Gene: HV1561680G00010 (Hordeum vulgare)

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Gene Identifier
HV1561680G00010
Transcript Identifier
HV1561680G00010.1
Gene Type
Coding gene
Location
contig_1561680 : 1341-12890 : negative

Family

Gene family
HOM03M001003
(72 genes in 16 species)
specific family

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Descriptions

Description
5-methylcytosine DNA glycosylase
Description (AnnoMine)
DEMETER-like protein 2

Identifiers

Identifier Name
GeneNameMLOC_11707
pidMLOC_11707.1
idMLOC_11707.1
tidMLOC_11707.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006281IEAInterProDNA repair
GO:0006284IEAInterProbase-excision repair
GO:0006306ISOPLAZA Integrative OrthologyDNA methylationAT5G04560 AT2G36490
GO:0006349ISOPLAZA Integrative Orthologyregulation of gene expression by genetic imprintingAT5G04560
GO:0009793ISOPLAZA Integrative Orthologyembryo development ending in seed dormancyAT5G04560
GO:0010216ISOPLAZA Integrative Orthologymaintenance of DNA methylationAT4G34060
GO:0080111ISOPLAZA Integrative OrthologyDNA demethylationAT2G36490
GO:0031936ISOPLAZA Integrative Orthologynegative regulation of chromatin silencingAT2G36490
GO:0006342ISOPLAZA Integrative Orthologychromatin silencingAT2G36490

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0051539IEAInterPro4 iron, 4 sulfur cluster binding
GO:0003824IEAInterProcatalytic activity
GO:0019104ISOPLAZA Integrative OrthologyDNA N-glycosylase activityAT5G04560 AT4G34060 AT2G36490
GO:0003906ISOPLAZA Integrative OrthologyDNA-(apurinic or apyrimidinic site) lyase activityAT5G04560 AT2G36490
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT2G36490

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0043078ISOPLAZA Integrative Orthologypolar nucleusAT5G04560
GO:0005634ISOPLAZA Integrative OrthologynucleusAT2G36490

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003265HhH-GPD domain
IPR003651Endonuclease III-like, iron-sulphur cluster loop motif
IPR011257DNA glycosylase
IPR023170Helix-turn-helix, base-excision DNA repair, C-terminal

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.