Functional clusters   top

Information

Type
GO term
Identifier
GO:0006629
Description
lipid metabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopodascaffold000011CH_atr_147560.0000687025
Amborella trichopodascaffold000161CH_atr_216580.000626899
Amborella trichopodascaffold001261CH_atr_529140.000000000699479
Amborella trichopodascaffold001262CH_atr_719140.0000000622403
Amborella trichopodascaffold001263CH_atr_5010100.00000000000219243
Amborella trichopodascaffold001264CH_atr_2710290.0000000783867
Amborella trichopodascaffold001265CH_atr_3211290.000000401509
Amborella trichopodascaffold001266CH_atr_3210100.00000000000219243
Arabidopsis lyratascaffold_11CH_aly_1686100.000104025
Arabidopsis lyratascaffold_11CH_aly_24111750.000994689
Arabidopsis lyratascaffold_14CH_aly_3713990.00022194
Arabidopsis lyratascaffold_65CH_aly_2011150.000000000219869
Arabidopsis lyratascaffold_66CH_aly_2012150.00000000000366567
Arabidopsis thaliana32CH_ath_8823610.00000000138125
Arabidopsis thaliana33CH_ath_10023610.00000000160199
Arabidopsis thaliana54CH_ath_2510100.00000000451769
Arabidopsis thaliana35CH_ath_3423610.00000000138125
Arabidopsis thaliana36CH_ath_3923610.00000000160199
Beta vulgarisBvchr7.sca0212CH_bvu_1318120.00000605754
Beta vulgarisBvchr7.sca0213CH_bvu_1039120.000000128866
Beta vulgarisBvchr7.sca0215CH_bvu_4310320.00042684
Beta vulgarisBvchr7.sca0216CH_bvu_2810180.000000693967
Brassica rapaA081CH_bra_53780.000000175574
Brassica rapaA084CH_bra_1712740.000300371
Brassica rapaA055CH_bra_2114440.0000013613
Brassica rapaA056CH_bra_2714440.00000276179
Capsella rubellascaffold_61CH_cru_199690.000303547
Capsella rubellascaffold_32CH_cru_16618730.00000406104
Capsella rubellascaffold_33CH_cru_20318730.00000617268
Capsella rubellascaffold_35CH_cru_4718730.00000406104
Capsella rubellascaffold_65CH_cru_1913170.0000000000154104
Capsella rubellascaffold_36CH_cru_6518730.00000617268
Capsella rubellascaffold_66CH_cru_2114170.000000000000243834
Carica papayasupercontig_1321CH_cpa_79690.0000210718
Carica papayasupercontig_511CH_cpa_182580.000928287
Carica papayasupercontig_1322CH_cpa_194690.000412331
Carica papayasupercontig_252CH_cpa_162550.000209123
Carica papayasupercontig_1323CH_cpa_2388180.0002245
Carica papayasupercontig_1124CH_cpa_910200.00000000214398
Citrullus lanatusChr11CH_cla_1048200.0000138696
Citrullus lanatusChr21CH_cla_14711640.000191132
Citrullus lanatusChr21CH_cla_81660.000000487585
Citrullus lanatusChr22CH_cla_9317740.00000109081
Citrullus lanatusChr23CH_cla_13017740.00000285565
Citrullus lanatusChr24CH_cla_31222930.000119738
Citrullus lanatusChr25CH_cla_22201000.000000327885
Citrullus lanatusChr26CH_cla_32201000.000000994491
Citrus sinensisscaffold000671CH_csi_947130.0000197558
Citrus sinensisscaffold000672CH_csi_2017130.000919212
Citrus sinensisscaffold003666CH_csi_2811270.0000082826
Cucumis meloCM3.5_scaffold000451CH_cme_6611330.0000000343136
Cucumis meloCM3.5_scaffold000452CH_cme_12011330.0000148038
Cucumis meloCM3.5_scaffold000453CH_cme_18711330.0000260846
Cucumis meloCM3.5_scaffold000454CH_cme_2111330.0000000343136
Cucumis meloCM3.5_scaffold000315CH_cme_2710240.00000689097
Cucumis meloCM3.5_scaffold000455CH_cme_2911330.0000148038
