Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02869 Aquilegia oxysepala HOM05D003203 ORTHO05D003526 4.7e-266 920.6 457 100.0
Aqoxy4G03208 Aquilegia oxysepala HOM05D003203 ORTHO05D003526 4.8e-194 681.4 497 71.8
TAR636G0568 Trochodendron aralioides HOM05D003203 ORTHO05D003526 5.0e-175 618.2 417 73.1
RcHm_v2.0_Chr5g0060751 Rosa chinensis HOM05D003203 ORTHO05D003526 5.5e-174 614.8 386 76.7
FAN16G3448 Fragaria x ananassa HOM05D003203 ORTHO05D003526 9.3e-174 614.0 387 76.5
CANSAT54G1869 Cannabis sativa HOM05D003203 ORTHO05D003526 1.6e-173 613.2 395 74.7
CSS0047004 Camellia sinensis var. sinensis HOM05D003203 ORTHO05D003526 3.6e-173 612.1 373 78.6
QL01p037166 Quercus lobata HOM05D003203 ORTHO05D003526 7.9e-173 610.9 415 73.0
FAN11G3892 Fragaria x ananassa HOM05D003203 ORTHO05D003526 1.3e-172 610.1 387 76.5
Lj3g0012673 Lotus japonicus HOM05D003203 ORTHO05D003526 1.8e-172 609.8 373 77.7
Lj3g0020808 Lotus japonicus HOM05D003203 ORTHO05D003526 2.3e-172 609.4 396 74.7
Sabra16G0090500 Salix brachista HOM05D003203 ORTHO05D003526 2.3e-172 609.4 441 68.3
Dinv32789 Davidia involucrata HOM05D003203 ORTHO05D003526 1.9e-171 606.3 407 73.5
FvH4_3g33360 Fragaria vesca HOM05D003203 ORTHO05D003526 1.9e-171 606.3 387 76.2
Lalb_Chr03g0027111 Lupinus albus HOM05D003203 ORTHO05D003526 3.3e-171 605.5 406 72.9
Glyma.11G152960 Glycine max HOM05D003203 ORTHO05D003526 4.3e-171 605.1 416 71.4
arahy.Tifrunner.gnm1.ann1.DWB64P Arachis hypogaea HOM05D003203 ORTHO05D003526 5.7e-171 604.7 406 73.4
PSO339G5999 Papaver somniferum HOM05D003203 ORTHO05D003526 5.7e-171 604.7 374 78.6
Medtr4g060795 Medicago truncatula HOM05D003203 ORTHO05D003526 7.4e-171 604.4 396 73.5
COL.COLO4_25248 Corchorus olitorius HOM05D003203 ORTHO05D003526 9.7e-171 604.0 411 72.3
GSVIVG01025133001 Vitis vinifera HOM05D003203 ORTHO05D003526 9.7e-171 604.0 385 75.8
TAR633G1300 Trochodendron aralioides HOM05D003203 ORTHO05D003526 1.3e-170 603.6 386 76.7
arahy.Tifrunner.gnm1.ann1.GJ7521 Arachis hypogaea HOM05D003203 ORTHO05D003526 2.2e-170 602.8 394 74.9
Thecc.09G260300 Theobroma cacao HOM05D003203 ORTHO05D003526 2.8e-170 602.4 392 74.0
Cfa011365 Carpinus fangiana HOM05D003203 ORTHO05D003526 8.2e-170 600.9 374 77.3
Manes.11G141000 Manihot esculenta HOM05D003203 ORTHO05D003526 1.1e-169 600.5 374 76.7
Ca_19241_v3 Cicer arietinum L. HOM05D003203 ORTHO05D003526 1.4e-169 600.1 391 74.2
FvH4_4g02320 Fragaria vesca HOM05D003203 ORTHO05D003526 1.8e-169 599.7 383 75.5
