Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00403 Aquilegia oxysepala HOM05D004484 ORTHO05D005370 0.0e+00 1365.1 690 100.0
Aqoxy3G02138 Aquilegia oxysepala HOM05D004484 ORTHO05D005370 0.0e+00 1077.0 690 78.0
Dinv32377 Davidia involucrata HOM05D004484 ORTHO05D005370 4.5e-305 1050.8 691 76.3
PSO478G5008 Papaver somniferum HOM05D004484 ORTHO05D005370 6.7e-301 1036.9 692 75.9
Nn1g01233 Nelumbo nucifera HOM05D004484 ORTHO05D005370 9.7e-300 1033.1 687 74.7
TAR629G2468 Trochodendron aralioides HOM05D004484 ORTHO05D005370 8.2e-299 1030.0 667 76.2
Prupe.2G145600 Prunus persica HOM05D004484 ORTHO05D005370 5.2e-293 1010.7 692 73.1
Hma1.2p1_0086F.1_g044870 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 6.3e-291 1003.8 686 73.8
MBI12_g10758_MAGBIO Magnolia biondii HOM05D004484 ORTHO05D005370 6.3e-291 1003.8 722 70.6
MD07G1121000 Malus domestica HOM05D004484 ORTHO05D005370 1.8e-290 1002.3 690 72.6
QL08p052472 Quercus lobata HOM05D004484 ORTHO05D005370 3.1e-290 1001.5 687 72.3
CiPaw.01G262000 Carya illinoinensis HOM05D004484 ORTHO05D005370 7.0e-290 1000.3 691 70.6
Oeu055487.1 Olea europaea HOM05D004484 ORTHO05D005370 1.7e-288 995.7 690 70.9
Cc02_g36700 Coffea canephora HOM05D004484 ORTHO05D005370 2.3e-288 995.3 687 72.2
Manes.01G265900 Manihot esculenta HOM05D004484 ORTHO05D005370 6.6e-288 993.8 688 70.5
Ca_19886_v3 Cicer arietinum L. HOM05D004484 ORTHO05D005370 3.3e-287 991.5 686 72.0
Haze_16815 Corylus avellana HOM05D004484 ORTHO05D005370 1.6e-286 989.2 747 66.9
Atru.chr5.309 Acer truncatum HOM05D004484 ORTHO05D005370 6.1e-286 987.3 686 71.0
Lalb_Chr13g0291731 Lupinus albus HOM05D004484 ORTHO05D005370 6.1e-286 987.3 691 71.1
Nitab4.5_0000457g0330 Nicotiana tabacum HOM05D004484 ORTHO05D005370 1.8e-285 985.7 688 70.9
CSS0036976 Camellia sinensis var. sinensis HOM05D004484 ORTHO05D005370 5.2e-285 984.2 696 72.4
GSVIVG01027610001 Vitis vinifera HOM05D004484 ORTHO05D005370 1.7e-283 979.2 674 70.8
Lj7A528T57 Lonicera japonica HOM05D004484 ORTHO05D005370 3.7e-283 978.0 698 71.5
TWI23G0227 Tripterygium wilfordii HOM05D004484 ORTHO05D005370 8.3e-283 976.9 688 70.2
Medtr4g023560 Medicago truncatula HOM05D004484 ORTHO05D005370 1.1e-282 976.5 686 71.3
CANSAT56G4533 Cannabis sativa HOM05D004484 ORTHO05D005370 1.8e-282 975.7 693 71.4
Lj3g0013484 Lotus japonicus HOM05D004484 ORTHO05D005370 1.2e-281 973.0 686 70.6
CAN.G388.13 Capsicum annuum HOM05D004484 ORTHO05D005370 1.6e-281 972.6 683 69.5
Potri.014G069700 Populus trichocarpa HOM05D004484 ORTHO05D005370 1.7e-280 969.1 691 70.8
Ca_27059_v3 Cicer arietinum L. HOM05D004484 ORTHO05D005370 2.3e-280 968.8 686 70.4
Thecc.01G376200 Theobroma cacao HOM05D004484 ORTHO05D005370 6.6e-280 967.2 687 69.0
FvH4_7g11900 Fragaria vesca HOM05D004484 ORTHO05D005370 1.1e-279 966.5 687 68.9
CANSAT56G1200 Cannabis sativa HOM05D004484 ORTHO05D005370 2.5e-279 965.3 693 70.6
