Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01012364001 Vitis vinifera HOM05D002640 ORTHO05D003231 2.7e-85 318.5 150 100.0
GSVIVG01012377001 Vitis vinifera HOM05D002640 ORTHO05D003231 2.2e-79 298.9 150 94.0
GSVIVG01012381001 Vitis vinifera HOM05D002640 ORTHO05D003231 2.9e-79 298.5 146 95.2
PSO384G3455 Papaver somniferum HOM05D002640 ORTHO05D003231 3.8e-55 218.4 149 71.1
PSO339G4261 Papaver somniferum HOM05D002640 ORTHO05D003231 4.9e-55 218.0 149 71.1
Nn7g37023 Nelumbo nucifera HOM05D002640 ORTHO05D003231 4.1e-54 214.9 154 67.5
Dinv10811 Davidia involucrata HOM05D002640 ORTHO05D003231 2.7e-53 212.2 147 69.4
TWI53G2001 Tripterygium wilfordii HOM05D002640 ORTHO05D003231 2.7e-53 212.2 146 69.2
Eucgr.K01682 Eucalyptus grandis HOM05D002640 ORTHO05D003231 3.5e-53 211.8 150 69.3
Prupe.7G019900 Prunus persica HOM05D002640 ORTHO05D003231 3.5e-53 211.8 144 70.8
TWI77G0284 Tripterygium wilfordii HOM05D002640 ORTHO05D003231 6.0e-53 211.1 146 69.9
Duzib106G1211 Durio zibethinus HOM05D002640 ORTHO05D003231 7.8e-53 210.7 150 69.3
Thecc.10G133700 Theobroma cacao HOM05D002640 ORTHO05D003231 7.8e-53 210.7 150 70.0
arahy.Tifrunner.gnm1.ann1.PY7FNU Arachis hypogaea HOM05D002640 ORTHO05D003231 1.7e-52 209.5 150 68.7
arahy.Tifrunner.gnm1.ann1.FM1LAN Arachis hypogaea HOM05D002640 ORTHO05D003231 2.3e-52 209.1 150 68.7
MSTRG.6300 Avicennia marina HOM05D002640 ORTHO05D003231 2.3e-52 209.1 154 68.2
RcHm_v2.0_Chr3g0494601 Rosa chinensis HOM05D002640 ORTHO05D003231 3.0e-52 208.8 148 68.2
FAN26G3239 Fragaria x ananassa HOM05D002640 ORTHO05D003231 5.1e-52 208.0 150 68.7
Manes.08G162401 Manihot esculenta HOM05D002640 ORTHO05D003231 5.1e-52 208.0 150 68.7
FAN28G1238 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.5e-51 206.5 150 68.0
vmacro08975 Vaccinium macrocarpon HOM05D002640 ORTHO05D003231 1.5e-51 206.5 146 69.2
Actinidia37853 Actinidia chinensis HOM05D002640 ORTHO05D003231 1.9e-51 206.1 154 67.5
Glyma.03G121000 Glycine max HOM05D002640 ORTHO05D003231 1.9e-51 206.1 152 66.4
FvH4_1g29220 Fragaria vesca HOM05D002640 ORTHO05D003231 2.5e-51 205.7 150 68.0
Lj1g0022797 Lotus japonicus HOM05D002640 ORTHO05D003231 3.3e-51 205.3 150 66.7
ClCG11G010450 Citrullus lanatus HOM05D002640 ORTHO05D003231 4.3e-51 204.9 156 66.7
MBI11_g01739_MAGBIO Magnolia biondii HOM05D002640 ORTHO05D003231 4.3e-51 204.9 154 66.9
MELO3C008653.2 Cucumis melo HOM05D002640 ORTHO05D003231 5.6e-51 204.5 156 66.0
MD00G1108000 Malus domestica HOM05D002640 ORTHO05D003231 5.6e-51 204.5 150 67.3
FAN23G1939 Fragaria x ananassa HOM05D002640 ORTHO05D003231 7.3e-51 204.1 150 68.0
Duzib114G0695 Durio zibethinus HOM05D002640 ORTHO05D003231 9.6e-51 203.8 150 66.7
Gohir.D10G199500 Gossypium hirsutum HOM05D002640 ORTHO05D003231 9.6e-51 203.8 150 67.3
Gorai.011G223600 Gossypium raimondii HOM05D002640 ORTHO05D003231 9.6e-51 203.8 150 67.3