Ciclev10027702m.g Citrus clementina HOM05D003203 ORTHO05D003526 2.4e-169 599.4 416 70.0
MD11G1129800 Malus domestica HOM05D003203 ORTHO05D003526 3.1e-169 599.0 399 71.9
MSTRG.21144 Avicennia marina HOM05D003203 ORTHO05D003526 5.3e-169 598.2 374 77.3
RcHm_v2.0_Chr4g0389641 Rosa chinensis HOM05D003203 ORTHO05D003526 5.3e-169 598.2 389 73.8
Oeu005910.3 Olea europaea HOM05D003203 ORTHO05D003526 6.9e-169 597.8 400 73.2
Prupe.6G094700 Prunus persica HOM05D003203 ORTHO05D003526 9.1e-169 597.4 400 71.8
Eucgr.B02467 Eucalyptus grandis HOM05D003203 ORTHO05D003526 1.5e-168 596.7 415 70.1
TPR.G14912 Trifolium pratense HOM05D003203 ORTHO05D003526 2.0e-168 596.3 409 70.9
Migut.D02182 Erythranthe guttata HOM05D003203 ORTHO05D003526 2.6e-168 595.9 395 74.7
CsaV3_1G013020 Cucumis sativus L. HOM05D003203 ORTHO05D003526 3.4e-168 595.5 416 70.9
FAN12G0401 Fragaria x ananassa HOM05D003203 ORTHO05D003526 7.7e-168 594.3 398 73.4
Phvul.011G072500 Phaseolus vulgaris HOM05D003203 ORTHO05D003526 7.7e-168 594.3 373 75.6
MELO3C005030.2 Cucumis melo HOM05D003203 ORTHO05D003526 1.0e-167 594.0 374 76.5
HanXRQChr13g0401461 Helianthus annuus HOM05D003203 ORTHO05D003526 1.3e-167 593.6 412 70.6
CiPaw.13G106900 Carya illinoinensis HOM05D003203 ORTHO05D003526 2.9e-167 592.4 387 72.9
Gorai.009G078900 Gossypium raimondii HOM05D003203 ORTHO05D003526 2.9e-167 592.4 426 70.2
PSO765G0203 Papaver somniferum HOM05D003203 ORTHO05D003526 2.9e-167 592.4 374 76.7
TWI31G0332 Tripterygium wilfordii HOM05D003203 ORTHO05D003526 3.8e-167 592.0 377 74.5
Psat7g223280 Pisum sativum HOM05D003203 ORTHO05D003526 5.0e-167 591.7 385 74.0
Sed0015984 Sechium edule HOM05D003203 ORTHO05D003526 5.0e-167 591.7 374 77.0
ClCG03G002340 Citrullus lanatus HOM05D003203 ORTHO05D003526 1.9e-166 589.7 407 72.5
Nn2g10680 Nelumbo nucifera HOM05D003203 ORTHO05D003526 5.5e-166 588.2 399 71.4
Sc15g0001570 Simmondsia chinensis HOM05D003203 ORTHO05D003526 9.4e-166 587.4 407 70.3
Lj1C185T11 Lonicera japonica HOM05D003203 ORTHO05D003526 1.2e-165 587.0 388 72.4
PGR102G2647 Punica granatum HOM05D003203 ORTHO05D003526 1.2e-165 587.0 407 70.8
SHI27628 Sapria himalayana HOM05D003203 ORTHO05D003526 1.2e-165 587.0 370 75.4
PSO063G5461 Papaver somniferum HOM05D003203 ORTHO05D003526 1.6e-165 586.6 392 74.5
VMungo1127G1096 Vigna mungo HOM05D003203 ORTHO05D003526 1.6e-165 586.6 373 74.8
Lj1A185G36 Lonicera japonica HOM05D003203 ORTHO05D003526 6.1e-165 584.7 373 74.0
