Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy180s004 Aquilegia oxysepala HOM05D002341 ORTHO05D017369 3.4e-109 398.3 193 100.0
Aqoxy3G02657 Aquilegia oxysepala HOM05D002341 ORTHO05D003165 1.5e-101 372.9 179 100.0
HanXRQChr04g0097891 Helianthus annuus HOM05D002341 ORTHO05D003165 1.8e-86 322.8 175 86.9
SEGI_03160 Sequoiadendron giganteum HOM05D002341 ORTHO05D003165 1.8e-86 322.8 175 86.3
PSO017G1385 Papaver somniferum HOM05D002341 ORTHO05D003165 2.4e-86 322.4 175 84.6
CARHR074430 Cardamine hirsuta HOM05D002341 ORTHO05D003165 3.1e-86 322.0 175 86.3
Eucgr.F03879 Eucalyptus grandis HOM05D002341 ORTHO05D003165 3.1e-86 322.0 175 86.3
Sc10g0008090 Simmondsia chinensis HOM05D002341 ORTHO05D003165 3.1e-86 322.0 175 85.7
Cc01_g01870 Coffea canephora HOM05D002341 ORTHO05D003165 4.0e-86 321.6 175 86.3
Thhalv10017992m.g Eutrema salsugineum HOM05D002341 ORTHO05D003165 4.0e-86 321.6 175 86.3
Gorai.011G084400 Gossypium raimondii HOM05D002341 ORTHO05D003165 4.0e-86 321.6 175 85.7
Nn2g12097 Nelumbo nucifera HOM05D002341 ORTHO05D003165 4.0e-86 321.6 175 86.3
PSO170G3007 Papaver somniferum HOM05D002341 ORTHO05D003165 4.0e-86 321.6 175 84.6
Sp5g35830 Schrenkiella parvula HOM05D002341 ORTHO05D003165 4.0e-86 321.6 175 86.3
Duzib160G0553 Durio zibethinus HOM05D002341 ORTHO05D003165 5.3e-86 321.2 176 84.7
Duzib235G1417 Durio zibethinus HOM05D002341 ORTHO05D003165 5.3e-86 321.2 176 84.7
Hund00514 Selenicereus undatus HOM05D002341 ORTHO05D003165 6.9e-86 320.9 179 83.8
Thecc.06G025500 Theobroma cacao HOM05D002341 ORTHO05D003165 6.9e-86 320.9 175 85.1
GSVIVG01017346001 Vitis vinifera HOM05D002341 ORTHO05D003165 6.9e-86 320.9 175 85.1
Ah.01g020550 Amaranthus hybridus HOM05D002341 ORTHO05D003165 9.0e-86 320.5 175 85.7
EL10Ac9g21877 Beta vulgaris HOM05D002341 ORTHO05D003165 9.0e-86 320.5 175 85.7
Cpa.g.sc67.48 Carica papaya HOM05D002341 ORTHO05D003165 9.0e-86 320.5 175 85.1
THA.LOC104812513 Tarenaya hassleriana HOM05D002341 ORTHO05D003165 9.0e-86 320.5 176 85.2
AL2G41470 Arabidopsis lyrata HOM05D002341 ORTHO05D003165 1.2e-85 320.1 175 85.7
AT1G80070 Arabidopsis thaliana HOM05D002341 ORTHO05D003165 1.2e-85 320.1 175 85.7
BcaB06g28420 Brassica carinata HOM05D002341 ORTHO05D003165 1.2e-85 320.1 175 85.7
BcaB06g28506 Brassica carinata HOM05D002341 ORTHO05D003165 1.2e-85 320.1 175 85.7
BcaC09g51361 Brassica carinata HOM05D002341 ORTHO05D003165 1.2e-85 320.1 175 85.7
BcaNung01746 Brassica carinata HOM05D002341 ORTHO05D003165 1.2e-85 320.1 175 85.7