Cucumis meloCM3.5_scaffold000316CH_cme_4110240.0000116271
Cucumis meloCM3.5_scaffold000456CH_cme_4511330.0000260846
Eucalyptus grandisscaffold_61CH_egr_13311130.0000000000000642389
Eucalyptus grandisscaffold_61CH_egr_10111118.48854e-16
Eucalyptus grandisscaffold_62CH_egr_19511110.00000000000125496
Eucalyptus grandisscaffold_62CH_egr_25111130.0000000000922437
Eucalyptus grandisscaffold_63CH_egr_23011110.00000000000238635
Eucalyptus grandisscaffold_63CH_egr_16013130.00000000000000272554
Eucalyptus grandisscaffold_64CH_egr_8111118.48854e-16
Eucalyptus grandisscaffold_64CH_egr_10211130.0000000000000642389
Eucalyptus grandisscaffold_65CH_egr_13211130.0000000000922437
Eucalyptus grandisscaffold_65CH_egr_11611110.00000000000125496
Eucalyptus grandisscaffold_66CH_egr_13811110.00000000000238635
Eucalyptus grandisscaffold_66CH_egr_281292330.0000732304
Eucalyptus grandisscaffold_66CH_egr_11013130.00000000000000272554
Fragaria vescaLG11CH_fve_261580.00070999
Fragaria vescaLG21CH_fve_739180.0000000164244
Fragaria vescaLG61CH_fve_7013550.00000000909507
Fragaria vescascf05131601CH_fve_1115254.92682e-18
Fragaria vescaLG62CH_fve_17113550.000021564
Fragaria vescaLG63CH_fve_25413550.0000576213
Fragaria vescascf05131603CH_fve_1917273.57115e-16
Fragaria vescaLG24CH_fve_4910590.000171066
Fragaria vescaLG64CH_fve_2113550.00000000909507
Fragaria vescascf05131604CH_fve_1015254.92682e-18
Fragaria vescaLG25CH_fve_3811310.00000351834
Fragaria vescaLG65CH_fve_4413550.000021564
Fragaria vescaLG26CH_fve_3012190.000000000180386
Fragaria vescaLG66CH_fve_8013550.0000576213
Fragaria vescascf05131606CH_fve_1417273.57115e-16
Glycine maxGm141CH_gma_291550.000256841
Glycine maxGm151CH_gma_292550.000256841
Glycine maxGm171CH_gma_293550.000256841
Gossypium raimondiiChr092CH_gra_23515610.00011091
Gossypium raimondiiChr093CH_gra_275660.0000950236
Gossypium raimondiiChr093CH_gra_32115610.000164543
Gossypium raimondiiChr095CH_gra_7315610.00011091
Gossypium raimondiiChr096CH_gra_8715610.000164543
Malus domestica91CH_mdo_1726140.000193121
Malus domestica93CH_mdo_3077140.000316532
Malus domestica96CH_mdo_5510390.000390388
Malus domestica97CH_mdo_36140.0000501701
Malus domestica99CH_mdo_37140.0000447606
Medicago truncatulachr11CH_mtr_413570.0000811911
Medicago truncatulachr11CH_mtr_309690.00000289576
Medicago truncatulachr21CH_mtr_2967150.00000191302
Medicago truncatulachr21CH_mtr_1749210.00000000676813
Medicago truncatulachr31CH_mtr_320550.00000392494
Medicago truncatulachr71CH_mtr_3396100.00000718363
Medicago truncatulachr81CH_mtr_4046130.0000573547
Medicago truncatulachr12CH_mtr_3747110.00000524346
Medicago truncatulachr52CH_mtr_5208230.000105555
Medicago truncatulachr13CH_mtr_4937110.0000112789
Medicago truncatulachr23CH_mtr_4349210.00000276246
Medicago truncatulachr23CH_mtr_2898100.0000000280786
Medicago truncatulachr33CH_mtr_655550.000115792
Medicago truncatulachr43CH_mtr_6547140.000111934
Medicago truncatulachr53CH_mtr_7138230.000249007
Medicago truncatulachr73CH_mtr_4507100.00000416596
Medicago truncatulachr83CH_mtr_8187170.000605299
Medicago truncatulachr24CH_mtr_13210530.00000311231
Medicago truncatulachr25CH_mtr_16611530.0000435613
Medicago truncatulachr75CH_mtr_186212630.000145617
