Integrative Orthology Viewer: PT06G11600 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT06G11600 | 1 | |
Anchor point | PT08G02590 PT10G23440 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | PT06G11600 PT08G02590 PT10G23440 | 3 | ||
Tree-based ortholog | PT06G11600 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Arabidopsis thaliana | Anchor point | many-to-1 | AT2G36490 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G36490 | 1 | ||
Tree-based ortholog | 1-to-many | AT4G34060 AT3G10010 AT2G36490 | 3 | ||
Brachypodium distachyon | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BD4G08870 | 1 | |
Tree-based ortholog | 1-to-1 | BD3G43720 | 1 | ||
Carica papaya | Anchor point | many-to-1 | CP00005G00770 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00128G00520 | 1 | ||
Tree-based ortholog | 1-to-1 | CP00128G00520 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR07G10130 | 1 | |
Tree-based ortholog | 1-to-1 | CR07G10130 | 1 | ||
Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HV42300G00010 | 1 | |
Tree-based ortholog | 1-to-many | HV42300G00010 HV2548316G00010 HV1561680G00010 | 3 | ||
Musa acuminata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | MA10G15850 MA10G11410 | 2 | |
Tree-based ortholog | 1-to-1 | MA10G11410 | 1 | ||
Oryza sativa ssp. indica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OSINDICA_01G10950 | 1 | |
Tree-based ortholog | 1-to-1 | OSINDICA_04G20860 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS01G11900 | 1 | |
Tree-based ortholog | 1-to-1 | OS04G28860 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL05G01390 | 1 | |
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00480G00030 PP00226G00120 | 2 | |
Tree-based ortholog | 1-to-many | PP00226G00120 PP00480G00030 | 2 | ||
Setaria italica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SI001G17570 | 1 | |
Tree-based ortholog | 1-to-1 | SI001G17610 | 1 | ||
Solanum lycopersicum | Anchor point | many-to-many | SL11G007580 SL09G009080 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL11G007580 | 1 | ||
Tree-based ortholog | 1-to-many | SL10G083630 SL09G009080 | 2 | ||
Sorghum bicolor | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SB08G008620 SB04G019820 | 2 | |
Tree-based ortholog | 1-to-many | SB09G021920 SB08G008620 | 2 | ||
Vitis vinifera | Anchor point | many-to-many | VV13G11790 VV08G11460 VV06G08340 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV13G11790 VV08G11460 | 2 | ||
Tree-based ortholog | 1-to-1 | VV08G11460 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM05G28460 | 1 | |
Tree-based ortholog | 1-to-1 | ZM05G28500 | 1 |