C01p13930 Brassica napus HOM05D002341 ORTHO05D003165 1.2e-85 320.1 175 85.7
C04p60530 Brassica napus HOM05D002341 ORTHO05D003165 1.2e-85 320.1 175 85.7
BolC1t01360H Brassica oleracea HOM05D002341 ORTHO05D003165 1.2e-85 320.1 175 85.7
BolC4t27552H Brassica oleracea HOM05D002341 ORTHO05D003165 1.2e-85 320.1 175 85.7
Carub.0002s2745 Capsella rubella HOM05D002341 ORTHO05D003165 1.2e-85 320.1 175 85.7
CDE02G3147 Ceratophyllum demersum HOM05D002341 ORTHO05D003165 1.2e-85 320.1 175 85.1
Gorai.009G127700 Gossypium raimondii HOM05D002341 ORTHO05D003165 1.2e-85 320.1 175 85.1
Lsat_1_v5_gn_1_34320 Lactuca sativa HOM05D002341 ORTHO05D003165 1.2e-85 320.1 175 85.7
TAR625G0212 Trochodendron aralioides HOM05D002341 ORTHO05D003165 1.2e-85 320.1 175 84.0
A04p23900 Brassica napus HOM05D002341 ORTHO05D003165 1.5e-85 319.7 172 86.6
BraA04t17913Z Brassica rapa HOM05D002341 ORTHO05D003165 1.5e-85 319.7 172 86.6
CSS0044190 Camellia sinensis var. sinensis HOM05D002341 ORTHO05D003165 1.5e-85 319.7 176 84.7
Cc00_g08660 Coffea canephora HOM05D002341 ORTHO05D003165 1.5e-85 319.7 175 85.7
Dinv38126 Davidia involucrata HOM05D002341 ORTHO05D003165 1.5e-85 319.7 176 84.7
ECA247G2936 Erigeron canadensis HOM05D002341 ORTHO05D003165 1.5e-85 319.7 175 85.7
THA.LOC104800410 Tarenaya hassleriana HOM05D002341 ORTHO05D003165 1.5e-85 319.7 175 85.1
ATR0800G142 Amborella trichopoda HOM05D002341 ORTHO05D003165 2.0e-85 319.3 176 84.1
CAN.G147.16 Capsicum annuum HOM05D002341 ORTHO05D003165 2.0e-85 319.3 175 85.1
Ciclev10024683m.g Citrus clementina HOM05D002341 ORTHO05D003165 2.0e-85 319.3 175 85.1
Nitab4.5_0007065g0030 Nicotiana tabacum HOM05D002341 ORTHO05D003165 2.0e-85 319.3 175 85.1
Solyc07g008880.3 Solanum lycopersicum HOM05D002341 ORTHO05D003165 2.0e-85 319.3 175 85.1
Sopen07g004810 Solanum pennellii HOM05D002341 ORTHO05D003165 2.0e-85 319.3 175 85.1
PGSC0003DMG400028736 Solanum tuberosum HOM05D002341 ORTHO05D003165 2.0e-85 319.3 175 85.1
Atru.chr1.2928 Acer truncatum HOM05D002341 ORTHO05D003165 2.6e-85 318.9 175 84.6
Aqoxy3G03781 Aquilegia oxysepala HOM05D002341 ORTHO05D003165 2.6e-85 318.9 175 84.6
CDE09G0407 Ceratophyllum demersum HOM05D002341 ORTHO05D003165 2.6e-85 318.9 175 84.6
AUR62011512 Chenopodium quinoa HOM05D002341 ORTHO05D003165 2.6e-85 318.9 175 85.1
Nn8g39518 Nelumbo nucifera HOM05D002341 ORTHO05D003165 2.6e-85 318.9 175 85.7
Hma1.2p1_0017F.1_g011180 Hydrangea macrophylla HOM05D002341 ORTHO05D003165 3.4e-85 318.5 175 84.6
Nitab4.5_0000366g0200 Nicotiana tabacum HOM05D002341 ORTHO05D003165 3.4e-85 318.5 175 84.6
