Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_015907 Daucus carota HOM05D004484 ORTHO05D005370 0.0e+00 1352.0 690 100.0
Dinv32377 Davidia involucrata HOM05D004484 ORTHO05D005370 1.1e-303 1046.2 689 74.9
Lj7A528T57 Lonicera japonica HOM05D004484 ORTHO05D005370 1.9e-295 1018.8 697 73.6
Cc02_g36700 Coffea canephora HOM05D004484 ORTHO05D005370 4.4e-292 1007.7 688 71.8
Hma1.2p1_0086F.1_g044870 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 5.9e-289 997.3 684 72.8
Oeu055487.1 Olea europaea HOM05D004484 ORTHO05D005370 1.1e-287 993.0 689 71.0
Nitab4.5_0000457g0330 Nicotiana tabacum HOM05D004484 ORTHO05D005370 2.5e-287 991.9 687 70.6
Prupe.2G145600 Prunus persica HOM05D004484 ORTHO05D005370 9.5e-287 989.9 689 71.6
QL08p052472 Quercus lobata HOM05D004484 ORTHO05D005370 1.2e-286 989.6 689 72.0
ECA234G1700 Erigeron canadensis HOM05D004484 ORTHO05D005370 3.6e-286 988.0 689 70.2
TWI23G0227 Tripterygium wilfordii HOM05D004484 ORTHO05D005370 1.1e-282 976.5 687 70.6
PSO478G5008 Papaver somniferum HOM05D004484 ORTHO05D005370 1.6e-281 972.6 690 70.6
GSVIVG01027610001 Vitis vinifera HOM05D004484 ORTHO05D005370 3.5e-281 971.5 672 71.3
CiPaw.01G262000 Carya illinoinensis HOM05D004484 ORTHO05D005370 4.5e-281 971.1 689 69.1
Eucgr.E01418 Eucalyptus grandis HOM05D004484 ORTHO05D005370 8.6e-280 966.8 689 69.2
Peaxi162Scf00021g01723 Petunia axillaris HOM05D004484 ORTHO05D005370 8.6e-280 966.8 687 69.0
Haze_16815 Corylus avellana HOM05D004484 ORTHO05D005370 1.9e-279 965.7 746 65.8
PGSC0003DMG400012761 Solanum tuberosum HOM05D004484 ORTHO05D005370 1.9e-279 965.7 687 68.9
TAR629G2468 Trochodendron aralioides HOM05D004484 ORTHO05D005370 2.5e-279 965.3 668 71.6
Migut.B01635 Erythranthe guttata HOM05D004484 ORTHO05D005370 7.3e-279 963.8 689 70.1
SGA_v2.0_scaffold153G37012 Striga asiatica HOM05D004484 ORTHO05D005370 2.8e-278 961.8 687 69.9
CAN.G388.13 Capsicum annuum HOM05D004484 ORTHO05D005370 3.6e-278 961.4 683 68.7
Potri.014G069700 Populus trichocarpa HOM05D004484 ORTHO05D005370 4.7e-278 961.1 689 70.4
MD07G1121000 Malus domestica HOM05D004484 ORTHO05D005370 6.1e-278 960.7 689 69.8
HanXRQChr16g0520161 Helianthus annuus HOM05D004484 ORTHO05D005370 8.0e-278 960.3 688 68.9
MSTRG.20748 Avicennia marina HOM05D004484 ORTHO05D005370 1.4e-277 959.5 685 68.8
CSS0036976 Camellia sinensis var. sinensis HOM05D004484 ORTHO05D005370 6.8e-277 957.2 695 70.4
Atru.chr5.309 Acer truncatum HOM05D004484 ORTHO05D005370 8.9e-277 956.8 685 69.3
Ca_19886_v3 Cicer arietinum L. HOM05D004484 ORTHO05D005370 9.8e-276 953.4 689 68.2
Nn1g01233 Nelumbo nucifera HOM05D004484 ORTHO05D005370 1.7e-275 952.6 687 68.4
Sed0020955 Sechium edule HOM05D004484 ORTHO05D005370 3.7e-275 951.4 689 68.1
Nitab4.5_0005372g0070 Nicotiana tabacum HOM05D004484 ORTHO05D005370 6.4e-275 950.7 697 67.9