Medicago truncatulachr26CH_mtr_21711530.000136746
Medicago truncatulachr76CH_mtr_226222630.000189274
Oryza sativa ssp. japonica11CH_osa_6911220.0000000000117193
Oryza sativa ssp. japonica11CH_osa_7910180.0000000000677859
Oryza sativa ssp. japonica51CH_osa_385440.000886118
Oryza sativa ssp. japonica12CH_osa_8211220.000000000283857
Oryza sativa ssp. japonica12CH_osa_9810180.00000000123531
Oryza sativa ssp. japonica13CH_osa_12110180.00000000291237
Oryza sativa ssp. japonica13CH_osa_10311220.000000000727463
Oryza sativa ssp. japonica14CH_osa_4611220.0000000000117193
Oryza sativa ssp. japonica14CH_osa_5010180.0000000000677859
Oryza sativa ssp. japonica24CH_osa_113161840.0000222203
Oryza sativa ssp. japonica15CH_osa_5810180.00000000123531
Oryza sativa ssp. japonica15CH_osa_5411220.000000000283857
Oryza sativa ssp. japonica16CH_osa_6711220.000000000727463
Oryza sativa ssp. japonica16CH_osa_7210180.00000000291237
Oryza sativa ssp. japonica26CH_osa_111201840.00000200921
Populus trichocarpaChr141CH_ptr_1319120.000000009903
Populus trichocarpaChr141CH_ptr_244670.0000312809
Populus trichocarpaChr171CH_ptr_1059100.000000000468389
Populus trichocarpaChr191CH_ptr_10417600.000000000382067
Populus trichocarpascaffold_481CH_ptr_2577120.0000717594
Populus trichocarpaChr142CH_ptr_418670.000520732
Populus trichocarpaChr192CH_ptr_15719640.0000000173934
Populus trichocarpascaffold_482CH_ptr_2599150.0000137135
Populus trichocarpaChr143CH_ptr_531670.000714496
Populus trichocarpascaffold_483CH_ptr_3459150.0000218729
Populus trichocarpaChr144CH_ptr_9114680.0000095865
Populus trichocarpaChr174CH_ptr_6811260.000000129961
Populus trichocarpaChr194CH_ptr_55231210.00000000010468
Populus trichocarpaChr195CH_ptr_52412450.00000000000480363
Populus trichocarpaChr186CH_ptr_13110230.000145345
Populus trichocarpaChr196CH_ptr_58442450.000000000000175268
Prunus persicascaffold_11CH_ppe_83880.00000000023226
Prunus persicascaffold_11CH_ppe_1947110.00000417581
Prunus persicascaffold_31CH_ppe_14810260.000000284175
Prunus persicascaffold_31CH_ppe_4611140.000000000000410004
Prunus persicascaffold_41CH_ppe_2117120.00000987028
Prunus persicascaffold_41CH_ppe_170660.000000777312
Prunus persicascaffold_12CH_ppe_3127110.000138289
Prunus persicascaffold_32CH_ppe_9011140.000000000105509
Prunus persicascaffold_32CH_ppe_26710260.000038201
Prunus persicascaffold_42CH_ppe_245660.0000161305
Prunus persicascaffold_13CH_ppe_2628110.00000328893
Prunus persicascaffold_163CH_ppe_5098180.000719652
Prunus persicascaffold_33CH_ppe_26111260.00000309509
Prunus persicascaffold_43CH_ppe_2868120.0000095992
Prunus persicascaffold_43CH_ppe_310660.0000231919
Prunus persicascaffold_34CH_ppe_6710260.000000284175
Prunus persicascaffold_34CH_ppe_3611140.000000000000410004
Prunus persicascaffold_44CH_ppe_11211660.000531368
Prunus persicascaffold_35CH_ppe_43261250.0000000000637297
Prunus persicascaffold_35CH_ppe_9610260.000038201
Prunus persicascaffold_36CH_ppe_47291250.00000000000034289
Prunus persicascaffold_36CH_ppe_11011260.00000309509
Prunus persicascaffold_46CH_ppe_11910220.00000928864
Ricinus communis296201CH_rco_1646110.000251158
Ricinus communis296801CH_rco_127550.0000337088
Ricinus communis300261CH_rco_126550.0000337088