Nitab4.5_0002890g0050 Nicotiana tabacum HOM05D002341 ORTHO05D003165 3.4e-85 318.5 175 84.6
TWI75G1620 Tripterygium wilfordii HOM05D002341 ORTHO05D003165 5.8e-85 317.8 175 84.0
SGA_v2.0_scaffold26G11346 Striga asiatica HOM05D002341 ORTHO05D003165 7.6e-85 317.4 179 82.7
FvH4_6g29610 Fragaria vesca HOM05D002341 ORTHO05D003165 1.0e-84 317.0 175 84.6
FAN02G2239 Fragaria x ananassa HOM05D002341 ORTHO05D003165 1.0e-84 317.0 175 84.6
FAN05G4711 Fragaria x ananassa HOM05D002341 ORTHO05D003165 1.0e-84 317.0 175 84.6
FAN09G3038 Fragaria x ananassa HOM05D002341 ORTHO05D003165 1.0e-84 317.0 175 84.6
FAN14G4930 Fragaria x ananassa HOM05D002341 ORTHO05D003165 1.0e-84 317.0 175 84.6
Peaxi162Scf01838g00019 Petunia axillaris HOM05D002341 ORTHO05D003165 1.0e-84 317.0 175 83.4
MSTRG.4705 Avicennia marina HOM05D002341 ORTHO05D003165 1.3e-84 316.6 179 82.1
MSTRG.9422 Avicennia marina HOM05D002341 ORTHO05D003165 1.3e-84 316.6 179 82.7
Eucgr.F03935 Eucalyptus grandis HOM05D002341 ORTHO05D003165 1.3e-84 316.6 175 85.1
DCAR_025515 Daucus carota HOM05D002341 ORTHO05D003165 1.7e-84 316.2 175 84.0
Peaxi162Scf00089g00635 Petunia axillaris HOM05D002341 ORTHO05D003165 1.7e-84 316.2 175 84.0
Potri.003G031900 Populus trichocarpa HOM05D002341 ORTHO05D003165 1.7e-84 316.2 175 84.0
Sabra03G0018200 Salix brachista HOM05D002341 ORTHO05D003165 1.7e-84 316.2 175 84.0
SalBow6G3017 Salvia bowleyana HOM05D002341 ORTHO05D003165 1.7e-84 316.2 179 82.1
SalBow6G5900 Salvia bowleyana HOM05D002341 ORTHO05D003165 1.7e-84 316.2 179 82.1
CANSAT56G2164 Cannabis sativa HOM05D002341 ORTHO05D003165 2.2e-84 315.8 175 84.0
RcHm_v2.0_Chr2g0135211 Rosa chinensis HOM05D002341 ORTHO05D003165 2.2e-84 315.8 175 84.0
A01p11740 Brassica napus HOM05D002341 ORTHO05D003165 2.9e-84 315.5 176 85.2
BraA01t01116Z Brassica rapa HOM05D002341 ORTHO05D003165 2.9e-84 315.5 176 85.2
COL.COLO4_24410 Corchorus olitorius HOM05D002341 ORTHO05D003165 2.9e-84 315.5 172 84.3
Glyma.15G007100 Glycine max HOM05D002341 ORTHO05D003165 2.9e-84 315.5 175 84.0
Manes.11G057400 Manihot esculenta HOM05D002341 ORTHO05D003165 2.9e-84 315.5 175 83.4
Phvul.005G178600 Phaseolus vulgaris HOM05D002341 ORTHO05D003165 2.9e-84 315.5 175 84.0
QL05p031390 Quercus lobata HOM05D002341 ORTHO05D003165 2.9e-84 315.5 175 84.0
VMungo1080G1733 Vigna mungo HOM05D002341 ORTHO05D003165 2.9e-84 315.5 175 84.0
Migut.D01080 Erythranthe guttata HOM05D002341 ORTHO05D003165 3.8e-84 315.1 179 81.6
Dinv30610 Davidia involucrata HOM05D002341 ORTHO05D003165 4.9e-84 314.7 177 84.2
