Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj7A528T57 Lonicera japonica HOM05D004484 ORTHO05D005370 0.0e+00 1397.1 708 100.0
Dinv32377 Davidia involucrata HOM05D004484 ORTHO05D005370 0.0e+00 1103.6 701 80.6
Hma1.2p1_0086F.1_g044870 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 1.4e-309 1065.8 699 78.0
Oeu055487.1 Olea europaea HOM05D004484 ORTHO05D005370 3.4e-300 1034.6 700 75.0
GSVIVG01027610001 Vitis vinifera HOM05D004484 ORTHO05D005370 3.4e-300 1034.6 687 75.5
Cc02_g36700 Coffea canephora HOM05D004484 ORTHO05D005370 8.5e-299 1030.0 695 74.8
ECA234G1700 Erigeron canadensis HOM05D004484 ORTHO05D005370 2.5e-298 1028.5 696 75.4
Nitab4.5_0000457g0330 Nicotiana tabacum HOM05D004484 ORTHO05D005370 9.4e-298 1026.5 695 73.7
TWI23G0227 Tripterygium wilfordii HOM05D004484 ORTHO05D005370 1.4e-296 1022.7 701 73.2
CSS0036976 Camellia sinensis var. sinensis HOM05D004484 ORTHO05D005370 5.1e-296 1020.8 699 75.7
DCAR_015907 Daucus carota HOM05D004484 ORTHO05D005370 6.7e-296 1020.4 697 73.6
CiPaw.01G262000 Carya illinoinensis HOM05D004484 ORTHO05D005370 2.0e-295 1018.8 699 73.2
QL08p052472 Quercus lobata HOM05D004484 ORTHO05D005370 5.7e-295 1017.3 698 74.1
Prupe.2G145600 Prunus persica HOM05D004484 ORTHO05D005370 7.4e-295 1016.9 699 74.0
PGSC0003DMG400012761 Solanum tuberosum HOM05D004484 ORTHO05D005370 1.7e-294 1015.8 694 72.9
Peaxi162Scf00021g01723 Petunia axillaris HOM05D004484 ORTHO05D005370 6.9e-293 1010.4 695 72.5
Eucgr.E01418 Eucalyptus grandis HOM05D004484 ORTHO05D005370 1.5e-292 1009.2 700 72.6
CAN.G388.13 Capsicum annuum HOM05D004484 ORTHO05D005370 2.0e-292 1008.8 694 71.9
Atru.chr5.309 Acer truncatum HOM05D004484 ORTHO05D005370 3.4e-292 1008.1 699 72.2
Nitab4.5_0005372g0070 Nicotiana tabacum HOM05D004484 ORTHO05D005370 7.7e-292 1006.9 715 71.3
MD07G1121000 Malus domestica HOM05D004484 ORTHO05D005370 5.0e-291 1004.2 699 73.2
MSTRG.20748 Avicennia marina HOM05D004484 ORTHO05D005370 6.5e-291 1003.8 702 71.7
TAR629G2468 Trochodendron aralioides HOM05D004484 ORTHO05D005370 8.5e-291 1003.4 679 74.7
Migut.B01635 Erythranthe guttata HOM05D004484 ORTHO05D005370 1.1e-290 1003.0 700 72.9
HanXRQChr16g0520161 Helianthus annuus HOM05D004484 ORTHO05D005370 7.9e-289 996.9 696 72.4
Potri.014G069700 Populus trichocarpa HOM05D004484 ORTHO05D005370 1.4e-288 996.1 699 73.4
SGA_v2.0_scaffold153G37012 Striga asiatica HOM05D004484 ORTHO05D005370 1.1e-287 993.0 700 72.0
ClCG05G002220 Citrullus lanatus HOM05D004484 ORTHO05D005370 2.6e-287 991.9 701 72.5
Lalb_Chr13g0291731 Lupinus albus HOM05D004484 ORTHO05D005370 3.3e-287 991.5 698 71.8
Haze_16815 Corylus avellana HOM05D004484 ORTHO05D005370 9.7e-287 989.9 756 67.7
Sed0020955 Sechium edule HOM05D004484 ORTHO05D005370 9.7e-287 989.9 699 72.1