SGA_v2.0_scaffold97G29171 Striga asiatica HOM05D003203 ORTHO05D003526 6.1e-165 584.7 410 70.2
CAN.G352.40 Capsicum annuum HOM05D003203 ORTHO05D003526 7.9e-165 584.3 401 71.8
HPP92_010183 Vanilla planifolia HOM05D003203 ORTHO05D003526 7.9e-165 584.3 413 69.2
Atru.chr3.3693 Acer truncatum HOM05D003203 ORTHO05D003526 1.0e-164 583.9 393 72.5
Cpa.g.sc139.65 Carica papaya HOM05D003203 ORTHO05D003526 1.0e-164 583.9 387 72.4
Sopen11g030070 Solanum pennellii HOM05D003203 ORTHO05D003526 1.4e-164 583.6 401 71.6
ATR1159G092 Amborella trichopoda HOM05D003203 ORTHO05D003526 1.8e-164 583.2 376 73.7
Solyc11g072430.3 Solanum lycopersicum HOM05D003203 ORTHO05D003526 3.9e-164 582.0 401 71.3
Lsat_1_v5_gn_6_26241 Lactuca sativa HOM05D003203 ORTHO05D003526 1.1e-163 580.5 415 69.4
Zm00001eb302520 Zea mays HOM05D003203 ORTHO05D003526 3.3e-163 578.9 410 68.8
Migut.N02091 Erythranthe guttata HOM05D003203 ORTHO05D003526 9.7e-163 577.4 374 75.1
Cc01_g11550 Coffea canephora HOM05D003203 ORTHO05D003526 8.2e-162 574.3 374 74.1
Os07g0191700 Oryza sativa ssp. japonica HOM05D003203 ORTHO05D003526 5.3e-161 571.6 383 70.5
AUR62006513 Chenopodium quinoa HOM05D003203 ORTHO05D003526 6.9e-161 571.2 378 73.0
SalBow3G4618 Salvia bowleyana HOM05D003203 ORTHO05D003526 5.9e-160 568.2 434 66.4
Thhalv10006605m.g Eutrema salsugineum HOM05D003203 ORTHO05D003526 2.2e-159 566.2 393 70.0
DCAR_006042 Daucus carota HOM05D003203 ORTHO05D003526 2.9e-159 565.8 405 68.4
EL10Ac9g22449 Beta vulgaris HOM05D003203 ORTHO05D003526 5.0e-159 565.1 376 72.1
THA.LOC104815752 Tarenaya hassleriana HOM05D003203 ORTHO05D003526 1.1e-158 563.9 385 69.9
Aa31sc36G120 Aethionema arabicum HOM05D003203 ORTHO05D003526 1.9e-158 563.1 420 66.0
BcaC07g42504 Brassica carinata HOM05D003203 ORTHO05D003526 1.9e-158 563.1 402 69.2
Gohir.D05G077500 Gossypium hirsutum HOM05D003203 ORTHO05D003526 9.4e-158 560.8 426 67.1
BcaC07g41968 Brassica carinata HOM05D003203 ORTHO05D003526 3.6e-157 558.9 398 69.1
C08p50260 Brassica napus HOM05D003203 ORTHO05D003526 3.6e-157 558.9 398 69.1
BolC8t52555H Brassica oleracea HOM05D003203 ORTHO05D003526 3.6e-157 558.9 398 69.1
CDE07G0291 Ceratophyllum demersum HOM05D003203 ORTHO05D003526 1.0e-156 557.4 376 70.5
AL6G53580 Arabidopsis lyrata HOM05D003203 ORTHO05D003526 1.4e-156 557.0 399 67.4
AT1G07910 Arabidopsis thaliana HOM05D003203 ORTHO05D003526 2.3e-156 556.2 407 66.6
AUR62025015 Chenopodium quinoa HOM05D003203 ORTHO05D003526 3.0e-156 555.8 457 63.2