MD00G1072300 Malus domestica HOM05D002341 ORTHO05D003165 4.9e-84 314.7 175 84.0
Cfa001956 Carpinus fangiana HOM05D002341 ORTHO05D003165 6.5e-84 314.3 175 82.9
ClCG09G002950 Citrullus lanatus HOM05D002341 ORTHO05D003165 6.5e-84 314.3 175 84.6
Haze_16566 Corylus avellana HOM05D002341 ORTHO05D003165 6.5e-84 314.3 175 82.9
MELO3C023427.2 Cucumis melo HOM05D002341 ORTHO05D003165 6.5e-84 314.3 175 84.6
CsaV3_7G032320 Cucumis sativus L. HOM05D002341 ORTHO05D003165 6.5e-84 314.3 175 84.6
Glyma.13G366100 Glycine max HOM05D002341 ORTHO05D003165 6.5e-84 314.3 172 84.3
Prupe.3G088200 Prunus persica HOM05D002341 ORTHO05D003165 6.5e-84 314.3 175 84.0
Sed0003553 Sechium edule HOM05D002341 ORTHO05D003165 6.5e-84 314.3 175 84.6
Manes.04G112400 Manihot esculenta HOM05D002341 ORTHO05D003165 8.4e-84 313.9 175 82.9
CiPaw.01G248600 Carya illinoinensis HOM05D002341 ORTHO05D003165 1.1e-83 313.5 175 82.9
Lj3g0016754 Lotus japonicus HOM05D002341 ORTHO05D003165 1.1e-83 313.5 172 83.7
MD17G1212800 Malus domestica HOM05D002341 ORTHO05D003165 1.4e-83 313.2 175 83.4
Mapoly0019s0008 Marchantia polymorpha HOM05D002341 ORTHO05D003165 1.4e-83 313.2 176 82.4
Sed0021407 Sechium edule HOM05D002341 ORTHO05D003165 1.4e-83 313.2 175 84.0
unitig_747.g21300 Utricularia gibba HOM05D002341 ORTHO05D003165 1.4e-83 313.2 179 81.6
Actinidia15757 Actinidia chinensis HOM05D002341 ORTHO05D003165 1.9e-83 312.8 176 83.0
Ca_01053_v3 Cicer arietinum L. HOM05D002341 ORTHO05D003165 1.9e-83 312.8 175 82.9
Medtr2g103960 Medicago truncatula HOM05D002341 ORTHO05D003165 1.9e-83 312.8 175 82.9
Pp3c24_20910 Physcomitrium patens HOM05D002341 ORTHO05D003165 1.9e-83 312.8 175 83.4
Psat5g302520 Pisum sativum HOM05D002341 ORTHO05D003165 1.9e-83 312.8 175 82.9
vmacro19000 Vaccinium macrocarpon HOM05D002341 ORTHO05D003165 1.9e-83 312.8 176 83.5
Oeu045135.1 Olea europaea HOM05D002341 ORTHO05D003165 2.5e-83 312.4 175 82.3
Aa31LG3G3350 Aethionema arabicum HOM05D002341 ORTHO05D003165 3.2e-83 312.0 188 80.3
Oeu005942.1 Olea europaea HOM05D002341 ORTHO05D003165 3.2e-83 312.0 175 81.7
HanXRQChr02g0033481 Helianthus annuus HOM05D002341 ORTHO05D003165 4.2e-83 311.6 172 83.1
Lalb_Chr14g0373851 Lupinus albus HOM05D002341 ORTHO05D003165 4.2e-83 311.6 175 82.3
Lalb_Chr24g0395471 Lupinus albus HOM05D002341 ORTHO05D003165 4.2e-83 311.6 172 83.1
PGR102G3099 Punica granatum HOM05D002341 ORTHO05D003165 4.2e-83 311.6 175 84.0
AagrBONN_evm.TU.Sc2ySwM_362.189 Anthoceros agrestis HOM05D002341 ORTHO05D003165 5.5e-83 311.2 175 82.3