Ricinus communis301701CH_rco_106670.00000404092
Ricinus communis300263CH_rco_289550.000624186
Solanum lycopersicumch011CH_sly_94880.000000000281482
Solanum lycopersicumch041CH_sly_233670.00000653937
Solanum lycopersicumch012CH_sly_5715210.0000000000000127278
Solanum lycopersicumch013CH_sly_7715210.0000000000000304952
Solanum lycopersicumch043CH_sly_56915780.000475061
Solanum lycopersicumch043CH_sly_322780.00000697067
Solanum lycopersicumch015CH_sly_3815210.0000000000000127278
Solanum lycopersicumch016CH_sly_5015210.0000000000000304952
Solanum tuberosumchr011CH_stu_2218120.000000143284
Solanum tuberosumchr041CH_stu_261660.00000101646
Solanum tuberosumchr041CH_stu_17510180.00000000357523
Solanum tuberosumchr061CH_stu_11810120.00000000000593172
Solanum tuberosumchr012CH_stu_12015240.0000000000015061
Solanum tuberosumchr042CH_stu_16621740.000000000478598
Solanum tuberosumchr112CH_stu_41414560.000076608
Solanum tuberosumchr013CH_stu_12816240.0000000000000993282
Solanum tuberosumchr043CH_stu_10915180.0000000000000037441
Solanum tuberosumchr043CH_stu_565660.0000658514
Solanum tuberosumchr063CH_stu_12912120.000000000000119999
Solanum tuberosumchr113CH_stu_64814560.000211817
Solanum tuberosumchr044CH_stu_8710180.00000000357523
Solanum tuberosumchr064CH_stu_7210120.00000000000593172
Solanum tuberosumchr124CH_stu_6313220.000000000000206031
Solanum tuberosumchr015CH_stu_6715240.0000000000015061
Solanum tuberosumchr045CH_stu_8122810.000000000310693
Solanum tuberosumchr115CH_stu_14714560.000076608
Solanum tuberosumchr016CH_stu_8016240.0000000000000993282
Solanum tuberosumchr046CH_stu_7415180.0000000000000037441
Solanum tuberosumchr116CH_stu_20514560.000211817
Thellungiella parvulach1-11CH_tpa_115560.000271948
Thellungiella parvulach3-12CH_tpa_7416600.000000720297
Thellungiella parvulach3-13CH_tpa_7217600.000000116755
Thellungiella parvulach3-15CH_tpa_1516600.000000720297
Thellungiella parvulach3-16CH_tpa_1317600.000000116755
Theobroma cacaoscaffold_21CH_tca_284560.000479533
Theobroma cacaoscaffold_81CH_tca_116780.000000238286
Theobroma cacaoscaffold_73CH_tca_4477120.000831349
Theobroma cacaoscaffold_76CH_tca_105221510.000157672
Vitis viniferachr181CH_vvi_4113170.00000000000000118136
Vitis viniferachr181CH_vvi_110770.0000000166112
Vitis viniferachr71CH_vvi_2629350.000246303
Vitis viniferachr182CH_vvi_6113170.00000000000135046
Vitis viniferachr72CH_vvi_3659250.000923136
Vitis viniferachr183CH_vvi_3717194.21499e-19
Vitis viniferachr184CH_vvi_3013170.00000000000000118136
Vitis viniferachr74CH_vvi_10110500.000506838
Vitis viniferachr185CH_vvi_3813170.00000000000135046
Vitis viniferachr186CH_vvi_3517194.21499e-19
Zea mays31CH_zma_70790.000000333639
Zea mays33CH_zma_75890.0000000627789

Available child term results

GO term Description Number of clusters
GO:0001561fatty acid alpha-oxidation13
GO:0006505GPI anchor metabolic process2
GO:0006631fatty acid metabolic process8
GO:0006633fatty acid biosynthetic process40
GO:0006635fatty acid beta-oxidation3
GO:0006636unsaturated fatty acid biosynthetic process3
GO:0006651diacylglycerol biosynthetic process6
GO:0006656phosphatidylcholine biosynthetic process4
GO:0006672ceramide metabolic process1
