4e-242 841.3 712 61.0
AT1G48050 Arabidopsis thaliana HOM05D004484 ORTHO05D005370 1.6e-241 839.7 684 61.0
BolC8t47375H Brassica oleracea HOM05D004484 ORTHO05D005370 1.6e-241 839.7 684 60.1
BcaC07g37180 Brassica carinata HOM05D004484 ORTHO05D005370 2.1e-241 839.3 690 60.1
BraSC267t45947Z Brassica rapa HOM05D004484 ORTHO05D005370 2.1e-241 839.3 684 59.8
C08p05620 Brassica napus HOM05D004484 ORTHO05D005370 4.6e-241 838.2 684 59.9
Carub.0001s3716 Capsella rubella HOM05D004484 ORTHO05D005370 8.7e-240 833.9 686 59.6
Cfa001721 Carpinus fangiana HOM05D004484 ORTHO05D005370 1.3e-238 830.1 585 70.1
CARHR037700 Cardamine hirsuta HOM05D004484 ORTHO05D005370 4.8e-238 828.2 688 60.5
AUR62013627 Chenopodium quinoa HOM05D004484 ORTHO05D005370 9.9e-236 820.5 705 60.4
A08p05330 Brassica napus HOM05D004484 ORTHO05D005370 1.3e-235 820.1 666 60.5
SHI13523 Sapria himalayana HOM05D004484 ORTHO05D005370 1.6e-233 813.1 660 63.6
AL1G54570 Arabidopsis lyrata HOM05D004484 ORTHO05D005370 2.7e-233 812.4 672 59.5
Hund27347 Selenicereus undatus HOM05D004484 ORTHO05D005370 2.1e-225 786.2 606 66.0
COL.COLO4_07018 Corchorus olitorius HOM05D004484 ORTHO05D005370 1.1e-218 763.8 551 68.6
Zm00001eb064930 Zea mays HOM05D004484 ORTHO05D005370 5.1e-216 755.0 665 57.3
HPP92_027818 Vanilla planifolia HOM05D004484 ORTHO05D005370 7.4e-215 751.1 685 57.8
unitig_749.g13780 Utricularia gibba HOM05D004484 ORTHO05D005370 2.1e-209 733.0 568 65.3
arahy.Tifrunner.gnm1.ann1.5WGS6V Arachis hypogaea HOM05D004484 ORTHO05D005370 8.8e-200 701.0 658 56.2
arahy.Tifrunner.gnm1.ann1.03ZR4A Arachis hypogaea HOM05D004484 ORTHO05D005370 7.4e-199 698.0 701 53.4
COL.COLO4_12548 Corchorus olitorius HOM05D004484 ORTHO05D005370 1.7e-198 696.8 708 53.1
Potri.002G148200 Populus trichocarpa HOM05D004484 ORTHO05D005370 1.5e-194 683.7 488 71.1
Hma1.2p1_0086F.1_g044880 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 2.9e-187 659.4 459 72.3
arahy.Tifrunner.gnm1.ann1.5492A7 Arachis hypogaea HOM05D004484 ORTHO05D005370 5.0e-187 658.7 680 53.8
Lj9C569T11 Lonicera japonica HOM05D004484 ORTHO05D005370 1.0e-184 651.0 466 69.1
Pp3c22_11100 Physcomitrium patens HOM05D004484 ORTHO05D005370 5.2e-184 648.7 705 48.9
Thhalv10011351m.g Eutrema salsugineum HOM05D004484 ORTHO05D005370 2.4e-181 639.8 651 52.1
Aa31LG10G5650 Aethionema arabicum HOM05D004484 ORTHO05D005370 3.1e-181 639.4 580 56.7
arahy.Tifrunner.gnm1.ann1.T9R8PC Arachis hypogaea HOM05D004484 ORTHO05D005370 9.5e-178 627.9 676 51.6
ATR0049G077 Amborella trichopoda HOM05D004484 ORTHO05D005370 2.1e-177 626.7 457 65.9
SMO367G0514 Selaginella moellendorffii HOM05D004484 ORTHO05D005370 1.3e-174 617.5 695 47.5
CDE04G3156 Ceratophyllum demersum HOM05D004484 ORTHO05D005370 4.9e-174 615.5 675 49.2
Mapoly0129s0012 Marchantia polymorpha HOM05D004484 ORTHO05D005370 1.5e-167 594.0 638 47.2
PGR119G1536 Punica granatum HOM05D004484 ORTHO05D005370 2.0e-159 567.0 516 56.2
RcHm_v2.0_Chr1g0350581 Rosa chinensis HOM05D004484 ORTHO05D005370 3.2e-157 559.7 381 70.9
AagrBONN_evm.TU.Sc2ySwM_368.3373 Anthoceros agrestis HOM05D004484 ORTHO05D005370 1.1e-149 534.6 689 41.2
CBR_g30081 Chara braunii HOM05D004484 ORTHO05D005370 2.8e-113 413.7 457 45.5
RcHm_v2.0_Chr1g0350571 Rosa chinensis HOM05D004484 ORTHO05D005370 5.9e-103 379.4 301 64.1
SHI38996 Sapria himalayana HOM05D004484 ORTHO05D005370 5.3e-88 329.7 202 77.7
SHI38095 Sapria himalayana HOM05D004484 ORTHO05D005370 1.3e-78 298.5 190 75.3
Hma1.2p1_0701F.1_g205850 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 8.5e-78 295.8 268 61.6