Duzib168G0563 Durio zibethinus HOM05D003203 ORTHO05D003526 6.7e-156 554.7 432 65.3
BraA09t41949Z Brassica rapa HOM05D003203 ORTHO05D003526 8.8e-156 554.3 410 66.3
A09p66110 Brassica napus HOM05D003203 ORTHO05D003526 2.0e-155 553.1 410 65.9
Carub.0001s0725 Capsella rubella HOM05D003203 ORTHO05D003526 3.3e-155 552.4 377 69.5
Rhsim01G0220300 Rhododendron simsii HOM05D003203 ORTHO05D003526 1.3e-154 550.4 502 57.2
Gohir.A05G074700 Gossypium hirsutum HOM05D003203 ORTHO05D003526 1.7e-154 550.1 340 77.1
BcaB02g06702 Brassica carinata HOM05D003203 ORTHO05D003526 8.2e-154 547.7 401 65.8
A06p05020 Brassica napus HOM05D003203 ORTHO05D003526 2.4e-153 546.2 411 65.2
BraA06t23708Z Brassica rapa HOM05D003203 ORTHO05D003526 2.4e-153 546.2 411 65.2
Lj2C1036G7 Lonicera japonica HOM05D003203 ORTHO05D003526 5.3e-153 545.0 416 65.1
Haze_23916 Corylus avellana HOM05D003203 ORTHO05D003526 2.6e-152 542.7 374 71.7
SalBow6G0781 Salvia bowleyana HOM05D003203 ORTHO05D003526 2.6e-152 542.7 373 71.0
Carub.0011s0009 Capsella rubella HOM05D003203 ORTHO05D003526 1.0e-151 540.8 407 64.4
BcaC05g24708 Brassica carinata HOM05D003203 ORTHO05D003526 1.3e-151 540.4 401 65.6
unitig_736.g22420 Utricularia gibba HOM05D003203 ORTHO05D003526 1.7e-151 540.0 383 71.0
BolC5t29358H Brassica oleracea HOM05D003203 ORTHO05D003526 2.5e-150 536.2 401 65.6
Nitab4.5_0001802g0140 Nicotiana tabacum HOM05D003203 ORTHO05D003526 7.2e-150 534.6 401 67.1
C05p05960 Brassica napus HOM05D003203 ORTHO05D003526 1.2e-149 533.9 401 65.3
ECA233G2891 Erigeron canadensis HOM05D003203 ORTHO05D003526 1.6e-149 533.5 393 67.4
Nitab4.5_0002129g0110 Nicotiana tabacum HOM05D003203 ORTHO05D003526 2.6e-147 526.2 401 66.6
AL1G18200 Arabidopsis lyrata HOM05D003203 ORTHO05D003526 2.2e-146 523.1 406 64.3
SEGI_33151 Sequoiadendron giganteum HOM05D003203 ORTHO05D003526 1.4e-145 520.4 378 66.4
FAN22G0069 Fragaria x ananassa HOM05D003203 ORTHO05D003526 5.3e-145 518.5 383 67.4
FAN17G1981 Fragaria x ananassa HOM05D003203 ORTHO05D003526 2.5e-142 509.6 383 67.1
SpUn0400_0010 Schrenkiella parvula HOM05D003203 ORTHO05D003526 9.4e-142 507.7 377 65.3
Potri.016G083100 Populus trichocarpa HOM05D003203 ORTHO05D003526 5.4e-129 465.3 288 75.0
MD03G1112400 Malus domestica HOM05D003203 ORTHO05D003526 1.1e-116 424.5 253 81.4
Peaxi162Scf00389g00932 Petunia axillaris HOM05D003203 ORTHO05D003526 1.1e-116 424.5 268 75.4
Nn2g13009 Nelumbo nucifera HOM05D003203 ORTHO05D003526 2.0e-115 420.2 259 76.8