Solyc01g091350.4 Solanum lycopersicum HOM05D004484 ORTHO05D005370 4.8e-286 987.6 694 71.2
Nn1g01233 Nelumbo nucifera HOM05D004484 ORTHO05D005370 1.4e-285 986.1 695 71.9
Manes.01G265900 Manihot esculenta HOM05D004484 ORTHO05D005370 5.3e-285 984.2 705 70.5
Sc02g0002590 Simmondsia chinensis HOM05D004484 ORTHO05D005370 2.0e-284 982.2 678 73.0
Ca_19886_v3 Cicer arietinum L. HOM05D004484 ORTHO05D005370 5.9e-284 980.7 696 71.0
Sopen01g037090 Solanum pennellii HOM05D004484 ORTHO05D005370 1.3e-283 979.5 694 70.3
Thecc.01G376200 Theobroma cacao HOM05D004484 ORTHO05D005370 1.5e-282 976.1 699 70.1
vmacro13399 Vaccinium macrocarpon HOM05D004484 ORTHO05D005370 5.5e-282 974.2 699 71.5
Aqoxy5G00403 Aquilegia oxysepala HOM05D004484 ORTHO05D005370 7.2e-282 973.8 698 71.5
PSO478G5008 Papaver somniferum HOM05D004484 ORTHO05D005370 9.4e-282 973.4 696 71.3
CsaV3_3G009680 Cucumis sativus L. HOM05D004484 ORTHO05D005370 3.6e-281 971.5 700 70.6
MBI12_g10758_MAGBIO Magnolia biondii HOM05D004484 ORTHO05D005370 4.7e-281 971.1 717 69.2
Medtr4g023560 Medicago truncatula HOM05D004484 ORTHO05D005370 1.0e-280 969.9 696 70.3
Lj3g0013484 Lotus japonicus HOM05D004484 ORTHO05D005370 1.1e-279 966.5 695 70.5
Ca_27059_v3 Cicer arietinum L. HOM05D004484 ORTHO05D005370 1.5e-279 966.1 696 70.1
CANSAT56G4533 Cannabis sativa HOM05D004484 ORTHO05D005370 5.7e-279 964.1 699 70.2
FvH4_7g11900 Fragaria vesca HOM05D004484 ORTHO05D005370 1.1e-277 959.9 699 68.8
Lsat_1_v5_gn_4_43240 Lactuca sativa HOM05D004484 ORTHO05D005370 1.1e-277 959.9 695 71.1
FAN10G1483 Fragaria x ananassa HOM05D004484 ORTHO05D005370 1.8e-277 959.1 699 68.8
arahy.Tifrunner.gnm1.ann1.V1M046 Arachis hypogaea HOM05D004484 ORTHO05D005370 2.4e-277 958.7 696 70.1
arahy.Tifrunner.gnm1.ann1.6K85L9 Arachis hypogaea HOM05D004484 ORTHO05D005370 4.1e-277 958.0 696 70.0
arahy.Tifrunner.gnm1.ann1.HW1IVJ Arachis hypogaea HOM05D004484 ORTHO05D005370 4.1e-277 958.0 696 70.0
FAN06G1787 Fragaria x ananassa HOM05D004484 ORTHO05D005370 5.3e-277 957.6 699 68.7
CANSAT56G1200 Cannabis sativa HOM05D004484 ORTHO05D005370 2.0e-276 955.7 699 69.5
Cpa.g.sc18.115 Carica papaya HOM05D004484 ORTHO05D005370 2.0e-276 955.7 701 68.9
FAN10G2369 Fragaria x ananassa HOM05D004484 ORTHO05D005370 2.0e-276 955.7 699 68.7
FAN06G3319 Fragaria x ananassa HOM05D004484 ORTHO05D005370 2.6e-276 955.3 699 68.4
arahy.Tifrunner.gnm1.ann1.Q9SWB6 Arachis hypogaea HOM05D004484 ORTHO05D005370 3.5e-276 954.9 696 69.5
Psat7g233440 Pisum sativum HOM05D004484 ORTHO05D005370 5.9e-276 954.1 696 69.0
PGR042G0667 Punica granatum HOM05D004484 ORTHO05D005370 1.0e-275 953.4 702 68.9
FAN01G0628 Fragaria x ananassa HOM05D004484 ORTHO05D005370 2.9e-275 951.8 699 68.1
MELO3C006188.2 Cucumis melo HOM05D004484 ORTHO05D005370 8.5e-275 950.3 671 71.8
Ciclev10019016m.g Citrus clementina HOM05D004484 ORTHO05D005370 3.6e-273 944.9 699 69.5