CsaV3_2G009910 Cucumis sativus L. HOM05D002640 ORTHO05D003231 1.2e-50 203.4 156 65.4
Sp5g20200 Schrenkiella parvula HOM05D002640 ORTHO05D003231 1.2e-50 203.4 132 74.2
Gohir.A06G172600 Gossypium hirsutum HOM05D002640 ORTHO05D003231 1.6e-50 203.0 144 68.8
MD00G1025500 Malus domestica HOM05D002640 ORTHO05D003231 1.6e-50 203.0 150 66.7
TPR.G26612 Trifolium pratense HOM05D002640 ORTHO05D003231 1.6e-50 203.0 150 66.7
CARHR057100 Cardamine hirsuta HOM05D002640 ORTHO05D003231 2.1e-50 202.6 138 73.2
Gohir.A10G191700 Gossypium hirsutum HOM05D002640 ORTHO05D003231 2.1e-50 202.6 150 67.3
Lj2C412G3 Lonicera japonica HOM05D002640 ORTHO05D003231 2.1e-50 202.6 147 64.6
Medtr7g088700 Medicago truncatula HOM05D002640 ORTHO05D003231 2.1e-50 202.6 150 66.7
Oeu044234.2 Olea europaea HOM05D002640 ORTHO05D003231 2.1e-50 202.6 148 68.9
Cpa.g.sc1617.1 Carica papaya HOM05D002640 ORTHO05D003231 3.6e-50 201.8 150 67.3
Gohir.D06G181500 Gossypium hirsutum HOM05D002640 ORTHO05D003231 3.6e-50 201.8 144 68.8
Gorai.010G212900 Gossypium raimondii HOM05D002640 ORTHO05D003231 3.6e-50 201.8 144 68.8
unitig_21.g20682 Utricularia gibba HOM05D002640 ORTHO05D003231 4.7e-50 201.4 141 68.1
Oeu022996.1 Olea europaea HOM05D002640 ORTHO05D003231 6.2e-50 201.1 142 67.6
CDE09G0935 Ceratophyllum demersum HOM05D002640 ORTHO05D003231 8.1e-50 200.7 150 66.0
Ca_08696_v3 Cicer arietinum L. HOM05D002640 ORTHO05D003231 8.1e-50 200.7 150 64.7
FAN19G2288 Fragaria x ananassa HOM05D002640 ORTHO05D003231 8.1e-50 200.7 150 67.3
Atru.chr1.1380 Acer truncatum HOM05D002640 ORTHO05D003231 1.1e-49 200.3 155 65.8
Potri.006G031900 Populus trichocarpa HOM05D002640 ORTHO05D003231 1.1e-49 200.3 144 70.1
Potri.016G029200 Populus trichocarpa HOM05D002640 ORTHO05D003231 1.1e-49 200.3 144 69.4
Phvul.001G117200 Phaseolus vulgaris HOM05D002640 ORTHO05D003231 1.4e-49 199.9 150 66.7
Actinidia38202 Actinidia chinensis HOM05D002640 ORTHO05D003231 3.1e-49 198.7 137 68.6
DCAR_020604 Daucus carota HOM05D002640 ORTHO05D003231 4.0e-49 198.4 147 66.7
Glyma.19G125600 Glycine max HOM05D002640 ORTHO05D003231 4.0e-49 198.4 151 62.3
CANSAT64G1505 Cannabis sativa HOM05D002640 ORTHO05D003231 5.2e-49 198.0 150 64.7
Carub.0002s1117 Capsella rubella HOM05D002640 ORTHO05D003231 5.2e-49 198.0 131 73.3
Ciclev10013566m.g Citrus clementina HOM05D002640 ORTHO05D003231 5.2e-49 198.0 149 65.8
VMungo1383G1765 Vigna mungo HOM05D002640 ORTHO05D003231 9.0e-49 197.2 150 66.7
CDE08G1380 Ceratophyllum demersum HOM05D002640 ORTHO05D003231 1.2e-48 196.8 150 65.3
Sabra16G0033200 Salix brachista HOM05D002640 ORTHO05D003231 1.2e-48 196.8 144 68.1
GSVIVG01025815001 Vitis vinifera HOM05D002640 ORTHO05D003231 1.2e-48 196.8 151 64.9
Aqoxy1G00051 Aquilegia oxysepala HOM05D002640 ORTHO05D003231 1.5e-48 196.4 144 65.3
CiPaw.09G052100 Carya illinoinensis HOM05D002640 ORTHO05D003231 1.5e-48 196.4 150 65.3
Sabra06G0021300 Salix brachista HOM05D002640 ORTHO05D003231 1.5e-48 196.4 144 68.8
