Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0935 Ceratophyllum demersum HOM05D002640 ORTHO05D003231 7.6e-214 746.9 374 100.0
CDE08G1380 Ceratophyllum demersum HOM05D002640 ORTHO05D003231 5.1e-178 627.9 331 94.3
Nn7g37023 Nelumbo nucifera HOM05D002640 ORTHO05D003231 9.1e-143 510.8 347 75.2
Dinv10811 Davidia involucrata HOM05D002640 ORTHO05D003231 4.7e-139 498.4 343 74.1
Thecc.10G133700 Theobroma cacao HOM05D002640 ORTHO05D003231 1.8e-138 496.5 343 74.1
GSVIVG01025815001 Vitis vinifera HOM05D002640 ORTHO05D003231 1.2e-137 493.8 345 73.9
MELO3C008653.2 Cucumis melo HOM05D002640 ORTHO05D003231 4.8e-136 488.4 342 74.0
TWI77G0284 Tripterygium wilfordii HOM05D002640 ORTHO05D003231 4.8e-136 488.4 345 73.6
CsaV3_2G009910 Cucumis sativus L. HOM05D002640 ORTHO05D003231 6.3e-136 488.0 342 73.7
Eucgr.K01682 Eucalyptus grandis HOM05D002640 ORTHO05D003231 8.3e-136 487.6 389 68.4
TAR623G0852 Trochodendron aralioides HOM05D002640 ORTHO05D003231 4.1e-135 485.3 346 72.3
Potri.016G029200 Populus trichocarpa HOM05D002640 ORTHO05D003231 1.2e-134 483.8 379 68.3
Duzib106G1211 Durio zibethinus HOM05D002640 ORTHO05D003231 1.6e-134 483.4 366 70.2
Prupe.7G019900 Prunus persica HOM05D002640 ORTHO05D003231 1.6e-134 483.4 343 71.7
ClCG11G010450 Citrullus lanatus HOM05D002640 ORTHO05D003231 3.5e-134 482.3 378 69.0
RcHm_v2.0_Chr3g0494601 Rosa chinensis HOM05D002640 ORTHO05D003231 3.5e-134 482.3 342 72.8
MD00G1025500 Malus domestica HOM05D002640 ORTHO05D003231 1.3e-133 480.3 358 70.9
Duzib114G0695 Durio zibethinus HOM05D002640 ORTHO05D003231 3.8e-133 478.8 340 72.4
Sed0027584 Sechium edule HOM05D002640 ORTHO05D003231 5.0e-133 478.4 345 72.8
TWI53G2001 Tripterygium wilfordii HOM05D002640 ORTHO05D003231 8.6e-133 477.6 380 66.8
Actinidia37853 Actinidia chinensis HOM05D002640 ORTHO05D003231 2.5e-132 476.1 357 71.4
arahy.Tifrunner.gnm1.ann1.PY7FNU Arachis hypogaea HOM05D002640 ORTHO05D003231 2.5e-132 476.1 361 70.4
Lj1g0022797 Lotus japonicus HOM05D002640 ORTHO05D003231 3.3e-132 475.7 352 71.0
Atru.chr1.1380 Acer truncatum HOM05D002640 ORTHO05D003231 4.2e-132 475.3 342 72.5
arahy.Tifrunner.gnm1.ann1.FM1LAN Arachis hypogaea HOM05D002640 ORTHO05D003231 7.2e-132 474.6 360 70.0
MD00G1108000 Malus domestica HOM05D002640 ORTHO05D003231 7.2e-132 474.6 379 68.1
Glyma.03G121000 Glycine max HOM05D002640 ORTHO05D003231 1.6e-131 473.4 349 71.1
Ca_08696_v3 Cicer arietinum L. HOM05D002640 ORTHO05D003231 2.1e-131 473.0 389 65.0
MBI11_g01739_MAGBIO Magnolia biondii HOM05D002640 ORTHO05D003231 3.6e-131 472.2 350 71.1
Phvul.001G117200 Phaseolus vulgaris HOM05D002640 ORTHO05D003231 4.7e-131 471.9 343 71.1
Sabra06G0021300 Salix brachista HOM05D002640 ORTHO05D003231 8.0e-131 471.1 389 66.8
CSS0028254 Camellia sinensis var. sinensis HOM05D002640 ORTHO05D003231 5.2e-130 468.4 334 72.2
FAN26G3239 Fragaria x ananassa HOM05D002640 ORTHO05D003231 8.9e-130 467.6 333 72.4
VMungo1383G1765 Vigna mungo HOM05D002640 ORTHO05D003231 1.2e-129 467.2 404 63.9