AagrBONN_evm.TU.Sc2ySwM_362.2654 Anthoceros agrestis HOM05D003203 ORTHO05D003526 2.2e-114 416.8 364 57.7
AagrBONN_evm.TU.Sc2ySwM_244.3 Anthoceros agrestis HOM05D003203 ORTHO05D003526 5.4e-113 412.1 407 53.6
AagrBONN_evm.TU.Sc2ySwM_341.2 Anthoceros agrestis HOM05D003203 ORTHO05D003526 5.4e-113 412.1 407 53.6
AagrBONN_evm.TU.Sc2ySwM_117.4029 Anthoceros agrestis HOM05D003203 ORTHO05D003526 1.2e-112 411.0 407 53.6
AagrBONN_evm.TU.Sc2ySwM_117.4033 Anthoceros agrestis HOM05D003203 ORTHO05D003526 1.2e-112 411.0 407 53.6
AagrBONN_evm.TU.Sc2ySwM_117.4034 Anthoceros agrestis HOM05D003203 ORTHO05D003526 1.2e-112 411.0 407 53.6
AagrBONN_evm.TU.Sc2ySwM_341.1 Anthoceros agrestis HOM05D003203 ORTHO05D003526 1.2e-112 411.0 407 53.6
arahy.Tifrunner.gnm1.ann1.VS5L85 Arachis hypogaea HOM05D003203 ORTHO05D003526 6.6e-111 405.2 402 56.0
Mapoly0005s0012 Marchantia polymorpha HOM05D003203 ORTHO05D003526 2.8e-109 399.8 426 48.4
AagrBONN_evm.TU.Sc2ySwM_117.4032 Anthoceros agrestis HOM05D003203 ORTHO05D003526 4.7e-109 399.1 383 54.6
vmacro14071 Vaccinium macrocarpon HOM05D003203 ORTHO05D003526 2.2e-106 390.2 301 63.1
Pp3c27_2850 Physcomitrium patens HOM05D003203 ORTHO05D003526 4.6e-104 382.5 378 52.1
SMO223G0015 Selaginella moellendorffii HOM05D003203 ORTHO05D003526 2.3e-103 380.2 372 54.3
CBR_g39406 Chara braunii HOM05D003203 ORTHO05D003526 8.9e-100 368.2 370 53.0
Hund28195 Selenicereus undatus HOM05D003203 ORTHO05D003526 1.2e-99 367.9 301 61.1
Hund28197 Selenicereus undatus HOM05D003203 ORTHO05D003526 1.2e-99 367.9 301 61.1
vmacro14465 Vaccinium macrocarpon HOM05D003203 ORTHO05D003526 3.1e-60 236.9 182 65.4
DCAR_024904 Daucus carota HOM05D003203 ORTHO05D003526 1.4e-55 221.5 177 65.5
RcHm_v2.0_Chr1g0326771 Rosa chinensis HOM05D003203 ORTHO05D003526 2.6e-51 207.2 134 73.9
DCAR_024905 Daucus carota HOM05D003203 ORTHO05D003526 8.5e-50 202.2 167 62.9
AagrBONN_evm.TU.Sc2ySwM_246.1 Anthoceros agrestis HOM05D003203 ORTHO05D003526 7.9e-48 195.7 219 46.6
TPR.G38674 Trifolium pratense HOM05D003203 ORTHO05D003526 1.8e-47 194.5 117 76.1
Gohir.A07G142600 Gossypium hirsutum HOM05D003203 ORTHO05D003526 1.5e-46 191.4 186 58.1
Ah.01g014960 Amaranthus hybridus HOM05D003203 ORTHO05D003526 3.7e-45 186.8 172 58.1
vmacro14466 Vaccinium macrocarpon HOM05D003203 ORTHO05D003526 1.8e-44 184.5 108 81.5
Lj3g0013082 Lotus japonicus HOM05D003203 ORTHO05D003526 3.1e-44 183.7 130 73.8