Sed0020955 Sechium edule HOM05D004484 ORTHO05D005370 2.5e-279 965.3 690 69.0
PGSC0003DMG400012761 Solanum tuberosum HOM05D004484 ORTHO05D005370 1.2e-278 963.0 687 69.0
ECA234G1700 Erigeron canadensis HOM05D004484 ORTHO05D005370 1.6e-278 962.6 687 69.4
FAN01G0628 Fragaria x ananassa HOM05D004484 ORTHO05D005370 3.6e-278 961.4 687 68.3
Peaxi162Scf00021g01723 Petunia axillaris HOM05D004484 ORTHO05D005370 3.6e-278 961.4 687 69.0
Sc02g0002590 Simmondsia chinensis HOM05D004484 ORTHO05D005370 3.6e-278 961.4 672 70.2
Cpa.g.sc18.115 Carica papaya HOM05D004484 ORTHO05D005370 4.7e-278 961.1 692 68.5
FAN10G1483 Fragaria x ananassa HOM05D004484 ORTHO05D005370 2.3e-277 958.7 687 68.6
MSTRG.20748 Avicennia marina HOM05D004484 ORTHO05D005370 4.0e-277 958.0 690 68.6
FAN06G1787 Fragaria x ananassa HOM05D004484 ORTHO05D005370 8.9e-277 956.8 687 68.4
FAN06G3319 Fragaria x ananassa HOM05D004484 ORTHO05D005370 3.4e-276 954.9 687 68.1
FAN10G2369 Fragaria x ananassa HOM05D004484 ORTHO05D005370 5.8e-276 954.1 687 68.3
Psat7g233440 Pisum sativum HOM05D004484 ORTHO05D005370 5.8e-276 954.1 687 69.4
Solyc01g091350.4 Solanum lycopersicum HOM05D004484 ORTHO05D005370 1.3e-275 953.0 687 68.4
Eucgr.E01418 Eucalyptus grandis HOM05D004484 ORTHO05D005370 1.7e-275 952.6 691 69.0
Sopen01g037090 Solanum pennellii HOM05D004484 ORTHO05D005370 3.2e-274 948.3 687 68.0
SGA_v2.0_scaffold153G37012 Striga asiatica HOM05D004484 ORTHO05D005370 9.2e-274 946.8 690 68.4
DCAR_015907 Daucus carota HOM05D004484 ORTHO05D005370 2.7e-273 945.3 687 68.7
Glyma.05G125700 Glycine max HOM05D004484 ORTHO05D005370 4.6e-273 944.5 692 68.5
ClCG05G002220 Citrullus lanatus HOM05D004484 ORTHO05D005370 1.3e-272 943.0 690 68.1
Nitab4.5_0005372g0070 Nicotiana tabacum HOM05D004484 ORTHO05D005370 1.3e-272 943.0 698 67.9
Phvul.002G205800 Phaseolus vulgaris HOM05D004484 ORTHO05D005370 6.6e-272 940.6 684 68.4
CsaV3_3G009680 Cucumis sativus L. HOM05D004484 ORTHO05D005370 1.1e-271 939.9 690 67.1
Ciclev10019016m.g Citrus clementina HOM05D004484 ORTHO05D005370 4.7e-270 934.5 691 67.9
Lalb_Chr12g0208261 Lupinus albus HOM05D004484 ORTHO05D005370 8.0e-270 933.7 691 67.7
Migut.B01635 Erythranthe guttata HOM05D004484 ORTHO05D005370 2.3e-269 932.2 690 67.8
HanXRQChr16g0520161 Helianthus annuus HOM05D004484 ORTHO05D005370 5.2e-269 931.0 689 66.5
Lsat_1_v5_gn_4_43240 Lactuca sativa HOM05D004484 ORTHO05D005370 8.9e-269 930.2 686 67.8
VMungo0251G1206 Vigna mungo HOM05D004484 ORTHO05D005370 1.2e-268 929.9 687 66.5
arahy.Tifrunner.gnm1.ann1.V1M046 Arachis hypogaea HOM05D004484 ORTHO05D005370 1.5e-268 929.5 687 68.9
arahy.Tifrunner.gnm1.ann1.6K85L9 Arachis hypogaea HOM05D004484 ORTHO05D005370 2.0e-268 929.1 687 69.0
arahy.Tifrunner.gnm1.ann1.HW1IVJ Arachis hypogaea HOM05D004484 ORTHO05D005370 2.0e-268 929.1 687 69.0