Potri.006G031900 Populus trichocarpa HOM05D002640 ORTHO05D003231 2.0e-129 466.5 346 70.5
QL07p013828 Quercus lobata HOM05D002640 ORTHO05D003231 2.0e-129 466.5 343 71.1
Gohir.A10G191700 Gossypium hirsutum HOM05D002640 ORTHO05D003231 5.7e-129 464.9 378 66.4
FAN28G1238 Fragaria x ananassa HOM05D002640 ORTHO05D003231 7.5e-129 464.5 350 70.3
FvH4_1g29220 Fragaria vesca HOM05D002640 ORTHO05D003231 1.3e-128 463.8 384 65.6
Sabra16G0033200 Salix brachista HOM05D002640 ORTHO05D003231 1.7e-128 463.4 346 70.2
CiPaw.09G052100 Carya illinoinensis HOM05D002640 ORTHO05D003231 2.2e-128 463.0 368 67.4
FAN23G1939 Fragaria x ananassa HOM05D002640 ORTHO05D003231 8.3e-128 461.1 355 69.0
Aqoxy1G00051 Aquilegia oxysepala HOM05D002640 ORTHO05D003231 1.4e-127 460.3 345 69.9
FAN19G2288 Fragaria x ananassa HOM05D002640 ORTHO05D003231 1.4e-127 460.3 358 68.7
Actinidia38202 Actinidia chinensis HOM05D002640 ORTHO05D003231 7.0e-127 458.0 359 67.1
Ciclev10013566m.g Citrus clementina HOM05D002640 ORTHO05D003231 7.0e-127 458.0 348 68.7
COL.COLO4_10242 Corchorus olitorius HOM05D002640 ORTHO05D003231 1.2e-126 457.2 339 70.2
Manes.08G162401 Manihot esculenta HOM05D002640 ORTHO05D003231 2.3e-125 453.0 376 66.0
Gohir.D10G199500 Gossypium hirsutum HOM05D002640 ORTHO05D003231 2.9e-125 452.6 338 70.4
Gorai.011G223600 Gossypium raimondii HOM05D002640 ORTHO05D003231 3.8e-125 452.2 367 66.8
Haze_20287 Corylus avellana HOM05D002640 ORTHO05D003231 5.0e-125 451.8 389 64.8
vmacro08975 Vaccinium macrocarpon HOM05D002640 ORTHO05D003231 9.5e-124 447.6 399 61.7
PSO384G3455 Papaver somniferum HOM05D002640 ORTHO05D003231 2.1e-123 446.4 305 74.8
Hund19066 Selenicereus undatus HOM05D002640 ORTHO05D003231 3.6e-123 445.7 351 70.7
Lalb_Chr14g0365421 Lupinus albus HOM05D002640 ORTHO05D003231 4.7e-123 445.3 386 63.2
MSTRG.6300 Avicennia marina HOM05D002640 ORTHO05D003231 1.8e-122 443.4 356 67.4
Lalb_Chr24g0400581 Lupinus albus HOM05D002640 ORTHO05D003231 5.2e-122 441.8 345 67.0
Oeu044234.2 Olea europaea HOM05D002640 ORTHO05D003231 1.2e-121 440.7 360 66.4
PSO339G4261 Papaver somniferum HOM05D002640 ORTHO05D003231 1.2e-121 440.7 305 73.4
Oeu022996.1 Olea europaea HOM05D002640 ORTHO05D003231 2.0e-121 439.9 402 61.9
PGR142G0829 Punica granatum HOM05D002640 ORTHO05D003231 2.6e-121 439.5 344 66.6
CANSAT64G1505 Cannabis sativa HOM05D002640 ORTHO05D003231 4.9e-120 435.3 393 61.3
Medtr7g088700 Medicago truncatula HOM05D002640 ORTHO05D003231 4.9e-120 435.3 336 69.0
Ah.04g150530 Amaranthus hybridus HOM05D002640 ORTHO05D003231 6.4e-120 434.9 363 65.3
DCAR_020604 Daucus carota HOM05D002640 ORTHO05D003231 8.3e-120 434.5 338 66.3
Migut.J01553 Erythranthe guttata HOM05D002640 ORTHO05D003231 3.2e-119 432.6 329 69.0
Gorai.010G212900 Gossypium raimondii HOM05D002640 ORTHO05D003231 7.8e-118 427.9 357 65.0
Gohir.D06G181500 Gossypium hirsutum HOM05D002640 ORTHO05D003231 3.9e-117 425.6 357 65.0
Lj2C412G3 Lonicera japonica HOM05D002640 ORTHO05D003231 8.6e-117 424.5 330 67.3
Gohir.A06G172600 Gossypium hirsutum HOM05D002640 ORTHO05D003231 3.3e-116 422.5 357 64.4
