Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy180s005 Aquilegia oxysepala HOM05D002341 ORTHO05D003165 1.3e-50 202.6 94 100.0
Aqoxy3G02657 Aquilegia oxysepala HOM05D002341 ORTHO05D003165 4.0e-47 191.0 88 100.0
SEGI_03160 Sequoiadendron giganteum HOM05D002341 ORTHO05D003165 8.7e-42 173.3 88 90.9
SEGI_15815 Sequoiadendron giganteum HOM05D002341 ORTHO05D003165 8.7e-42 173.3 88 90.9
Atru.chr1.2928 Acer truncatum HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Aqoxy3G03781 Aquilegia oxysepala HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
arahy.Tifrunner.gnm1.ann1.B7D93H Arachis hypogaea HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
arahy.Tifrunner.gnm1.ann1.DCJ864 Arachis hypogaea HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
MSTRG.4705 Avicennia marina HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
MSTRG.9422 Avicennia marina HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
CSS0044190 Camellia sinensis var. sinensis HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
CANSAT56G2164 Cannabis sativa HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Cfa001956 Carpinus fangiana HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
CiPaw.01G248600 Carya illinoinensis HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
ClCG09G002950 Citrullus lanatus HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Ciclev10024683m.g Citrus clementina HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Cc00_g08660 Coffea canephora HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Cc01_g01870 Coffea canephora HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
MELO3C023427.2 Cucumis melo HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
CsaV3_7G032320 Cucumis sativus L. HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Dinv30610 Davidia involucrata HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Duzib160G0553 Durio zibethinus HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Duzib235G1417 Durio zibethinus HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
ECA247G2936 Erigeron canadensis HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Migut.D01080 Erythranthe guttata HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Eucgr.F03879 Eucalyptus grandis HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Eucgr.F03935 Eucalyptus grandis HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
FvH4_6g29610 Fragaria vesca HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
FAN02G2239 Fragaria x ananassa HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
FAN05G4711 Fragaria x ananassa HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
FAN09G3038 Fragaria x ananassa HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
FAN14G4930 Fragaria x ananassa HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Glyma.13G366100 Glycine max HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Glyma.15G007100 Glycine max HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Gohir.A05G122750 Gossypium hirsutum HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Gohir.D05G123700 Gossypium hirsutum HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Gorai.009G127700 Gossypium raimondii HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Gorai.011G084400 Gossypium raimondii HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
HanXRQChr04g0097891 Helianthus annuus HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Hma1.2p1_0017F.1_g011180 Hydrangea macrophylla HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Lsat_1_v5_gn_1_34320 Lactuca sativa HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Lj9C499G5 Lonicera japonica HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Lj3g0016754 Lotus japonicus HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Lalb_Chr14g0373851 Lupinus albus HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Lalb_Chr24g0395471 Lupinus albus HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
