Gene: SL10G083630 (Solanum lycopersicum)

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Gene Identifier
SL10G083630
Transcript Identifier
SL10G083630.1
Gene Type
Coding gene
Location
ch10 : 62731863-62741419 : negative

Family

Gene family
HOM03M001003
(72 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Repressor of silencing 2b (AHRD V1 **-- A4PF90_TOBAC)%3B contains Interpro domain(s) IPR003265 HhH-GPD domain
Description (AnnoMine)
DEMETER-like protein 2

Identifiers

Identifier Name
pidSolyc10g083630.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006281IEAInterProDNA repair
GO:0006284IEAInterProbase-excision repair
GO:0080111ISOPLAZA Integrative OrthologyDNA demethylationAT2G36490
GO:0031936ISOPLAZA Integrative Orthologynegative regulation of chromatin silencingAT2G36490
GO:0006306ISOPLAZA Integrative OrthologyDNA methylationAT2G36490
GO:0006342ISOPLAZA Integrative Orthologychromatin silencingAT2G36490

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0051539IEAInterPro4 iron, 4 sulfur cluster binding
GO:0003824IEAInterProcatalytic activity
GO:0003906ISOPLAZA Integrative OrthologyDNA-(apurinic or apyrimidinic site) lyase activityAT2G36490
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT2G36490
GO:0019104ISOPLAZA Integrative OrthologyDNA N-glycosylase activityAT2G36490

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT2G36490

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003265HhH-GPD domain
IPR011257DNA glycosylase
IPR023170Helix-turn-helix, base-excision DNA repair, C-terminal
IPR003651Endonuclease III-like, iron-sulphur cluster loop motif

Mapman id Description
28.2DNA.repair
No SignalP domains detected for this gene.