Manes.01G265900 Manihot esculenta HOM05D004484 ORTHO05D005370 4.1e-274 948.0 688 68.8
Solyc01g091350.4 Solanum lycopersicum HOM05D004484 ORTHO05D005370 4.1e-274 948.0 687 67.4
Thecc.01G376200 Theobroma cacao HOM05D004484 ORTHO05D005370 4.1e-274 948.0 689 68.5
Lsat_1_v5_gn_4_43240 Lactuca sativa HOM05D004484 ORTHO05D005370 2.7e-273 945.3 687 68.9
Lalb_Chr13g0291731 Lupinus albus HOM05D004484 ORTHO05D005370 1.3e-272 943.0 689 68.5
Sc02g0002590 Simmondsia chinensis HOM05D004484 ORTHO05D005370 1.7e-272 942.6 670 68.8
Sopen01g037090 Solanum pennellii HOM05D004484 ORTHO05D005370 3.0e-272 941.8 687 67.0
Aqoxy5G00403 Aquilegia oxysepala HOM05D004484 ORTHO05D005370 1.1e-271 939.9 687 68.7
Lj3g0013484 Lotus japonicus HOM05D004484 ORTHO05D005370 1.1e-271 939.9 687 68.9
ClCG05G002220 Citrullus lanatus HOM05D004484 ORTHO05D005370 1.5e-271 939.5 689 68.1
Medtr4g023560 Medicago truncatula HOM05D004484 ORTHO05D005370 5.6e-271 937.6 689 67.5
Ca_27059_v3 Cicer arietinum L. HOM05D004484 ORTHO05D005370 7.3e-271 937.2 689 67.6
Ciclev10019016m.g Citrus clementina HOM05D004484 ORTHO05D005370 1.4e-269 932.9 689 68.2
Psat7g233440 Pisum sativum HOM05D004484 ORTHO05D005370 2.3e-269 932.2 689 66.8
vmacro13399 Vaccinium macrocarpon HOM05D004484 ORTHO05D005370 4.0e-269 931.4 689 68.1
CsaV3_3G009680 Cucumis sativus L. HOM05D004484 ORTHO05D005370 5.2e-269 931.0 689 66.8
FvH4_7g11900 Fragaria vesca HOM05D004484 ORTHO05D005370 3.4e-268 928.3 689 67.1
Cpa.g.sc18.115 Carica papaya HOM05D004484 ORTHO05D005370 4.4e-268 927.9 687 67.5
CANSAT56G4533 Cannabis sativa HOM05D004484 ORTHO05D005370 7.5e-268 927.2 687 68.1
arahy.Tifrunner.gnm1.ann1.6K85L9 Arachis hypogaea HOM05D004484 ORTHO05D005370 1.1e-266 923.3 689 68.1
arahy.Tifrunner.gnm1.ann1.HW1IVJ Arachis hypogaea HOM05D004484 ORTHO05D005370 1.1e-266 923.3 689 68.1
arahy.Tifrunner.gnm1.ann1.V1M046 Arachis hypogaea HOM05D004484 ORTHO05D005370 1.1e-266 923.3 689 67.9
CANSAT56G1200 Cannabis sativa HOM05D004484 ORTHO05D005370 1.1e-266 923.3 687 67.8
MBI12_g10758_MAGBIO Magnolia biondii HOM05D004484 ORTHO05D005370 7.0e-266 920.6 717 64.7
arahy.Tifrunner.gnm1.ann1.Q9SWB6 Arachis hypogaea HOM05D004484 ORTHO05D005370 2.1e-265 919.1 689 67.8
FAN06G1787 Fragaria x ananassa HOM05D004484 ORTHO05D005370 2.1e-265 919.1 689 66.8
FAN01G0628 Fragaria x ananassa HOM05D004484 ORTHO05D005370 2.7e-265 918.7 689 66.2
FAN06G3319 Fragaria x ananassa HOM05D004484 ORTHO05D005370 4.6e-265 917.9 689 66.5
FAN10G1483 Fragaria x ananassa HOM05D004484 ORTHO05D005370 4.6e-265 917.9 689 66.6
FAN10G2369 Fragaria x ananassa HOM05D004484 ORTHO05D005370 5.1e-264 914.4 689 66.5
PGR042G0667 Punica granatum HOM05D004484 ORTHO05D005370 6.6e-264 914.1 690 65.4
Sabra14G0049400 Salix brachista HOM05D004484 ORTHO05D005370 4.4e-260 901.4 705 65.4