SHI38094 Sapria himalayana HOM05D004484 ORTHO05D005370 3.8e-62 243.8 211 58.8
arahy.Tifrunner.gnm1.ann1.47H85H Arachis hypogaea HOM05D004484 ORTHO05D005370 2.3e-59 234.6 340 43.2
Glyma.06G243967 Glycine max HOM05D004484 ORTHO05D005370 5.7e-58 229.9 144 71.5
Glyma.01G142851 Glycine max HOM05D004484 ORTHO05D005370 1.2e-50 205.7 164 64.0
SEGI_20047 Sequoiadendron giganteum HOM05D004484 ORTHO05D005370 1.0e-46 192.6 221 45.2
Carub.0004s0917 Capsella rubella HOM05D004484 ORTHO05D005370 1.7e-41 175.3 253 42.7
MCO15G158 Micromonas commoda HOM05D004484 ORTHO05D005370 3.7e-41 174.1 527 27.9
Hma1.2p1_0170F.1_g075250 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 1.1e-40 172.6 202 51.0
Glyma.17G005802 Glycine max HOM05D004484 ORTHO05D005370 6.0e-39 166.8 192 51.6
SHI38995 Sapria himalayana HOM05D004484 ORTHO05D005370 1.9e-37 161.8 126 65.1
CAN.G594.7 Capsicum annuum HOM05D004484 ORTHO05D005370 3.3e-37 161.0 104 76.9
SEGI_29754 Sequoiadendron giganteum HOM05D004484 ORTHO05D005370 1.8e-35 155.2 115 66.1
TPR.G22633 Trifolium pratense HOM05D004484 ORTHO05D005370 2.3e-35 154.8 92 79.3
SGA_v2.0_scaffold65G22170 Striga asiatica HOM05D004484 ORTHO05D005370 4.4e-34 150.6 201 43.3
CAN.G205.22 Capsicum annuum HOM05D004484 ORTHO05D005370 7.5e-34 149.8 96 74.0
QL08p052505 Quercus lobata HOM05D004484 ORTHO05D005370 3.7e-33 147.5 181 47.0
Solyc01g091430.2 Solanum lycopersicum HOM05D004484 ORTHO05D005370 5.2e-27 127.1 93 67.7
Eucgr.I00725 Eucalyptus grandis HOM05D004484 ORTHO05D005370 6.8e-27 126.7 81 72.8
Aa31LG10G5660 Aethionema arabicum HOM05D004484 ORTHO05D005370 3.8e-25 120.9 94 61.7
Os03g0856200 Oryza sativa ssp. japonica HOM05D004484 ORTHO05D005370 3.8e-25 120.9 97 58.8
CAN.G388.14 Capsicum annuum HOM05D004484 ORTHO05D005370 3.2e-24 117.9 76 68.4
CAN.G279.6 Capsicum annuum HOM05D004484 ORTHO05D005370 2.7e-23 114.8 72 77.8
SGA_v2.0_scaffold10G05342 Striga asiatica HOM05D004484 ORTHO05D005370 1.1e-19 102.8 183 36.6
SGA_v2.0_scaffold172G39032 Striga asiatica HOM05D004484 ORTHO05D005370 5.3e-19 100.5 167 38.3
SGA_v2.0_scaffold29G12247 Striga asiatica HOM05D004484 ORTHO05D005370 9.9e-18 96.3 187 36.9
Solyc01g091440.4 Solanum lycopersicum HOM05D004484 ORTHO05D005370 5.4e-16 90.5 133 44.4
Glyma.06G243934 Glycine max HOM05D004484 ORTHO05D005370 5.1e-14 84.0 81 50.6
PRCOL_00002704 Prasinoderma coloniale HOM05D004484 ORTHO05D005370 1.5e-13 82.4 260 29.6
TPR.G9848 Trifolium pratense HOM05D000164 ORTHO05D000096 2.5e-13 81.6 55 65.5
Glyma.06G244302 Glycine max HOM05D004484 ORTHO05D005370 4.3e-13 80.9 117 41.0
CAN.G321.48 Capsicum annuum HOM05D001267 ORTHO05D002376 1.3e-12 79.3 61 67.2
Eucgr.E01421 Eucalyptus grandis HOM05D004484 ORTHO05D005370 1.2e-10 72.8 66 53.0
Eucgr.L02075 Eucalyptus grandis HOM05D004484 ORTHO05D005370 2.0e-10 72.0 66 54.5
Oeu032522.1 Olea europaea HOM05D004484 ORTHO05D005370 1.3e-09 69.3 59 55.9
Cre10.g423800 Chlamydomonas reinhardtii HOM05D004484 ORTHO05D005370 3.8e-09 67.8 549 22.2
arahy.Tifrunner.gnm1.ann1.0F06NC Arachis hypogaea HOM05D004484 ORTHO05D005370 2.4e-08 65.1 46 60.9
unitig_749.g13781 Utricularia gibba HOM05D004484 ORTHO05D005370 3.2e-08 64.7 41 70.7
AagrBONN_evm.TU.Sc2ySwM_368.3370 Anthoceros agrestis HOM05D004484 ORTHO05D005370 9.3e-08 63.2 111 33.3
Hma1.2p1_1470F.1_g285600 Hydrangea macrophylla HOM05D000467 ORTHO05D011800 3.0e-06 58.2 41 70.7


User provided reference genes

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