EL10Ac1g00900 Beta vulgaris HOM05D004484 ORTHO05D005370 6.1e-273 944.1 716 65.5
Sabra14G0049400 Salix brachista HOM05D004484 ORTHO05D005370 1.5e-271 939.5 713 69.0
Glyma.05G125700 Glycine max HOM05D004484 ORTHO05D005370 2.6e-271 938.7 698 69.9
Lalb_Chr12g0208261 Lupinus albus HOM05D004484 ORTHO05D005370 9.1e-269 930.2 698 67.8
Phvul.002G205800 Phaseolus vulgaris HOM05D004484 ORTHO05D005370 1.6e-268 929.5 697 68.6
AUR62004221 Chenopodium quinoa HOM05D004484 ORTHO05D005370 5.9e-268 927.5 727 65.6
VMungo0251G1206 Vigna mungo HOM05D004484 ORTHO05D005370 3.0e-264 915.2 698 66.5
Gohir.A11G080700 Gossypium hirsutum HOM05D004484 ORTHO05D005370 2.8e-262 908.7 701 65.6
Gorai.007G091100 Gossypium raimondii HOM05D004484 ORTHO05D005370 3.5e-260 901.7 700 65.3
Gohir.D11G085300 Gossypium hirsutum HOM05D004484 ORTHO05D005370 3.8e-259 898.3 700 65.3
Aqoxy3G02138 Aquilegia oxysepala HOM05D004484 ORTHO05D005370 6.1e-257 891.0 694 65.1
Ah.13g073490 Amaranthus hybridus HOM05D004484 ORTHO05D005370 4.4e-255 884.8 721 63.0
TPR.G9845 Trifolium pratense HOM05D004484 ORTHO05D005370 2.0e-252 875.9 729 63.1
Cfa001721 Carpinus fangiana HOM05D004484 ORTHO05D005370 1.7e-251 872.8 588 74.7
GSVIVG01027609001 Vitis vinifera HOM05D004484 ORTHO05D005370 1.7e-251 872.8 668 66.9
THA.LOC104817247 Tarenaya hassleriana HOM05D004484 ORTHO05D005370 7.3e-250 867.5 699 63.5
FAN03G1897 Fragaria x ananassa HOM05D004484 ORTHO05D005370 4.7e-249 864.8 701 64.2
AUR62013627 Chenopodium quinoa HOM05D004484 ORTHO05D005370 7.8e-244 847.4 716 61.9
Sp1g35020 Schrenkiella parvula HOM05D004484 ORTHO05D005370 8.9e-240 833.9 689 59.4
BraSC267t45947Z Brassica rapa HOM05D004484 ORTHO05D005370 1.5e-239 833.2 699 58.4
C08p05620 Brassica napus HOM05D004484 ORTHO05D005370 2.6e-239 832.4 699 58.9
BcaB04g17469 Brassica carinata HOM05D004484 ORTHO05D005370 7.5e-239 830.9 700 59.0
BolC8t47375H Brassica oleracea HOM05D004484 ORTHO05D005370 9.8e-239 830.5 699 58.8
AT1G48050 Arabidopsis thaliana HOM05D004484 ORTHO05D005370 1.7e-238 829.7 699 59.5
BcaC07g37180 Brassica carinata HOM05D004484 ORTHO05D005370 2.2e-238 829.3 699 58.9
Carub.0001s3716 Capsella rubella HOM05D004484 ORTHO05D005370 3.2e-237 825.5 695 59.0
A08p05330 Brassica napus HOM05D004484 ORTHO05D005370 4.6e-236 821.6 679 59.4
SHI13523 Sapria himalayana HOM05D004484 ORTHO05D005370 2.5e-234 815.8 676 62.6
CARHR037700 Cardamine hirsuta HOM05D004484 ORTHO05D005370 5.6e-234 814.7 695 59.1
Hund27347 Selenicereus undatus HOM05D004484 ORTHO05D005370 7.3e-234 814.3 605 68.1
AL1G54570 Arabidopsis lyrata HOM05D004484 ORTHO05D005370 6.2e-233 811.2 684 58.6
Zm00001eb064930 Zea mays HOM05D004484 ORTHO05D005370 1.3e-219 766.9 687 58.1
COL.COLO4_07018 Corchorus olitorius HOM05D004484 ORTHO05D005370 8.1e-217 757.7 561 67.7