Glyma.05G125700 Glycine max HOM05D004484 ORTHO05D005370 2.2e-259 899.0 690 66.7
Phvul.002G205800 Phaseolus vulgaris HOM05D004484 ORTHO05D005370 3.2e-258 895.2 686 65.5
MELO3C006188.2 Cucumis melo HOM05D004484 ORTHO05D005370 7.1e-258 894.0 654 67.3
Gohir.A11G080700 Gossypium hirsutum HOM05D004484 ORTHO05D005370 1.2e-257 893.3 690 64.3
EL10Ac1g00900 Beta vulgaris HOM05D004484 ORTHO05D005370 3.5e-257 891.7 708 62.4
Gorai.007G091100 Gossypium raimondii HOM05D004484 ORTHO05D005370 2.3e-256 889.0 690 64.3
AUR62004221 Chenopodium quinoa HOM05D004484 ORTHO05D005370 5.1e-256 887.9 719 62.4
Gohir.D11G085300 Gossypium hirsutum HOM05D004484 ORTHO05D005370 5.6e-255 884.4 690 64.2
Lalb_Chr12g0208261 Lupinus albus HOM05D004484 ORTHO05D005370 1.2e-254 883.2 689 64.4
VMungo0251G1206 Vigna mungo HOM05D004484 ORTHO05D005370 1.1e-253 880.2 685 63.9
Aqoxy3G02138 Aquilegia oxysepala HOM05D004484 ORTHO05D005370 3.3e-247 858.6 688 63.4
Ah.13g073490 Amaranthus hybridus HOM05D004484 ORTHO05D005370 1.8e-245 852.8 713 60.2
TPR.G9845 Trifolium pratense HOM05D004484 ORTHO05D005370 9.3e-242 840.5 721 61.0
Cfa001721 Carpinus fangiana HOM05D004484 ORTHO05D005370 6.6e-240 834.3 584 71.1
FAN03G1897 Fragaria x ananassa HOM05D004484 ORTHO05D005370 3.3e-239 832.0 691 61.9
THA.LOC104817247 Tarenaya hassleriana HOM05D004484 ORTHO05D005370 7.3e-239 830.9 687 61.3
Sp1g35020 Schrenkiella parvula HOM05D004484 ORTHO05D005370 2.9e-235 818.9 681 58.4
AT1G48050 Arabidopsis thaliana HOM05D004484 ORTHO05D005370 6.4e-235 817.8 688 59.2
BcaB04g17469 Brassica carinata HOM05D004484 ORTHO05D005370 4.2e-234 815.1 690 58.0
GSVIVG01027609001 Vitis vinifera HOM05D004484 ORTHO05D005370 3.9e-232 808.5 657 63.3
Carub.0001s3716 Capsella rubella HOM05D004484 ORTHO05D005370 6.7e-232 807.7 688 58.3
BcaC07g37180 Brassica carinata HOM05D004484 ORTHO05D005370 8.7e-232 807.4 689 57.8
BraSC267t45947Z Brassica rapa HOM05D004484 ORTHO05D005370 2.5e-231 805.8 685 57.4
BolC8t47375H Brassica oleracea HOM05D004484 ORTHO05D005370 1.3e-230 803.5 685 57.5
C08p05620 Brassica napus HOM05D004484 ORTHO05D005370 3.7e-230 802.0 685 57.5
CARHR037700 Cardamine hirsuta HOM05D004484 ORTHO05D005370 5.8e-228 794.7 687 57.6
AL1G54570 Arabidopsis lyrata HOM05D004484 ORTHO05D005370 2.2e-227 792.7 671 58.4
A08p05330 Brassica napus HOM05D004484 ORTHO05D005370 4.9e-227 791.6 667 57.9
AUR62013627 Chenopodium quinoa HOM05D004484 ORTHO05D005370 3.2e-226 788.9 703 57.8
SHI13523 Sapria himalayana HOM05D004484 ORTHO05D005370 5.1e-224 781.6 664 61.1
Hund27347 Selenicereus undatus HOM05D004484 ORTHO05D005370 9.7e-215 750.7 604 63.4
Zm00001eb064930 Zea mays HOM05D004484 ORTHO05D005370 2.8e-214 749.2 672 57.0
COL.COLO4_07018 Corchorus olitorius HOM05D004484 ORTHO05D005370 9.0e-213 744.2 555 65.8
HPP92_027818 Vanilla planifolia HOM05D004484 ORTHO05D005370 8.8e-208 727.6 689 56.6