MD00G1072300 Malus domestica HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
MD17G1212800 Malus domestica HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Manes.04G112400 Manihot esculenta HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Manes.11G057400 Manihot esculenta HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Nn2g12097 Nelumbo nucifera HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Nn8g39518 Nelumbo nucifera HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Oeu005942.1 Olea europaea HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Oeu045135.1 Olea europaea HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
PSO017G1385 Papaver somniferum HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
PSO170G3007 Papaver somniferum HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Phvul.005G178600 Phaseolus vulgaris HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Potri.003G031900 Populus trichocarpa HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Prupe.3G088200 Prunus persica HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
PGR102G3099 Punica granatum HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Rhsim08G0212600 Rhododendron simsii HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
RcHm_v2.0_Chr2g0135211 Rosa chinensis HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Sabra03G0018200 Salix brachista HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
SalBow6G3017 Salvia bowleyana HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
SalBow6G5900 Salvia bowleyana HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
SHI11229 Sapria himalayana HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Sed0003553 Sechium edule HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Sed0021407 Sechium edule HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
SMO145G0262 Selaginella moellendorffii HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
SGA_v2.0_scaffold26G11346 Striga asiatica HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
THA.LOC104800410 Tarenaya hassleriana HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
Thecc.06G025500 Theobroma cacao HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
TWI75G1620 Tripterygium wilfordii HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
TAR383G0801 Trochodendron aralioides HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
unitig_747.g21300 Utricularia gibba HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 92.0
vmacro19000 Vaccinium macrocarpon HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
VMungo1080G1733 Vigna mungo HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
GSVIVG01017346001 Vitis vinifera HOM05D002341 ORTHO05D003165 1.1e-41 172.9 88 90.9
ATR0800G142 Amborella trichopoda HOM05D002341 ORTHO05D003165 2.5e-41 171.8 88 89.8
CAN.G147.16 Capsicum annuum HOM05D002341 ORTHO05D003165 2.5e-41 171.8 88 90.9
DCAR_025515 Daucus carota HOM05D002341 ORTHO05D003165 2.5e-41 171.8 88 89.8
Dinv38126 Davidia involucrata HOM05D002341 ORTHO05D003165 2.5e-41 171.8 88 89.8
Nitab4.5_0000366g0200 Nicotiana tabacum HOM05D002341 ORTHO05D003165 2.5e-41 171.8 88 90.9
Nitab4.5_0002890g0050 Nicotiana tabacum HOM05D002341 ORTHO05D003165 2.5e-41 171.8 88 90.9
Nitab4.5_0007065g0030 Nicotiana tabacum HOM05D002341 ORTHO05D003165 2.5e-41 171.8 88 90.9