ATR0782G064 Amborella trichopoda HOM05D002640 ORTHO05D003231 2.0e-48 196.1 145 66.2
AL2G22130 Arabidopsis lyrata HOM05D002640 ORTHO05D003231 2.0e-48 196.1 132 70.5
AT1G65440 Arabidopsis thaliana HOM05D002640 ORTHO05D003231 2.0e-48 196.1 131 72.5
BcaB05g24114 Brassica carinata HOM05D002640 ORTHO05D003231 2.6e-48 195.7 144 68.1
COL.COLO4_10242 Corchorus olitorius HOM05D002640 ORTHO05D003231 2.6e-48 195.7 148 64.9
Thhalv10018001m.g Eutrema salsugineum HOM05D002640 ORTHO05D003231 2.6e-48 195.7 138 70.3
Prupe.8G211800 Prunus persica HOM05D002640 ORTHO05D003231 2.6e-48 195.7 136 69.1
Rhsim04G0118000 Rhododendron simsii HOM05D002640 ORTHO05D003231 2.6e-48 195.7 148 64.9
Migut.J01553 Erythranthe guttata HOM05D002640 ORTHO05D003231 4.4e-48 194.9 150 65.3
BcaNung05532 Brassica carinata HOM05D002640 ORTHO05D003231 5.8e-48 194.5 145 66.9
CSS0028254 Camellia sinensis var. sinensis HOM05D002640 ORTHO05D003231 5.8e-48 194.5 153 63.4
Haze_20287 Corylus avellana HOM05D002640 ORTHO05D003231 7.6e-48 194.1 150 64.0
TAR623G0852 Trochodendron aralioides HOM05D002640 ORTHO05D003231 7.6e-48 194.1 153 64.1
AUR62018416 Chenopodium quinoa HOM05D002640 ORTHO05D003231 9.9e-48 193.7 142 68.3
SalBow6G2030 Salvia bowleyana HOM05D002640 ORTHO05D003231 1.3e-47 193.4 154 65.6
Sed0027584 Sechium edule HOM05D002640 ORTHO05D003231 1.3e-47 193.4 150 64.7
Ah.04g150530 Amaranthus hybridus HOM05D002640 ORTHO05D003231 2.2e-47 192.6 140 70.7
THA.LOC104805690 Tarenaya hassleriana HOM05D002640 ORTHO05D003231 2.2e-47 192.6 148 66.2
Aa31LG2G2460 Aethionema arabicum HOM05D002640 ORTHO05D003231 2.9e-47 192.2 147 64.6
C06p39050 Brassica napus HOM05D002640 ORTHO05D003231 2.9e-47 192.2 149 66.4
BolC6t38997H Brassica oleracea HOM05D002640 ORTHO05D003231 2.9e-47 192.2 149 66.4
Cc06_g21410 Coffea canephora HOM05D002640 ORTHO05D003231 2.9e-47 192.2 150 62.7
QL07p013828 Quercus lobata HOM05D002640 ORTHO05D003231 2.9e-47 192.2 150 63.3
BraA07t30909Z Brassica rapa HOM05D002640 ORTHO05D003231 3.8e-47 191.8 119 74.8
Lalb_Chr24g0400581 Lupinus albus HOM05D002640 ORTHO05D003231 3.8e-47 191.8 150 64.7
Zm00001eb291590 Zea mays HOM05D002640 ORTHO05D003231 3.8e-47 191.8 146 64.4
A07p32820 Brassica napus HOM05D002640 ORTHO05D003231 4.9e-47 191.4 149 66.4
Solyc10g081020.2 Solanum lycopersicum HOM05D002640 ORTHO05D003231 4.9e-47 191.4 148 64.9
EL10Ac3g07304 Beta vulgaris HOM05D002640 ORTHO05D003231 6.4e-47 191.0 146 67.1
MBI13_g02373_MAGBIO Magnolia biondii HOM05D002640 ORTHO05D003231 1.1e-46 190.3 113 77.9
Nitab4.5_0000062g0270 Nicotiana tabacum HOM05D002640 ORTHO05D003231 1.1e-46 190.3 127 72.4
Nitab4.5_0003225g0040 Nicotiana tabacum HOM05D002640 ORTHO05D003231 1.4e-46 189.9 119 75.6
Hund19066 Selenicereus undatus HOM05D002640 ORTHO05D003231 1.4e-46 189.9 150 64.7
PGR142G0829 Punica granatum HOM05D002640 ORTHO05D003231 3.2e-46 188.7 113 76.1