arahy.Tifrunner.gnm1.ann1.03ZR4A Arachis hypogaea HOM05D004484 ORTHO05D005370 8.2e-198 694.5 709 54.0
COL.COLO4_12548 Corchorus olitorius HOM05D004484 ORTHO05D005370 1.1e-197 694.1 712 52.1
arahy.Tifrunner.gnm1.ann1.5WGS6V Arachis hypogaea HOM05D004484 ORTHO05D005370 1.8e-197 693.3 662 56.5
unitig_749.g13780 Utricularia gibba HOM05D004484 ORTHO05D005370 1.1e-191 674.1 575 60.3
Potri.002G148200 Populus trichocarpa HOM05D004484 ORTHO05D005370 1.5e-191 673.7 492 69.3
Hma1.2p1_0086F.1_g044880 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 1.5e-186 657.1 457 72.4
arahy.Tifrunner.gnm1.ann1.5492A7 Arachis hypogaea HOM05D004484 ORTHO05D005370 9.4e-186 654.4 690 54.2
Lj9C569T11 Lonicera japonica HOM05D004484 ORTHO05D005370 4.4e-183 645.6 466 68.9
Thhalv10011351m.g Eutrema salsugineum HOM05D004484 ORTHO05D005370 4.1e-181 639.0 673 51.3
arahy.Tifrunner.gnm1.ann1.T9R8PC Arachis hypogaea HOM05D004484 ORTHO05D005370 3.2e-178 629.4 683 52.6
Pp3c22_11100 Physcomitrium patens HOM05D004484 ORTHO05D005370 2.1e-177 626.7 694 47.6
CDE04G3156 Ceratophyllum demersum HOM05D004484 ORTHO05D005370 1.0e-176 624.4 671 50.2
ATR0049G077 Amborella trichopoda HOM05D004484 ORTHO05D005370 1.4e-173 614.0 458 64.8
Aa31LG10G5650 Aethionema arabicum HOM05D004484 ORTHO05D005370 4.5e-172 609.0 587 54.0
SMO367G0514 Selaginella moellendorffii HOM05D004484 ORTHO05D005370 1.6e-169 600.5 686 45.6
Mapoly0129s0012 Marchantia polymorpha HOM05D004484 ORTHO05D005370 8.0e-161 571.6 647 46.5
PGR119G1536 Punica granatum HOM05D004484 ORTHO05D005370 1.8e-160 570.5 516 56.4
RcHm_v2.0_Chr1g0350581 Rosa chinensis HOM05D004484 ORTHO05D005370 9.5e-154 548.1 381 70.6
AagrBONN_evm.TU.Sc2ySwM_368.3373 Anthoceros agrestis HOM05D004484 ORTHO05D005370 8.3e-142 508.4 684 40.6
CBR_g30081 Chara braunii HOM05D004484 ORTHO05D005370 9.0e-112 408.7 453 44.2
RcHm_v2.0_Chr1g0350571 Rosa chinensis HOM05D004484 ORTHO05D005370 1.8e-104 384.4 297 65.7
SHI38996 Sapria himalayana HOM05D004484 ORTHO05D005370 3.7e-81 307.0 204 71.6
Hma1.2p1_0701F.1_g205850 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 4.8e-73 280.0 276 55.4
SHI38095 Sapria himalayana HOM05D004484 ORTHO05D005370 4.1e-72 276.9 190 70.0
SHI38094 Sapria himalayana HOM05D004484 ORTHO05D005370 8.5e-62 242.7 211 59.2
arahy.Tifrunner.gnm1.ann1.47H85H Arachis hypogaea HOM05D004484 ORTHO05D005370 3.7e-57 227.3 337 43.3
Glyma.06G243967 Glycine max HOM05D004484 ORTHO05D005370 6.6e-54 216.5 144 70.8
SEGI_20047 Sequoiadendron giganteum HOM05D004484 ORTHO05D005370 1.7e-46 191.8 223 46.6
Glyma.01G142851 Glycine max HOM05D004484 ORTHO05D005370 2.3e-46 191.4 164 60.4
MCO15G158 Micromonas commoda HOM05D004484 ORTHO05D005370 5.6e-45 186.8 521 28.6
Hma1.2p1_0170F.1_g075250 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 5.8e-42 176.8 202 50.5