COL.COLO4_11940 Corchorus olitorius HOM05D002341 ORTHO05D003165 1.2e-82 310.1 175 83.4
Pp3c8_25090 Physcomitrium patens HOM05D002341 ORTHO05D003165 2.7e-82 308.9 175 81.7
Rhsim08G0212600 Rhododendron simsii HOM05D002341 ORTHO05D003165 2.7e-82 308.9 176 81.8
SMO145G0262 Selaginella moellendorffii HOM05D002341 ORTHO05D003165 2.7e-82 308.9 199 74.9
arahy.Tifrunner.gnm1.ann1.B7D93H Arachis hypogaea HOM05D002341 ORTHO05D003165 3.5e-82 308.5 177 81.9
arahy.Tifrunner.gnm1.ann1.DCJ864 Arachis hypogaea HOM05D002341 ORTHO05D003165 3.5e-82 308.5 177 81.9
Os05g0163250 Oryza sativa ssp. japonica HOM05D002341 ORTHO05D003165 3.5e-82 308.5 176 82.4
BcaB02g09158 Brassica carinata HOM05D002341 ORTHO05D003165 4.6e-82 308.1 173 83.8
Zm00001eb375530 Zea mays HOM05D002341 ORTHO05D003165 4.6e-82 308.1 176 81.8
Zm00001eb271550 Zea mays HOM05D002341 ORTHO05D003165 7.9e-82 307.4 178 80.9
Thhalv10024184m.g Eutrema salsugineum HOM05D002341 ORTHO05D003165 2.3e-81 305.8 172 83.1
BraA05t19698Z Brassica rapa HOM05D002341 ORTHO05D003165 6.7e-81 304.3 174 82.8
AUR62016331 Chenopodium quinoa HOM05D002341 ORTHO05D003165 8.7e-81 303.9 164 86.0
A05p07330 Brassica napus HOM05D002341 ORTHO05D003165 1.9e-80 302.8 174 82.2
BcaC02g12021 Brassica carinata HOM05D002341 ORTHO05D003165 7.4e-80 300.8 173 82.7
CBR_g48660 Chara braunii HOM05D002341 ORTHO05D003165 7.4e-80 300.8 176 78.4
Cre01.g016050 Chlamydomonas reinhardtii HOM05D002341 ORTHO05D003165 1.6e-79 299.7 175 77.1
C05p39590 Brassica napus HOM05D002341 ORTHO05D003165 1.1e-78 297.0 184 77.2
C04p08780 Brassica napus HOM05D002341 ORTHO05D003165 1.4e-78 296.6 173 82.1
BolC4t22470H Brassica oleracea HOM05D002341 ORTHO05D003165 1.4e-78 296.6 173 82.1
TPR.G24585 Trifolium pratense HOM05D002341 ORTHO05D003165 2.0e-77 292.7 175 78.3
SHI11229 Sapria himalayana HOM05D002341 ORTHO05D003165 2.6e-77 292.4 194 72.7
ECA246G5065 Erigeron canadensis HOM05D002341 ORTHO05D003165 3.4e-77 292.0 172 79.1
RcHm_v2.0_Chr2g0160631 Rosa chinensis HOM05D002341 ORTHO05D003165 4.5e-77 291.6 172 76.2
MCO02G483 Micromonas commoda HOM05D002341 ORTHO05D003165 2.5e-75 285.8 175 75.4
DCAR_022311 Daucus carota HOM05D002341 ORTHO05D003165 3.2e-75 285.4 176 72.2
Medtr8g011150 Medicago truncatula HOM05D002341 ORTHO05D003165 1.8e-73 279.6 175 74.9
PRCOL_00001855 Prasinoderma coloniale HOM05D002341 ORTHO05D003165 1.3e-71 273.5 182 70.9
FvH4_6g43880 Fragaria vesca HOM05D002341 ORTHO05D003165 1.7e-71 273.1 177 72.3
FAN14G1989 Fragaria x ananassa HOM05D002341 ORTHO05D003165 2.4e-70 269.2 177 71.8