Peaxi162Scf00089g00635 Petunia axillaris HOM05D002341 ORTHO05D003165 2.5e-41 171.8 88 90.9
Peaxi162Scf01838g00019 Petunia axillaris HOM05D002341 ORTHO05D003165 2.5e-41 171.8 88 90.9
Pp3c24_20910 Physcomitrium patens HOM05D002341 ORTHO05D003165 2.5e-41 171.8 88 90.9
Pp3c8_25090 Physcomitrium patens HOM05D002341 ORTHO05D003165 2.5e-41 171.8 88 90.9
Solyc07g008880.3 Solanum lycopersicum HOM05D002341 ORTHO05D003165 2.5e-41 171.8 88 90.9
Sopen07g004810 Solanum pennellii HOM05D002341 ORTHO05D003165 2.5e-41 171.8 88 90.9
PGSC0003DMG400028736 Solanum tuberosum HOM05D002341 ORTHO05D003165 2.5e-41 171.8 88 90.9
THA.LOC104812513 Tarenaya hassleriana HOM05D002341 ORTHO05D003165 2.5e-41 171.8 88 89.8
TAR625G0212 Trochodendron aralioides HOM05D002341 ORTHO05D003165 2.5e-41 171.8 88 89.8
Ca_01053_v3 Cicer arietinum L. HOM05D002341 ORTHO05D003165 4.3e-41 171.0 88 90.9
Medtr2g103960 Medicago truncatula HOM05D002341 ORTHO05D003165 4.3e-41 171.0 88 90.9
Psat5g302520 Pisum sativum HOM05D002341 ORTHO05D003165 4.3e-41 171.0 88 90.9
TPR.G37161 Trifolium pratense HOM05D002341 ORTHO05D003165 4.3e-41 171.0 88 90.9
Actinidia15757 Actinidia chinensis HOM05D002341 ORTHO05D003165 5.6e-41 170.6 88 88.6
Aa31LG3G3350 Aethionema arabicum HOM05D002341 ORTHO05D003165 5.6e-41 170.6 88 89.8
AL2G41470 Arabidopsis lyrata HOM05D002341 ORTHO05D003165 5.6e-41 170.6 88 89.8
AT1G80070 Arabidopsis thaliana HOM05D002341 ORTHO05D003165 5.6e-41 170.6 88 89.8
BcaB06g28420 Brassica carinata HOM05D002341 ORTHO05D003165 5.6e-41 170.6 88 89.8
BcaB06g28506 Brassica carinata HOM05D002341 ORTHO05D003165 5.6e-41 170.6 88 89.8
BcaNung01746 Brassica carinata HOM05D002341 ORTHO05D003165 5.6e-41 170.6 88 89.8
A04p23900 Brassica napus HOM05D002341 ORTHO05D003165 5.6e-41 170.6 88 89.8
C04p60530 Brassica napus HOM05D002341 ORTHO05D003165 5.6e-41 170.6 88 89.8
BraA04t17913Z Brassica rapa HOM05D002341 ORTHO05D003165 5.6e-41 170.6 88 89.8
Carub.0002s2745 Capsella rubella HOM05D002341 ORTHO05D003165 5.6e-41 170.6 88 89.8
CARHR074430 Cardamine hirsuta HOM05D002341 ORTHO05D003165 5.6e-41 170.6 88 89.8
Thhalv10017992m.g Eutrema salsugineum HOM05D002341 ORTHO05D003165 5.6e-41 170.6 88 89.8
Sp5g35830 Schrenkiella parvula HOM05D002341 ORTHO05D003165 5.6e-41 170.6 88 89.8
CDE02G3147 Ceratophyllum demersum HOM05D002341 ORTHO05D003165 7.3e-41 170.2 88 89.8
CDE09G0407 Ceratophyllum demersum HOM05D002341 ORTHO05D003165 7.3e-41 170.2 88 89.8
CiPaw.02G157600 Carya illinoinensis HOM05D002341 ORTHO05D003165 1.3e-40 169.5 93 84.9
Hund00514 Selenicereus undatus HOM05D002341 ORTHO05D003165 1.3e-40 169.5 88 89.8
AagrBONN_evm.TU.Sc2ySwM_362.189 Anthoceros agrestis HOM05D002341 ORTHO05D003165 1.6e-40 169.1 88 88.6
BcaC09g51361 Brassica carinata HOM05D002341 ORTHO05D003165 1.6e-40 169.1 88 88.6
A01p11740 Brassica napus HOM05D002341 ORTHO05D003165 1.6e-40 169.1 88 88.6
C01p13930 Brassica napus HOM05D002341 ORTHO05D003165 1.6e-40 169.1 88 88.6
BolC1t01360H Brassica oleracea HOM05D002341 ORTHO05D003165 1.6e-40 169.1 88 88.6
BraA01t01116Z Brassica rapa HOM05D002341 ORTHO05D003165 1.6e-40 169.1 88 88.6
COL.COLO4_24410 Corchorus olitorius HOM05D002341 ORTHO05D003165 1.6e-40 169.1 88 88.6
Os05g0163250 Oryza sativa ssp. japonica HOM05D002341 ORTHO05D003165 1.6e-40 169.1 88 88.6
Sc10g0008090 Simmondsia chinensis HOM05D002341 ORTHO05D003165 1.6e-40 169.1 88 88.6
Zm00001eb271550 Zea mays HOM05D002341 ORTHO05D003165 1.6e-40 169.1 88 88.6
Zm00001eb375530 Zea mays HOM05D002341 ORTHO05D003165 1.6e-40 169.1 88 88.6
AUR62011512 Chenopodium quinoa HOM05D002341 ORTHO05D003165 2.1e-40 168.7 88 88.6
AUR62016331 Chenopodium quinoa HOM05D002341 ORTHO05D003165 2.1e-40 168.7 88 88.6
HanXRQChr02g0033481 Helianthus annuus HOM05D002341 ORTHO05D003165 2.1e-40 168.7 88 89.8