C02p17460 Brassica napus HOM05D002640 ORTHO05D003231 5.4e-46 188.0 143 66.4
BolC2t07860H Brassica oleracea HOM05D002640 ORTHO05D003231 5.4e-46 188.0 143 66.4
A02p13220 Brassica napus HOM05D002640 ORTHO05D003231 7.1e-46 187.6 146 65.8
BraA02t06378Z Brassica rapa HOM05D002640 ORTHO05D003231 7.1e-46 187.6 146 65.8
Peaxi162Scf00601g00007 Petunia axillaris HOM05D002640 ORTHO05D003231 1.6e-45 186.4 123 72.4
SGA_v2.0_scaffold66G22308 Striga asiatica HOM05D002640 ORTHO05D003231 1.6e-45 186.4 120 75.0
Sopen10g031530 Solanum pennellii HOM05D002640 ORTHO05D003231 2.1e-45 186.0 122 72.1
PGSC0003DMG400028197 Solanum tuberosum HOM05D002640 ORTHO05D003231 7.8e-45 184.1 122 71.3
CAN.G128.94 Capsicum annuum HOM05D002640 ORTHO05D003231 1.0e-44 183.7 113 75.2
HPP92_011291 Vanilla planifolia HOM05D002640 ORTHO05D003231 3.9e-44 181.8 148 63.5
Os05g0494900 Oryza sativa ssp. japonica HOM05D002640 ORTHO05D003231 5.1e-44 181.4 146 61.6
Lalb_Chr14g0365421 Lupinus albus HOM05D002640 ORTHO05D003231 6.6e-44 181.0 149 60.4
HanXRQChr06g0177131 Helianthus annuus HOM05D002640 ORTHO05D003231 8.7e-44 180.6 144 62.5
AUR62041298 Chenopodium quinoa HOM05D002640 ORTHO05D003231 1.9e-43 179.5 144 63.9
Lsat_1_v5_gn_8_83860 Lactuca sativa HOM05D002640 ORTHO05D003231 8.1e-42 174.1 145 62.1
HanXRQChr04g0125591 Helianthus annuus HOM05D002640 ORTHO05D003231 3.1e-41 172.2 127 66.9
Lj9C650G10 Lonicera japonica HOM05D002640 ORTHO05D003231 3.1e-41 172.2 119 66.4
MD10G1173400 Malus domestica HOM05D002640 ORTHO05D003231 3.1e-41 172.2 150 58.7
ECA236G4010 Erigeron canadensis HOM05D002640 ORTHO05D003231 1.5e-40 169.9 119 68.9
QL04p022161 Quercus lobata HOM05D002640 ORTHO05D003231 7.6e-40 167.5 152 57.2
DCAR_013529 Daucus carota HOM05D002640 ORTHO05D003231 1.7e-39 166.4 147 55.8
SEGI_20723 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 1.7e-39 166.4 158 52.5
Migut.J01544 Erythranthe guttata HOM05D002640 ORTHO05D003231 3.2e-38 162.2 114 65.8
SEGI_00617 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 3.2e-38 162.2 160 52.5
Potri.001G034300 Populus trichocarpa HOM05D002640 ORTHO05D003231 3.5e-37 158.7 146 55.5
HPP92_011270 Vanilla planifolia HOM05D002640 ORTHO05D003231 1.0e-36 157.1 103 70.9
Lj1C1081G2 Lonicera japonica HOM05D002640 ORTHO05D003231 1.3e-36 156.8 138 55.1
QL04p022175 Quercus lobata HOM05D002640 ORTHO05D003231 9.6e-35 150.6 140 53.6
QL07p013799 Quercus lobata HOM05D002640 ORTHO05D003231 2.1e-34 149.4 107 63.6
ECA247G4078 Erigeron canadensis HOM05D002640 ORTHO05D003231 1.1e-33 147.1 90 70.0
AagrBONN_evm.TU.Sc2ySwM_228.4939 Anthoceros agrestis HOM05D002640 ORTHO05D003231 1.4e-33 146.7 134 54.5
HanXRQChr10g0298481 Helianthus annuus HOM05D002640 ORTHO05D003231 1.8e-33 146.4 90 72.2
Pp3c5_23930 Physcomitrium patens HOM05D002640 ORTHO05D003231 2.4e-33 146.0 184 47.3
SEGI_15393 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 4.0e-33 145.2 164 47.0