arahy.Tifrunner.gnm1.ann1.Q9SWB6 Arachis hypogaea HOM05D004484 ORTHO05D005370 7.5e-268 927.2 687 68.9
PGR042G0667 Punica granatum HOM05D004484 ORTHO05D005370 1.7e-267 926.0 692 66.3
vmacro13399 Vaccinium macrocarpon HOM05D004484 ORTHO05D005370 8.3e-267 923.7 692 68.5
EL10Ac1g00900 Beta vulgaris HOM05D004484 ORTHO05D005370 7.8e-265 917.1 711 64.3
MELO3C006188.2 Cucumis melo HOM05D004484 ORTHO05D005370 6.8e-261 904.0 655 67.0
Sabra14G0049400 Salix brachista HOM05D004484 ORTHO05D005370 1.2e-260 903.3 705 65.7
AUR62004221 Chenopodium quinoa HOM05D004484 ORTHO05D005370 5.8e-260 901.0 722 63.7
Gohir.A11G080700 Gossypium hirsutum HOM05D004484 ORTHO05D005370 9.2e-258 893.6 688 64.2
Gorai.007G091100 Gossypium raimondii HOM05D004484 ORTHO05D005370 6.6e-256 887.5 688 64.2
Gohir.D11G085300 Gossypium hirsutum HOM05D004484 ORTHO05D005370 9.5e-255 883.6 688 64.1
FAN03G1897 Fragaria x ananassa HOM05D004484 ORTHO05D005370 2.0e-252 875.9 689 64.0
TPR.G9845 Trifolium pratense HOM05D004484 ORTHO05D005370 2.7e-249 865.5 717 62.9
Ah.13g073490 Amaranthus hybridus HOM05D004484 ORTHO05D005370 3.0e-248 862.1 716 62.0
GSVIVG01027609001 Vitis vinifera HOM05D004484 ORTHO05D005370 1.4e-245 853.2 661 65.5
AT1G48050 Arabidopsis thaliana HOM05D004484 ORTHO05D005370 5.8e-244 847.8 690 60.9
Cfa001721 Carpinus fangiana HOM05D004484 ORTHO05D005370 7.6e-244 847.4 585 71.3
Carub.0001s3716 Capsella rubella HOM05D004484 ORTHO05D005370 4.9e-243 844.7 689 60.7
THA.LOC104817247 Tarenaya hassleriana HOM05D004484 ORTHO05D005370 4.2e-242 841.6 687 61.6
BraSC267t45947Z Brassica rapa HOM05D004484 ORTHO05D005370 3.9e-240 835.1 687 58.7
BcaB04g17469 Brassica carinata HOM05D004484 ORTHO05D005370 1.1e-239 833.6 691 58.9
C08p05620 Brassica napus HOM05D004484 ORTHO05D005370 1.9e-239 832.8 687 59.0
SHI13523 Sapria himalayana HOM05D004484 ORTHO05D005370 2.5e-239 832.4 666 62.8
BolC8t47375H Brassica oleracea HOM05D004484 ORTHO05D005370 9.6e-239 830.5 687 58.8
Sp1g35020 Schrenkiella parvula HOM05D004484 ORTHO05D005370 2.8e-238 828.9 678 59.4
BcaC07g37180 Brassica carinata HOM05D004484 ORTHO05D005370 6.2e-238 827.8 690 59.0
CARHR037700 Cardamine hirsuta HOM05D004484 ORTHO05D005370 1.4e-237 826.6 690 59.6
AL1G54570 Arabidopsis lyrata HOM05D004484 ORTHO05D005370 2.4e-237 825.9 673 60.3
AUR62013627 Chenopodium quinoa HOM05D004484 ORTHO05D005370 9.3e-234 813.9 706 59.9
A08p05330 Brassica napus HOM05D004484 ORTHO05D005370 1.1e-231 807.0 667 58.6
Hund27347 Selenicereus undatus HOM05D004484 ORTHO05D005370 1.0e-224 783.9 607 65.4
HPP92_027818 Vanilla planifolia HOM05D004484 ORTHO05D005370 1.4e-221 773.5 686 59.0
Zm00001eb064930 Zea mays HOM05D004484 ORTHO05D005370 2.9e-219 765.8 674 58.2
COL.COLO4_07018 Corchorus olitorius HOM05D004484 ORTHO05D005370 2.3e-216 756.1 554 67.0
arahy.Tifrunner.gnm1.ann1.5WGS6V Arachis hypogaea HOM05D004484 ORTHO05D005370 5.7e-207 724.9 663 59.4