Mapoly0019s0008 Marchantia polymorpha HOM05D002341 ORTHO05D003165 2.1e-40 168.7 88 88.6
AL7G10650 Arabidopsis lyrata HOM05D002341 ORTHO05D003165 3.6e-40 167.9 88 88.6
Ah.01g020550 Amaranthus hybridus HOM05D002341 ORTHO05D003165 4.8e-40 167.5 88 88.6
EL10Ac9g21877 Beta vulgaris HOM05D002341 ORTHO05D003165 4.8e-40 167.5 88 87.5
AT4G38780 Arabidopsis thaliana HOM05D002341 ORTHO05D003165 3.1e-39 164.9 88 86.4
C04p08780 Brassica napus HOM05D002341 ORTHO05D003165 1.5e-38 162.5 89 86.5
BolC4t22470H Brassica oleracea HOM05D002341 ORTHO05D003165 1.5e-38 162.5 89 86.5
BcaC02g12021 Brassica carinata HOM05D002341 ORTHO05D003165 2.6e-38 161.8 89 86.5
BcaB02g09158 Brassica carinata HOM05D002341 ORTHO05D003165 4.5e-38 161.0 89 86.5
A05p07330 Brassica napus HOM05D002341 ORTHO05D003165 4.5e-38 161.0 89 85.4
BolC5t32699H Brassica oleracea HOM05D002341 ORTHO05D003165 4.5e-38 161.0 89 85.4
BraA05t19698Z Brassica rapa HOM05D002341 ORTHO05D003165 4.5e-38 161.0 89 85.4
Medtr8g011150 Medicago truncatula HOM05D002341 ORTHO05D003165 5.8e-38 160.6 88 85.2
TPR.G24585 Trifolium pratense HOM05D002341 ORTHO05D003165 9.9e-38 159.8 88 84.1
Thhalv10024184m.g Eutrema salsugineum HOM05D002341 ORTHO05D003165 1.7e-37 159.1 88 83.0
DCAR_022311 Daucus carota HOM05D002341 ORTHO05D003165 2.2e-37 158.7 88 83.0
QL05p031390 Quercus lobata HOM05D002341 ORTHO05D003165 6.4e-37 157.1 118 67.8
BolC4t27552H Brassica oleracea HOM05D002341 ORTHO05D003165 2.4e-36 155.2 117 67.5
MCO02G483 Micromonas commoda HOM05D002341 ORTHO05D003165 2.4e-36 155.2 88 80.7
BcaC05g27955 Brassica carinata HOM05D002341 ORTHO05D003165 3.2e-36 154.8 89 82.0
C05p39590 Brassica napus HOM05D002341 ORTHO05D003165 3.2e-36 154.8 89 82.0
Haze_16566 Corylus avellana HOM05D002341 ORTHO05D003165 5.4e-36 154.1 126 63.5
AL7G40190 Arabidopsis lyrata HOM05D002341 ORTHO05D003165 9.3e-36 153.3 88 83.0
CBR_g48660 Chara braunii HOM05D002341 ORTHO05D003165 1.2e-35 152.9 89 77.5
Prupe.3G223400 Prunus persica HOM05D002341 ORTHO05D003165 6.0e-35 150.6 79 87.3
RcHm_v2.0_Chr2g0160631 Rosa chinensis HOM05D002341 ORTHO05D003165 1.0e-34 149.8 88 75.0
PRCOL_00001855 Prasinoderma coloniale HOM05D002341 ORTHO05D003165 1.8e-34 149.1 89 78.7
HanXRQChr16g0508831 Helianthus annuus HOM05D002341 ORTHO05D003165 3.0e-34 148.3 88 79.5
FvH4_6g43880 Fragaria vesca HOM05D002341 ORTHO05D003165 8.7e-34 146.7 89 74.2
FAN05G2070 Fragaria x ananassa HOM05D002341 ORTHO05D003165 1.1e-33 146.4 89 74.2
Cre01.g016050 Chlamydomonas reinhardtii HOM05D002341 ORTHO05D003165 2.5e-33 145.2 88 72.7
SGA_v2.0_scaffold332G48967 Striga asiatica HOM05D002341 ORTHO05D003165 5.6e-33 144.1 88 76.1
Haze_26409 Corylus avellana HOM05D002341 ORTHO05D003165 1.8e-31 139.0 88 71.6
ECA246G5065 Erigeron canadensis HOM05D002341 ORTHO05D003165 1.7e-29 132.5 70 84.3
Nitab4.5_0001200g0150 Nicotiana tabacum HOM05D002341 ORTHO05D003165 2.9e-29 131.7 81 80.2
Cfa023699 Carpinus fangiana HOM05D002341 ORTHO05D003165 1.0e-26 123.2 89 60.7
COL.COLO4_11940 Corchorus olitorius HOM05D002341 ORTHO05D003165 1.8e-23 112.5 88 67.0
vmacro22816 Vaccinium macrocarpon HOM05D002341 ORTHO05D012275 1.9e-17 92.4 52 78.8
FAN09G0817 Fragaria x ananassa HOM05D002341 ORTHO05D003165 2.8e-16 88.6 59 66.1
vmacro12874 Vaccinium macrocarpon HOM05D002341 ORTHO05D015231 6.3e-16 87.4 58 69.0
Gohir.A10G073101 Gossypium hirsutum HOM05D002341 ORTHO05D003165 7.7e-14 80.5 36 97.2
Gohir.D10G077825 Gossypium hirsutum HOM05D002341 ORTHO05D003165 7.7e-14 80.5 36 97.2
Cpa.g.sc67.48 Carica papaya HOM05D002341 ORTHO05D003165 3.2e-12 75.1 41 80.5
Carub.0007s2658 Capsella rubella HOM05D002341 ORTHO05D017369 8.2e-08 60.5 33 78.8


User provided reference genes

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