THA.LOC104805690 Tarenaya hassleriana HOM05D002640 ORTHO05D003231 9.5e-116 421.0 319 69.3
Rhsim04G0118000 Rhododendron simsii HOM05D002640 ORTHO05D003231 2.3e-114 416.4 316 69.9
ATR0782G064 Amborella trichopoda HOM05D002640 ORTHO05D003231 1.2e-113 414.1 310 69.0
TPR.G26612 Trifolium pratense HOM05D002640 ORTHO05D003231 2.9e-112 409.5 336 64.6
Nitab4.5_0000062g0270 Nicotiana tabacum HOM05D002640 ORTHO05D003231 4.1e-111 405.6 347 63.4
EL10Ac3g07304 Beta vulgaris HOM05D002640 ORTHO05D003231 5.4e-111 405.2 427 56.2
Solyc10g081020.2 Solanum lycopersicum HOM05D002640 ORTHO05D003231 1.2e-110 404.1 279 73.8
Aa31LG2G2460 Aethionema arabicum HOM05D002640 ORTHO05D003231 2.1e-110 403.3 313 68.7
Glyma.19G125600 Glycine max HOM05D002640 ORTHO05D003231 6.0e-110 401.7 254 78.3
Sopen10g031530 Solanum pennellii HOM05D002640 ORTHO05D003231 1.0e-109 401.0 354 62.1
Nitab4.5_0003225g0040 Nicotiana tabacum HOM05D002640 ORTHO05D003231 2.3e-109 399.8 344 62.8
SalBow6G2030 Salvia bowleyana HOM05D002640 ORTHO05D003231 1.1e-108 397.5 327 66.1
Cpa.g.sc1617.1 Carica papaya HOM05D002640 ORTHO05D003231 3.3e-108 396.0 256 77.3
HPP92_011291 Vanilla planifolia HOM05D002640 ORTHO05D003231 4.7e-107 392.1 321 65.7
PGSC0003DMG400028197 Solanum tuberosum HOM05D002640 ORTHO05D003231 1.1e-106 391.0 341 63.6
C06p39050 Brassica napus HOM05D002640 ORTHO05D003231 1.4e-106 390.6 275 72.4
BolC6t38997H Brassica oleracea HOM05D002640 ORTHO05D003231 1.4e-106 390.6 275 72.4
MBI13_g02373_MAGBIO Magnolia biondii HOM05D002640 ORTHO05D003231 1.4e-106 390.6 349 62.5
A07p32820 Brassica napus HOM05D002640 ORTHO05D003231 1.8e-106 390.2 275 72.4
CARHR057100 Cardamine hirsuta HOM05D002640 ORTHO05D003231 3.1e-106 389.4 304 67.1
HanXRQChr06g0177131 Helianthus annuus HOM05D002640 ORTHO05D003231 5.2e-106 388.7 354 62.1
BcaNung05532 Brassica carinata HOM05D002640 ORTHO05D003231 2.0e-105 386.7 306 66.7
Cc06_g21410 Coffea canephora HOM05D002640 ORTHO05D003231 2.2e-104 383.3 258 73.6
AUR62018416 Chenopodium quinoa HOM05D002640 ORTHO05D003231 8.3e-104 381.3 246 76.4
Thhalv10018001m.g Eutrema salsugineum HOM05D002640 ORTHO05D003231 8.3e-104 381.3 243 76.5
Carub.0002s1117 Capsella rubella HOM05D002640 ORTHO05D003231 3.2e-103 379.4 235 77.4
CAN.G128.94 Capsicum annuum HOM05D002640 ORTHO05D003231 4.1e-103 379.0 383 58.7
Lsat_1_v5_gn_8_83860 Lactuca sativa HOM05D002640 ORTHO05D003231 5.4e-103 378.6 274 71.2
AT1G65440 Arabidopsis thaliana HOM05D002640 ORTHO05D003231 7.1e-103 378.3 235 77.4
SGA_v2.0_scaffold66G22308 Striga asiatica HOM05D002640 ORTHO05D003231 3.5e-102 375.9 254 75.2
unitig_21.g20682 Utricularia gibba HOM05D002640 ORTHO05D003231 6.0e-102 375.2 305 65.6
Sp5g20200 Schrenkiella parvula HOM05D002640 ORTHO05D003231 7.8e-102 374.8 242 75.6
BraA07t30909Z Brassica rapa HOM05D002640 ORTHO05D003231 1.5e-100 370.5 275 69.5
MD10G1173400 Malus domestica HOM05D002640 ORTHO05D003231 1.9e-100 370.2 376 55.3
AL2G22130 Arabidopsis lyrata HOM05D002640 ORTHO05D003231 2.1e-99 366.7 347 59.4