HPP92_027818 Vanilla planifolia HOM05D004484 ORTHO05D005370 4.4e-215 751.9 695 57.1
arahy.Tifrunner.gnm1.ann1.03ZR4A Arachis hypogaea HOM05D004484 ORTHO05D005370 9.9e-207 724.2 715 56.8
arahy.Tifrunner.gnm1.ann1.5WGS6V Arachis hypogaea HOM05D004484 ORTHO05D005370 1.3e-206 723.8 672 59.4
Potri.002G148200 Populus trichocarpa HOM05D004484 ORTHO05D005370 5.5e-205 718.4 493 74.2
unitig_749.g13780 Utricularia gibba HOM05D004484 ORTHO05D005370 1.8e-203 713.4 572 64.3
Hma1.2p1_0086F.1_g044880 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 4.3e-202 708.8 459 79.1
Lj9C569T11 Lonicera japonica HOM05D004484 ORTHO05D005370 3.4e-199 699.1 476 73.7
COL.COLO4_12548 Corchorus olitorius HOM05D004484 ORTHO05D005370 7.6e-199 698.0 720 52.8
arahy.Tifrunner.gnm1.ann1.5492A7 Arachis hypogaea HOM05D004484 ORTHO05D005370 1.1e-194 684.1 691 56.0
arahy.Tifrunner.gnm1.ann1.T9R8PC Arachis hypogaea HOM05D004484 ORTHO05D005370 3.2e-189 666.0 690 54.8
Aa31LG10G5650 Aethionema arabicum HOM05D004484 ORTHO05D005370 6.9e-184 648.3 589 56.7
Pp3c22_11100 Physcomitrium patens HOM05D004484 ORTHO05D005370 9.4e-181 637.9 697 48.5
Thhalv10011351m.g Eutrema salsugineum HOM05D004484 ORTHO05D005370 1.4e-179 634.0 662 51.5
ATR0049G077 Amborella trichopoda HOM05D004484 ORTHO05D005370 6.7e-179 631.7 469 65.5
CDE04G3156 Ceratophyllum demersum HOM05D004484 ORTHO05D005370 2.0e-178 630.2 687 50.2
SMO367G0514 Selaginella moellendorffii HOM05D004484 ORTHO05D005370 6.1e-172 608.6 701 47.2
Mapoly0129s0012 Marchantia polymorpha HOM05D004484 ORTHO05D005370 1.1e-165 587.8 654 48.0
PGR119G1536 Punica granatum HOM05D004484 ORTHO05D005370 1.6e-164 583.9 523 57.6
RcHm_v2.0_Chr1g0350581 Rosa chinensis HOM05D004484 ORTHO05D005370 7.0e-160 568.5 388 72.2
AagrBONN_evm.TU.Sc2ySwM_368.3373 Anthoceros agrestis HOM05D004484 ORTHO05D005370 6.5e-150 535.4 696 42.2
CBR_g30081 Chara braunii HOM05D004484 ORTHO05D005370 7.3e-109 399.1 553 40.0
RcHm_v2.0_Chr1g0350571 Rosa chinensis HOM05D004484 ORTHO05D005370 4.7e-108 396.4 300 68.3
SHI38996 Sapria himalayana HOM05D004484 ORTHO05D005370 3.2e-88 330.5 204 77.5
Hma1.2p1_0701F.1_g205850 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 1.1e-83 315.5 276 62.3
SHI38095 Sapria himalayana HOM05D004484 ORTHO05D005370 1.8e-78 298.1 190 75.3
SHI38094 Sapria himalayana HOM05D004484 ORTHO05D005370 2.9e-65 254.2 219 59.8
arahy.Tifrunner.gnm1.ann1.47H85H Arachis hypogaea HOM05D004484 ORTHO05D005370 4.2e-64 250.4 340 45.3
Glyma.06G243967 Glycine max HOM05D004484 ORTHO05D005370 6.5e-57 226.5 144 73.6
Glyma.01G142851 Glycine max HOM05D004484 ORTHO05D005370 1.5e-53 215.3 164 66.5
SEGI_20047 Sequoiadendron giganteum HOM05D004484 ORTHO05D005370 4.0e-46 190.7 229 46.7
Hma1.2p1_0170F.1_g075250 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 2.6e-45 188.0 202 54.5