Lsat_1_v5_gn_4_85140 Lactuca sativa HOM05D003203 ORTHO05D003526 5.5e-41 172.9 209 44.5
Nitab4.5_0000848g0100 Nicotiana tabacum HOM05D003203 ORTHO05D003526 6.7e-39 166.0 209 45.0
Dinv24673 Davidia involucrata HOM05D003203 ORTHO05D003526 1.5e-38 164.9 101 77.2
AL7G46970 Arabidopsis lyrata HOM05D003203 ORTHO05D003526 9.7e-38 162.2 135 54.1
AagrBONN_evm.TU.Sc2ySwM_245.2 Anthoceros agrestis HOM05D003203 ORTHO05D003526 2.6e-35 154.1 192 44.3
vmacro14070 Vaccinium macrocarpon HOM05D003203 ORTHO05D003526 5.9e-35 152.9 166 52.4
CARHR007720 Cardamine hirsuta HOM05D003203 ORTHO05D003526 2.3e-31 141.0 113 55.8
Lsat_1_v5_gn_1_93381 Lactuca sativa HOM05D003203 ORTHO05D003526 1.3e-29 135.2 114 52.6
QL11p006401 Quercus lobata HOM05D003203 ORTHO05D003526 6.5e-26 122.9 121 54.5
Peaxi162Scf00389g00943 Petunia axillaris HOM05D003203 ORTHO05D003526 1.5e-25 121.7 111 60.4
QL11p006896 Quercus lobata HOM05D003203 ORTHO05D003526 1.2e-24 118.6 81 66.7
vmacro14464 Vaccinium macrocarpon HOM05D003203 ORTHO05D003526 1.2e-24 118.6 85 63.5
QL11p006907 Quercus lobata HOM05D003203 ORTHO05D003526 1.6e-24 118.2 79 69.6
TPR.G38645 Trifolium pratense HOM05D003203 ORTHO05D003526 3.0e-23 114.0 89 53.9
Nitab4.5_0004347g0030 Nicotiana tabacum HOM05D003203 ORTHO05D003526 2.4e-20 104.4 100 54.0
Lsat_1_v5_gn_1_45160 Lactuca sativa HOM05D003203 ORTHO05D003526 4.2e-17 93.6 117 49.6
Thhalv10023078m.g Eutrema salsugineum HOM05D003203 ORTHO05D003526 1.2e-16 92.0 143 38.5
Cre07.g352800 Chlamydomonas reinhardtii HOM05D003203 ORTHO05D003526 4.7e-16 90.1 275 28.0
RcHm_v2.0_Chr3g0490601 Rosa chinensis HOM05D003203 ORTHO05D003526 2.0e-14 84.7 112 43.8
Lsat_1_v5_gn_8_71460 Lactuca sativa HOM05D006073 ORTHO05D007354 4.4e-14 83.6 76 57.9
TPR.G2853 Trifolium pratense HOM05D003203 ORTHO05D003526 3.7e-13 80.5 79 60.8
Zm00001eb134270 Zea mays HOM05D003203 ORTHO05D003526 9.2e-12 75.9 49 73.5
TPR.G22000 Trifolium pratense HOM05D003203 ORTHO05D003526 2.7e-11 74.3 89 41.6
Lsat_1_v5_gn_2_120 Lactuca sativa HOM05D003203 ORTHO05D003526 2.9e-10 70.9 80 42.5
Lsat_1_v5_gn_6_107780 Lactuca sativa HOM05D004503 ORTHO05D003526 3.8e-10 70.5 61 50.8
Lsat_1_v5_gn_9_33601 Lactuca sativa HOM05D003172 ORTHO05D003526 4.4e-06 57.0 88 39.8
TPR.G33733 Trifolium pratense HOM05D003203 ORTHO05D003526 5.8e-06 56.6 32 78.1
Glyma.11G172800 Glycine max HOM05D003203 ORTHO05D003526 9.8e-06 55.8 94 37.2


User provided reference genes

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