arahy.Tifrunner.gnm1.ann1.03ZR4A Arachis hypogaea HOM05D004484 ORTHO05D005370 4.8e-206 721.8 703 56.8
COL.COLO4_12548 Corchorus olitorius HOM05D004484 ORTHO05D005370 3.7e-198 695.7 707 51.5
arahy.Tifrunner.gnm1.ann1.5492A7 Arachis hypogaea HOM05D004484 ORTHO05D005370 2.0e-196 689.9 679 56.8
Potri.002G148200 Populus trichocarpa HOM05D004484 ORTHO05D005370 5.5e-194 681.8 491 69.9
unitig_749.g13780 Utricularia gibba HOM05D004484 ORTHO05D005370 2.7e-193 679.5 571 60.8
Hma1.2p1_0086F.1_g044880 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 1.8e-192 676.8 459 75.4
ATR0049G077 Amborella trichopoda HOM05D004484 ORTHO05D005370 1.3e-190 670.6 458 70.1
arahy.Tifrunner.gnm1.ann1.T9R8PC Arachis hypogaea HOM05D004484 ORTHO05D005370 1.2e-185 654.1 692 54.5
Lj9C569T11 Lonicera japonica HOM05D004484 ORTHO05D005370 8.0e-185 651.4 466 69.5
CDE04G3156 Ceratophyllum demersum HOM05D004484 ORTHO05D005370 6.8e-184 648.3 675 51.0
Pp3c22_11100 Physcomitrium patens HOM05D004484 ORTHO05D005370 1.6e-180 637.1 703 48.1
Thhalv10011351m.g Eutrema salsugineum HOM05D004484 ORTHO05D005370 2.2e-179 633.3 632 52.7
SMO367G0514 Selaginella moellendorffii HOM05D004484 ORTHO05D005370 2.9e-179 632.9 691 47.2
Aa31LG10G5650 Aethionema arabicum HOM05D004484 ORTHO05D005370 4.1e-173 612.5 586 55.1
Mapoly0129s0012 Marchantia polymorpha HOM05D004484 ORTHO05D005370 5.7e-167 592.0 632 48.3
PGR119G1536 Punica granatum HOM05D004484 ORTHO05D005370 5.6e-162 575.5 516 58.5
RcHm_v2.0_Chr1g0350581 Rosa chinensis HOM05D004484 ORTHO05D005370 8.0e-161 571.6 377 74.0
AagrBONN_evm.TU.Sc2ySwM_368.3373 Anthoceros agrestis HOM05D004484 ORTHO05D005370 1.4e-149 534.3 689 41.4
CBR_g30081 Chara braunii HOM05D004484 ORTHO05D005370 7.1e-117 425.6 470 45.5
RcHm_v2.0_Chr1g0350571 Rosa chinensis HOM05D004484 ORTHO05D005370 7.1e-109 399.1 299 65.9
SHI38996 Sapria himalayana HOM05D004484 ORTHO05D005370 3.8e-86 323.6 204 76.0
Hma1.2p1_0701F.1_g205850 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 2.8e-81 307.4 324 54.3
SHI38095 Sapria himalayana HOM05D004484 ORTHO05D005370 1.1e-77 295.4 190 75.8
SHI38094 Sapria himalayana HOM05D004484 ORTHO05D005370 1.3e-65 255.4 214 60.7
Glyma.06G243967 Glycine max HOM05D004484 ORTHO05D005370 2.0e-55 221.5 144 70.1
Glyma.01G142851 Glycine max HOM05D004484 ORTHO05D005370 1.1e-53 215.7 164 66.5
arahy.Tifrunner.gnm1.ann1.47H85H Arachis hypogaea HOM05D004484 ORTHO05D005370 3.3e-53 214.2 340 40.6
SEGI_20047 Sequoiadendron giganteum HOM05D004484 ORTHO05D005370 3.3e-53 214.2 222 48.2
MCO15G158 Micromonas commoda HOM05D004484 ORTHO05D005370 9.5e-45 186.0 521 29.6
Glyma.17G005802 Glycine max HOM05D004484 ORTHO05D005370 2.3e-43 181.4 192 53.6
Carub.0004s0917 Capsella rubella HOM05D004484 ORTHO05D005370 4.0e-43 180.6 252 42.5
SEGI_29754 Sequoiadendron giganteum HOM05D004484 ORTHO05D005370 1.0e-38 166.0 116 69.8