Carub.0004s0917 Capsella rubella HOM05D004484 ORTHO05D005370 3.3e-45 187.6 253 45.1
Glyma.17G005802 Glycine max HOM05D004484 ORTHO05D005370 2.0e-42 178.3 195 54.9
MCO15G158 Micromonas commoda HOM05D004484 ORTHO05D005370 2.7e-39 167.9 515 28.2
CAN.G594.7 Capsicum annuum HOM05D004484 ORTHO05D005370 5.2e-38 163.7 105 73.3
SHI38995 Sapria himalayana HOM05D004484 ORTHO05D005370 3.4e-37 161.0 134 62.7
SEGI_29754 Sequoiadendron giganteum HOM05D004484 ORTHO05D005370 1.3e-36 159.1 116 66.4
TPR.G22633 Trifolium pratense HOM05D004484 ORTHO05D005370 2.8e-36 157.9 92 80.4
QL08p052505 Quercus lobata HOM05D004484 ORTHO05D005370 1.7e-33 148.7 183 49.7
CAN.G205.22 Capsicum annuum HOM05D004484 ORTHO05D005370 6.5e-33 146.7 96 70.8
SGA_v2.0_scaffold65G22170 Striga asiatica HOM05D004484 ORTHO05D005370 4.7e-31 140.6 201 41.8
Eucgr.I00725 Eucalyptus grandis HOM05D004484 ORTHO05D005370 1.7e-28 132.1 82 74.4
Aa31LG10G5660 Aethionema arabicum HOM05D004484 ORTHO05D005370 1.8e-27 128.6 95 62.1
Os03g0856200 Oryza sativa ssp. japonica HOM05D004484 ORTHO05D005370 1.2e-26 125.9 92 65.2
Solyc01g091430.2 Solanum lycopersicum HOM05D004484 ORTHO05D005370 3.5e-26 124.4 99 67.7
CAN.G388.14 Capsicum annuum HOM05D004484 ORTHO05D005370 2.9e-25 121.3 76 71.1
CAN.G279.6 Capsicum annuum HOM05D004484 ORTHO05D005370 2.3e-22 111.7 72 72.2
PRCOL_00002704 Prasinoderma coloniale HOM05D004484 ORTHO05D005370 4.1e-19 100.9 503 24.7
SGA_v2.0_scaffold10G05342 Striga asiatica HOM05D004484 ORTHO05D005370 1.3e-17 95.9 191 35.1
SGA_v2.0_scaffold172G39032 Striga asiatica HOM05D004484 ORTHO05D005370 3.9e-17 94.4 216 34.7
Glyma.06G243934 Glycine max HOM05D004484 ORTHO05D005370 5.0e-17 94.0 81 56.8
Glyma.06G244302 Glycine max HOM05D004484 ORTHO05D005370 1.5e-16 92.4 81 55.6
Solyc01g091440.4 Solanum lycopersicum HOM05D004484 ORTHO05D005370 1.5e-16 92.4 133 42.9
SGA_v2.0_scaffold29G12247 Striga asiatica HOM05D004484 ORTHO05D005370 4.3e-16 90.9 186 36.6
TPR.G9848 Trifolium pratense HOM05D000164 ORTHO05D000096 6.8e-14 83.6 55 67.3
Eucgr.E01421 Eucalyptus grandis HOM05D004484 ORTHO05D005370 7.5e-13 80.1 66 60.6
Eucgr.L02075 Eucalyptus grandis HOM05D004484 ORTHO05D005370 2.9e-12 78.2 66 59.1
arahy.Tifrunner.gnm1.ann1.0F06NC Arachis hypogaea HOM05D004484 ORTHO05D005370 8.3e-12 76.6 48 72.9
CAN.G321.48 Capsicum annuum HOM05D001267 ORTHO05D002376 4.1e-11 74.3 80 50.0
Cre10.g423800 Chlamydomonas reinhardtii HOM05D004484 ORTHO05D005370 4.6e-10 70.9 546 21.4
unitig_749.g13781 Utricularia gibba HOM05D004484 ORTHO05D005370 5.6e-08 63.9 43 67.4
Hma1.2p1_1470F.1_g285600 Hydrangea macrophylla HOM05D000467 ORTHO05D011800 7.3e-08 63.5 48 66.7
Oeu032522.1 Olea europaea HOM05D004484 ORTHO05D005370 2.1e-07 62.0 47 61.7


User provided reference genes

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