Haze_26409 Corylus avellana HOM05D002341 ORTHO05D003165 2.2e-68 262.7 172 70.9
SEGI_15815 Sequoiadendron giganteum HOM05D002341 ORTHO05D003165 8.8e-65 250.8 129 89.1
AT4G38780 Arabidopsis thaliana HOM05D002341 ORTHO05D003165 2.6e-64 249.2 175 70.3
Prupe.3G223400 Prunus persica HOM05D002341 ORTHO05D003165 7.4e-64 247.7 176 69.3
Lj9C499G5 Lonicera japonica HOM05D002341 ORTHO05D003165 1.4e-62 243.4 175 69.1
Cfa023699 Carpinus fangiana HOM05D002341 ORTHO05D003165 4.1e-62 241.9 170 63.5
Nitab4.5_0001200g0150 Nicotiana tabacum HOM05D002341 ORTHO05D003165 1.0e-60 237.3 125 86.4
TPR.G37161 Trifolium pratense HOM05D002341 ORTHO05D003165 1.7e-60 236.5 125 85.6
BcaC05g27955 Brassica carinata HOM05D002341 ORTHO05D003165 1.5e-59 233.4 124 86.3
AL7G10650 Arabidopsis lyrata HOM05D002341 ORTHO05D003165 3.9e-57 225.3 175 64.6
FAN02G2298 Fragaria x ananassa HOM05D002341 ORTHO05D003165 4.5e-53 211.8 182 58.8
C05p39580 Brassica napus HOM05D002341 ORTHO05D020177 7.7e-53 211.1 123 78.0
FAN09G0817 Fragaria x ananassa HOM05D002341 ORTHO05D003165 5.2e-49 198.4 173 56.6
TAR383G0801 Trochodendron aralioides HOM05D002341 ORTHO05D003165 2.2e-47 193.0 95 92.6
SGA_v2.0_scaffold332G48967 Striga asiatica HOM05D002341 ORTHO05D003165 4.0e-33 145.6 119 58.8
FAN05G3102 Fragaria x ananassa HOM05D002341 ORTHO05D020177 1.4e-30 137.1 92 63.0
TAR383G0612 Trochodendron aralioides HOM05D002341 ORTHO05D020177 1.2e-24 117.5 72 72.2
AagrBONN_evm.TU.Sc2ySwM_228.1410 Anthoceros agrestis HOM05D002341 ORTHO05D003165 2.6e-24 116.3 109 55.0
Gohir.D05G123700 Gossypium hirsutum HOM05D002341 ORTHO05D003165 2.0e-21 106.7 54 94.4
HanXRQChr16g0508831 Helianthus annuus HOM05D002341 ORTHO05D003165 1.1e-19 100.9 54 85.2
Carub.0007s2658 Capsella rubella HOM05D002341 ORTHO05D017369 6.2e-18 95.1 90 54.4
C08p06150 Brassica napus HOM05D002341 ORTHO05D017369 2.4e-14 83.2 60 68.3
BolC8t47393H Brassica oleracea HOM05D002341 ORTHO05D017369 4.1e-14 82.4 61 67.2
BolC8t47394H Brassica oleracea HOM05D002341 ORTHO05D017369 2.3e-12 76.6 57 66.7
Gohir.D10G077850 Gossypium hirsutum HOM05D002341 ORTHO05D020177 3.9e-12 75.9 46 78.3
CAN.G366.3 Capsicum annuum HOM05D001717 ORTHO05D022168 2.5e-11 73.2 77 50.6
CAN.G2186.1 Capsicum annuum HOM05D002341 ORTHO05D020177 7.3e-11 71.6 46 73.9
CAN.G32.13 Capsicum annuum HOM05D002341 ORTHO05D020177 7.3e-11 71.6 46 73.9
MD09G1102400 Malus domestica HOM05D002341 ORTHO05D017369 6.2e-10 68.6 39 79.5


User provided reference genes

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