CAN.G594.7 Capsicum annuum HOM05D004484 ORTHO05D005370 1.7e-38 165.2 105 74.3
SHI38995 Sapria himalayana HOM05D004484 ORTHO05D005370 3.9e-38 164.1 129 65.9
Hma1.2p1_0170F.1_g075250 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 2.8e-36 157.9 202 49.5
TPR.G22633 Trifolium pratense HOM05D004484 ORTHO05D005370 1.1e-35 156.0 92 79.3
QL08p052505 Quercus lobata HOM05D004484 ORTHO05D005370 8.9e-35 152.9 178 47.8
SGA_v2.0_scaffold65G22170 Striga asiatica HOM05D004484 ORTHO05D005370 4.9e-33 147.1 201 42.3
CAN.G205.22 Capsicum annuum HOM05D004484 ORTHO05D005370 7.1e-32 143.3 89 74.2
Os03g0856200 Oryza sativa ssp. japonica HOM05D004484 ORTHO05D005370 2.5e-29 134.8 97 66.0
Aa31LG10G5660 Aethionema arabicum HOM05D004484 ORTHO05D005370 3.1e-27 127.9 92 64.1
Eucgr.I00725 Eucalyptus grandis HOM05D004484 ORTHO05D005370 1.5e-26 125.6 82 70.7
CAN.G279.6 Capsicum annuum HOM05D004484 ORTHO05D005370 6.6e-22 110.2 72 72.2
Solyc01g091430.2 Solanum lycopersicum HOM05D004484 ORTHO05D005370 1.1e-21 109.4 95 60.0
SGA_v2.0_scaffold10G05342 Striga asiatica HOM05D004484 ORTHO05D005370 1.8e-19 102.1 191 36.1
CAN.G388.14 Capsicum annuum HOM05D004484 ORTHO05D005370 8.9e-19 99.8 76 56.6
SGA_v2.0_scaffold172G39032 Striga asiatica HOM05D004484 ORTHO05D005370 1.2e-18 99.4 168 38.1
Glyma.06G243934 Glycine max HOM05D004484 ORTHO05D005370 2.6e-18 98.2 81 59.3
PRCOL_00002704 Prasinoderma coloniale HOM05D004484 ORTHO05D005370 3.4e-18 97.8 492 25.4
Glyma.06G244302 Glycine max HOM05D004484 ORTHO05D005370 1.7e-17 95.5 134 44.8
SGA_v2.0_scaffold29G12247 Striga asiatica HOM05D004484 ORTHO05D005370 4.2e-16 90.9 187 34.8
Solyc01g091440.4 Solanum lycopersicum HOM05D004484 ORTHO05D005370 1.2e-15 89.4 133 42.9
TPR.G9848 Trifolium pratense HOM05D000164 ORTHO05D000096 7.8e-15 86.7 55 70.9
Eucgr.E01421 Eucalyptus grandis HOM05D004484 ORTHO05D005370 2.3e-14 85.1 67 64.2
CAN.G321.48 Capsicum annuum HOM05D001267 ORTHO05D002376 5.6e-13 80.5 80 53.8
Eucgr.L02075 Eucalyptus grandis HOM05D004484 ORTHO05D005370 8.1e-12 76.6 67 59.7
arahy.Tifrunner.gnm1.ann1.0F06NC Arachis hypogaea HOM05D004484 ORTHO05D005370 1.1e-11 76.3 48 75.0
Cre10.g423800 Chlamydomonas reinhardtii HOM05D004484 ORTHO05D005370 1.8e-11 75.5 567 22.0
Cfa025796 Carpinus fangiana HOM05D004484 ORTHO05D005370 1.2e-10 72.8 382 24.1
AagrBONN_evm.TU.Sc2ySwM_368.3370 Anthoceros agrestis HOM05D004484 ORTHO05D005370 3.2e-08 64.7 111 33.3
Cfa021664 Carpinus fangiana HOM05D006139 ORTHO05D007681 3.2e-08 64.7 500 21.0
Hma1.2p1_1470F.1_g285600 Hydrangea macrophylla HOM05D000467 ORTHO05D011800 1.2e-07 62.8 52 61.5
Oeu032522.1 Olea europaea HOM05D004484 ORTHO05D005370 3.5e-07 61.2 47 63.8
unitig_749.g13781 Utricularia gibba HOM05D004484 ORTHO05D005370 5.1e-06 57.4 41 65.9


User provided reference genes

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