BcaB05g24114 Brassica carinata HOM05D002640 ORTHO05D003231 1.1e-98 364.4 334 60.5
HanXRQChr04g0125591 Helianthus annuus HOM05D002640 ORTHO05D003231 1.5e-97 360.5 340 58.5
Prupe.8G211800 Prunus persica HOM05D002640 ORTHO05D003231 5.8e-97 358.6 242 73.6
Zm00001eb291590 Zea mays HOM05D002640 ORTHO05D003231 7.6e-97 358.2 263 67.7
A02p13220 Brassica napus HOM05D002640 ORTHO05D003231 1.7e-96 357.1 338 60.1
BraA02t06378Z Brassica rapa HOM05D002640 ORTHO05D003231 1.7e-96 357.1 338 60.1
SEGI_20723 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 3.8e-96 355.9 412 51.0
Peaxi162Scf00601g00007 Petunia axillaris HOM05D002640 ORTHO05D003231 4.9e-96 355.5 399 53.6
GSVIVG01012381001 Vitis vinifera HOM05D002640 ORTHO05D003231 6.4e-96 355.1 252 69.0
C02p17460 Brassica napus HOM05D002640 ORTHO05D003231 8.4e-96 354.8 336 59.8
DCAR_013529 Daucus carota HOM05D002640 ORTHO05D003231 1.1e-95 354.4 329 57.1
BolC2t07860H Brassica oleracea HOM05D002640 ORTHO05D003231 2.4e-95 353.2 336 59.5
GSVIVG01012377001 Vitis vinifera HOM05D002640 ORTHO05D003231 4.2e-95 352.4 252 68.7
SEGI_00617 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 2.7e-94 349.7 416 50.2
AUR62041298 Chenopodium quinoa HOM05D002640 ORTHO05D003231 5.1e-93 345.5 342 57.3
Lj9C650G10 Lonicera japonica HOM05D002640 ORTHO05D003231 1.1e-92 344.4 395 49.9
ECA236G4010 Erigeron canadensis HOM05D002640 ORTHO05D003231 6.9e-90 335.1 317 59.6
QL07p013799 Quercus lobata HOM05D002640 ORTHO05D003231 9.0e-90 334.7 209 76.1
QL04p022161 Quercus lobata HOM05D002640 ORTHO05D003231 2.0e-89 333.6 394 51.3
Migut.J01544 Erythranthe guttata HOM05D002640 ORTHO05D003231 2.6e-89 333.2 213 75.1
QL04p022175 Quercus lobata HOM05D002640 ORTHO05D003231 5.6e-84 315.5 373 50.4
SEGI_15393 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 9.6e-84 314.7 287 55.7
Medtr7g087475 Medicago truncatula HOM05D002640 ORTHO05D003231 1.4e-82 310.8 188 76.1
ECA247G4078 Erigeron canadensis HOM05D002640 ORTHO05D003231 3.1e-82 309.7 191 74.9
Os05g0494900 Oryza sativa ssp. japonica HOM05D002640 ORTHO05D003231 3.1e-82 309.7 236 66.9
COL.COLO4_25705 Corchorus olitorius HOM05D002640 ORTHO05D003231 7.1e-79 298.5 173 76.9
Lsat_1_v5_gn_9_32200 Lactuca sativa HOM05D002640 ORTHO05D003231 7.1e-79 298.5 241 61.4
HanXRQChr10g0298481 Helianthus annuus HOM05D002640 ORTHO05D003231 3.9e-77 292.7 190 72.1
AL2G12170 Arabidopsis lyrata HOM05D002640 ORTHO05D003231 5.1e-77 292.4 194 68.0
Carub.0002s0163 Capsella rubella HOM05D002640 ORTHO05D003231 3.3e-76 289.7 194 66.5
AT1G63210 Arabidopsis thaliana HOM05D002640 ORTHO05D003231 1.6e-75 287.3 191 68.1
Lj1C1081G2 Lonicera japonica HOM05D002640 ORTHO05D003231 4.0e-74 282.7 404 43.1
AagrBONN_evm.TU.Sc2ySwM_228.4939 Anthoceros agrestis HOM05D002640 ORTHO05D003231 4.5e-73 279.3 337 48.4
SMO364G0195 Selaginella moellendorffii HOM05D002640 ORTHO05D003231 1.1e-71 274.6 226 58.4
Pp3c5_23930 Physcomitrium patens HOM05D002640 ORTHO05D003231 4.2e-71 272.7 348 46.3