GO:0006694steroid biosynthetic process6
GO:0006720isoprenoid metabolic process8
GO:0006721terpenoid metabolic process5
GO:0006722triterpenoid metabolic process2
GO:0008202steroid metabolic process6
GO:0008299isoprenoid biosynthetic process11
GO:0008610lipid biosynthetic process18
GO:0009244lipopolysaccharide core region biosynthetic process3
GO:0009247glycolipid biosynthetic process1
GO:0010028xanthophyll cycle2
GO:0010241ent-kaurene oxidation to kaurenoic acid3
GO:0010263tricyclic triterpenoid biosynthetic process5
GO:0010322regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway2
GO:0010371regulation of gibberellin biosynthetic process2
GO:0010373negative regulation of gibberellin biosynthetic process2
GO:0010422regulation of brassinosteroid biosynthetic process2
GO:0010423negative regulation of brassinosteroid biosynthetic process1
GO:0010430fatty acid omega-oxidation4
GO:0010597green leaf volatile biosynthetic process32
GO:0010683tricyclic triterpenoid metabolic process6
GO:0010686tetracyclic triterpenoid biosynthetic process12
GO:0010867positive regulation of triglyceride biosynthetic process5
GO:0016042lipid catabolic process7
GO:0016099monoterpenoid biosynthetic process2
GO:0016101diterpenoid metabolic process3
GO:0016103diterpenoid catabolic process4
GO:0016114terpenoid biosynthetic process2
GO:0016117carotenoid biosynthetic process3
GO:0016121carotene catabolic process1
GO:0016124xanthophyll catabolic process16
GO:0016127sterol catabolic process51
GO:0016128phytosteroid metabolic process6
GO:0016131brassinosteroid metabolic process53
GO:0016255attachment of GPI anchor to protein38
GO:0016487farnesol metabolic process2
GO:0019288isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway9
GO:0019370leukotriene biosynthetic process7
GO:0019375galactolipid biosynthetic process2
GO:0019408dolichol biosynthetic process10
GO:0019432triglyceride biosynthetic process2
GO:0019605butyrate metabolic process6
GO:0019745pentacyclic triterpenoid biosynthetic process8
GO:0030259lipid glycosylation4
GO:0030497fatty acid elongation4
GO:0031408oxylipin biosynthetic process12
GO:0036092phosphatidylinositol-3-phosphate biosynthetic process6
GO:0042214terpene metabolic process2
GO:0043693monoterpene biosynthetic process2
GO:0044242cellular lipid catabolic process1
GO:0044255cellular lipid metabolic process15
GO:0045337farnesyl diphosphate biosynthetic process6
GO:0046246terpene biosynthetic process4
GO:0046340diacylglycerol catabolic process6
GO:0046345abscisic acid catabolic process28
GO:0046459short-chain fatty acid metabolic process2
GO:0046466membrane lipid catabolic process8
GO:0046473phosphatidic acid metabolic process2
GO:0046477glycosylceramide catabolic process3
GO:0046488phosphatidylinositol metabolic process2
GO:0046854phosphatidylinositol phosphorylation3
GO:0046856phosphatidylinositol dephosphorylation4
GO:0050994regulation of lipid catabolic process2
GO:0051762sesquiterpene biosynthetic process2
GO:0051791medium-chain fatty acid metabolic process4
GO:0080003thalianol metabolic process16
GO:0090359negative regulation of abscisic acid biosynthetic process6
GO:1901601strigolactone biosynthetic process2

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V