Gene: AT4G34060 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT4G34060
Transcript Identifier
AT4G34060.1
Gene Type
Coding gene
Location
4 : 16314004-16319254 : positive

Family

Gene family
HOM03M001003
(72 genes in 16 species)
specific family
Subfamily
ORTHO03M005507
(6 genes in 5 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
demeter-like protein 3
Curated Summary
Encodes a protein with 5-meC and thymine-DNA glycosylase activity with a preference for CpG and CpHpG sequences. Involved in maintaining methylation marks.
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Identifiers

Identifier Name
aliasDML3
aliasdemeter-like protein 3
uniprotO49498

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010216IMPUniProtmaintenance of DNA methylation1 2 3
GO:0006284IEAUniProtbase-excision repair1 2
GO:0006355IEAUniProtregulation of transcription, DNA-dependent1 2
GO:0006351IEAUniProttranscription, DNA-templated1 2
GO:0006281IEAInterProDNA repair

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0019104IDAUniProtDNA N-glycosylase activity1 2 3
GO:0051539IEAUniProt4 iron, 4 sulfur cluster binding1 2
GO:0003677IEAUniProtDNA binding1 2
GO:0046872IEAUniProtmetal ion binding1 2
GO:0003824IEAInterProcatalytic activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISMUniProtnucleus1 2 3

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003265HhH-GPD domain
IPR023170Helix-turn-helix, base-excision DNA repair, C-terminal
IPR011257DNA glycosylase

Mapman id Description
28.2DNA.repair
No SignalP domains detected for this gene.