Glyma.17G005802 Glycine max HOM05D004484 ORTHO05D005370 1.1e-40 172.6 192 53.6
Carub.0004s0917 Capsella rubella HOM05D004484 ORTHO05D005370 9.2e-40 169.5 255 41.2
SHI38995 Sapria himalayana HOM05D004484 ORTHO05D005370 1.3e-38 165.6 126 67.5
CAN.G594.7 Capsicum annuum HOM05D004484 ORTHO05D005370 3.3e-37 161.0 105 72.4
SEGI_29754 Sequoiadendron giganteum HOM05D004484 ORTHO05D005370 4.0e-35 154.1 116 63.8
SGA_v2.0_scaffold65G22170 Striga asiatica HOM05D004484 ORTHO05D005370 1.4e-32 145.6 232 40.1
TPR.G22633 Trifolium pratense HOM05D004484 ORTHO05D005370 1.4e-32 145.6 92 72.8
CAN.G205.22 Capsicum annuum HOM05D004484 ORTHO05D005370 3.2e-32 144.4 96 70.8
QL08p052505 Quercus lobata HOM05D004484 ORTHO05D005370 2.1e-31 141.7 180 48.9
Eucgr.I00725 Eucalyptus grandis HOM05D004484 ORTHO05D005370 2.1e-28 131.7 82 72.0
Os03g0856200 Oryza sativa ssp. japonica HOM05D004484 ORTHO05D005370 1.4e-27 129.0 97 61.9
Aa31LG10G5660 Aethionema arabicum HOM05D004484 ORTHO05D005370 5.8e-26 123.6 94 57.4
CAN.G279.6 Capsicum annuum HOM05D004484 ORTHO05D005370 1.1e-21 109.4 72 70.8
Solyc01g091430.2 Solanum lycopersicum HOM05D004484 ORTHO05D005370 2.5e-21 108.2 95 58.9
CAN.G388.14 Capsicum annuum HOM05D004484 ORTHO05D005370 3.1e-19 101.3 76 60.5
SGA_v2.0_scaffold10G05342 Striga asiatica HOM05D004484 ORTHO05D005370 2.6e-18 98.2 191 34.6
SGA_v2.0_scaffold172G39032 Striga asiatica HOM05D004484 ORTHO05D005370 1.3e-17 95.9 168 36.3
Solyc01g091440.4 Solanum lycopersicum HOM05D004484 ORTHO05D005370 1.7e-17 95.5 133 44.4
SGA_v2.0_scaffold29G12247 Striga asiatica HOM05D004484 ORTHO05D005370 3.0e-14 84.7 186 32.3
TPR.G9848 Trifolium pratense HOM05D000164 ORTHO05D000096 3.9e-14 84.3 55 65.5
Glyma.06G243934 Glycine max HOM05D004484 ORTHO05D005370 8.7e-14 83.2 80 51.2
Glyma.06G244302 Glycine max HOM05D004484 ORTHO05D005370 2.5e-13 81.6 80 50.0
PRCOL_00002704 Prasinoderma coloniale HOM05D004484 ORTHO05D005370 2.5e-13 81.6 258 28.7
Eucgr.E01421 Eucalyptus grandis HOM05D004484 ORTHO05D005370 1.3e-12 79.3 64 59.4
Eucgr.L02075 Eucalyptus grandis HOM05D004484 ORTHO05D005370 2.8e-12 78.2 64 60.9
CAN.G321.48 Capsicum annuum HOM05D001267 ORTHO05D002376 4.8e-12 77.4 62 64.5
arahy.Tifrunner.gnm1.ann1.0F06NC Arachis hypogaea HOM05D004484 ORTHO05D005370 5.3e-11 73.9 48 68.8
Cre10.g423800 Chlamydomonas reinhardtii HOM05D004484 ORTHO05D005370 4.9e-09 67.4 545 20.7
Hma1.2p1_1470F.1_g285600 Hydrangea macrophylla HOM05D000467 ORTHO05D011800 4.2e-08 64.3 53 62.3
Oeu032522.1 Olea europaea HOM05D004484 ORTHO05D005370 1.3e-06 59.3 63 50.8
AagrBONN_evm.TU.Sc2ySwM_368.3370 Anthoceros agrestis HOM05D004484 ORTHO05D005370 3.9e-06 57.8 111 30.6
unitig_749.g13781 Utricularia gibba HOM05D004484 ORTHO05D005370 5.1e-06 57.4 41 58.5


User provided reference genes

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