Potri.001G034300 Populus trichocarpa HOM05D002640 ORTHO05D003231 5.5e-71 272.3 397 42.1
Gohir.A05G396600 Gossypium hirsutum HOM05D002640 ORTHO05D003231 7.1e-71 271.9 274 52.9
Mapoly0025s0106 Marchantia polymorpha HOM05D002640 ORTHO05D003231 3.0e-69 266.5 413 43.3
Sp2g01330 Schrenkiella parvula HOM05D002640 ORTHO05D003231 2.5e-68 263.5 191 60.7
Thhalv10012314m.g Eutrema salsugineum HOM05D002640 ORTHO05D003231 3.3e-68 263.1 251 53.4
Phvul.005G013600 Phaseolus vulgaris HOM05D002640 ORTHO05D003231 3.1e-66 256.5 191 61.3
Ca_12390_v3 Cicer arietinum L. HOM05D002640 ORTHO05D003231 5.3e-66 255.8 203 57.6
TPR.G30407 Trifolium pratense HOM05D002640 ORTHO05D003231 5.8e-65 252.3 190 60.5
HPP92_011270 Vanilla planifolia HOM05D002640 ORTHO05D003231 1.7e-64 250.8 205 63.4
VMungo1080G1740 Vigna mungo HOM05D002640 ORTHO05D003231 2.9e-64 250.0 295 49.5
BcaC03g14705 Brassica carinata HOM05D002640 ORTHO05D003231 1.9e-63 247.3 153 75.8
C02p21400 Brassica napus HOM05D002640 ORTHO05D003231 1.9e-63 247.3 153 75.8
BolC2t08277H Brassica oleracea HOM05D002640 ORTHO05D003231 1.9e-63 247.3 153 75.8
Psat5g224720 Pisum sativum HOM05D002640 ORTHO05D003231 5.5e-63 245.7 190 58.4
Glyma.06G312200 Glycine max HOM05D002640 ORTHO05D003231 7.1e-63 245.4 338 45.0
Lalb_Chr15g0079261 Lupinus albus HOM05D002640 ORTHO05D003231 7.1e-63 245.4 301 46.5
Carub.0001s4195 Capsella rubella HOM05D002640 ORTHO05D003231 3.5e-62 243.0 197 58.9
CBR_g879 Chara braunii HOM05D002640 ORTHO05D003231 4.6e-62 242.7 387 40.8
SHI11341 Sapria himalayana HOM05D002640 ORTHO05D003231 1.3e-61 241.1 219 55.3
Lj3g0013532 Lotus japonicus HOM05D002640 ORTHO05D003231 5.1e-61 239.2 339 42.8
CBR_g876 Chara braunii HOM05D002640 ORTHO05D003231 5.7e-60 235.7 408 39.5
Pp3c5_24480 Physcomitrium patens HOM05D002640 ORTHO05D003231 4.5e-57 226.1 201 49.3
COL.COLO4_04288 Corchorus olitorius HOM05D002640 ORTHO05D003231 2.5e-55 220.3 263 47.9
Thecc.10G136200 Theobroma cacao HOM05D002640 ORTHO05D003231 4.3e-52 209.5 329 43.2
Manes.04G154475 Manihot esculenta HOM05D002640 ORTHO05D003231 7.7e-49 198.7 143 62.9
GSVIVG01012364001 Vitis vinifera HOM05D002640 ORTHO05D003231 1.3e-48 198.0 150 66.0
ECA236G0767 Erigeron canadensis HOM05D002640 ORTHO05D003231 1.0e-40 171.8 216 45.4
Psat0s699g0040 Pisum sativum HOM05D002640 ORTHO05D003231 5.2e-37 159.5 100 76.0
MCO05G283 Micromonas commoda HOM05D002640 ORTHO05D003231 2.0e-36 157.5 193 40.9
Psat0s699g0080 Pisum sativum HOM05D002640 ORTHO05D003231 1.6e-33 147.9 213 50.7
PRCOL_00004004 Prasinoderma coloniale HOM05D002640 ORTHO05D003231 4.2e-31 139.8 213 39.4
SEGI_17703 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 2.5e-23 114.0 70 74.3
Cre09.g403182 Chlamydomonas reinhardtii HOM05D002640 ORTHO05D003231 5.0e-16 89.7 200 29.0
Cfa022608 Carpinus fangiana HOM05D002640 ORTHO05D003231 3.4e-12 77.0 112 35.7
SEGI_33833 Sequoiadendron giganteum HOM05D002640 ORTHO05D003231 2.8e-06 57.4 254 30.7


User provided reference genes

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