COL.COLO4_25705 Corchorus olitorius HOM05D002640 ORTHO05D003231 1.2e-32 143.7 87 71.3
Lsat_1_v5_gn_9_32200 Lactuca sativa HOM05D002640 ORTHO05D003231 2.6e-32 142.5 139 51.1
SMO364G0195 Selaginella moellendorffii HOM05D002640 ORTHO05D003231 2.6e-32 142.5 126 54.8
AL2G12170 Arabidopsis lyrata HOM05D002640 ORTHO05D003231 3.4e-32 142.1 89 68.5
Carub.0002s0163 Capsella rubella HOM05D002640 ORTHO05D003231 9.9e-32 140.6 90 66.7
AT1G63210 Arabidopsis thaliana HOM05D002640 ORTHO05D003231 3.8e-31 138.7 89 67.4
Medtr7g087475 Medicago truncatula HOM05D002640 ORTHO05D003231 5.5e-30 134.8 86 68.6
Thecc.10G136200 Theobroma cacao HOM05D002640 ORTHO05D003231 5.5e-30 134.8 147 49.0
VMungo1080G1740 Vigna mungo HOM05D002640 ORTHO05D003231 7.1e-30 134.4 145 47.6
Lalb_Chr15g0079261 Lupinus albus HOM05D002640 ORTHO05D003231 9.3e-30 134.0 89 62.9
COL.COLO4_04288 Corchorus olitorius HOM05D002640 ORTHO05D003231 2.7e-29 132.5 149 46.3
Mapoly0025s0106 Marchantia polymorpha HOM05D002640 ORTHO05D003231 2.7e-29 132.5 139 51.8
Ca_12390_v3 Cicer arietinum L. HOM05D002640 ORTHO05D003231 3.5e-29 132.1 89 61.8
Thhalv10012314m.g Eutrema salsugineum HOM05D002640 ORTHO05D003231 3.5e-29 132.1 145 49.0
Psat5g224720 Pisum sativum HOM05D002640 ORTHO05D003231 3.5e-29 132.1 89 62.9
Phvul.005G013600 Phaseolus vulgaris HOM05D002640 ORTHO05D003231 6.0e-29 131.3 145 46.9
CBR_g879 Chara braunii HOM05D002640 ORTHO05D003231 2.3e-28 129.4 151 47.0
TPR.G30407 Trifolium pratense HOM05D002640 ORTHO05D003231 2.3e-28 129.4 89 59.6
Glyma.06G312200 Glycine max HOM05D002640 ORTHO05D003231 3.0e-28 129.0 149 45.6
Gohir.A05G396600 Gossypium hirsutum HOM05D002640 ORTHO05D003231 3.0e-28 129.0 140 49.3
Lj3g0013532 Lotus japonicus HOM05D002640 ORTHO05D003231 8.7e-28 127.5 89 58.4
Sp2g01330 Schrenkiella parvula HOM05D002640 ORTHO05D003231 2.5e-27 125.9 89 61.8
CBR_g876 Chara braunii HOM05D002640 ORTHO05D003231 4.3e-27 125.2 130 49.2
Pp3c5_24480 Physcomitrium patens HOM05D002640 ORTHO05D003231 4.3e-27 125.2 100 53.0
SHI11341 Sapria himalayana HOM05D002640 ORTHO05D003231 9.6e-27 124.0 124 51.6
Carub.0001s4195 Capsella rubella HOM05D002640 ORTHO05D003231 2.8e-26 122.5 89 62.9
ECA236G0767 Erigeron canadensis HOM05D002640 ORTHO05D003231 6.0e-21 104.8 97 55.7
Psat0s699g0080 Pisum sativum HOM05D002640 ORTHO05D003231 7.2e-14 81.3 78 57.7
BcaC03g14705 Brassica carinata HOM05D002640 ORTHO05D003231 1.2e-13 80.5 51 74.5
C02p21400 Brassica napus HOM05D002640 ORTHO05D003231 1.2e-13 80.5 51 74.5
BolC2t08277H Brassica oleracea HOM05D002640 ORTHO05D003231 1.2e-13 80.5 51 74.5
MCO05G283 Micromonas commoda HOM05D002640 ORTHO05D003231 6.1e-13 78.2 96 40.6
Manes.04G154475 Manihot esculenta HOM05D002640 ORTHO05D003231 5.1e-12 75.1 44 68.2
PRCOL_00004004 Prasinoderma coloniale HOM05D002640 ORTHO05D003231 9.4e-06 54.3 100 33.0


User provided reference genes

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