Monocots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
evm.TU.AsparagusV1_05.3001.V1.1	Asparagus officinalis	HOM04x5M009759	ORTHO04x5M012088	1.4e-283	977.6	491	100.0
CALSI_Maker00038966	Calamus simplicifolius	HOM04x5M009759	ORTHO04x5M012088	1.9e-192	674.9	481	73.2
ASH_gene4427	Apostasia shenzhenica	HOM04x5M009759	ORTHO04x5M012088	2.9e-185	651.0	490	65.9
Aco015657	Ananas comosus	HOM04x5M009759	ORTHO04x5M012088	6.5e-185	649.8	461	71.8
GSVIVG01033352001	Vitis vinifera	HOM04x5M009759	ORTHO04x5M012088	3.7e-172	607.4	463	65.9
Solyc05g012800.1	Solanum lycopersicum	HOM04x5M009759	ORTHO04x5M012088	1.7e-153	545.4	475	58.7
Ma00_g03850	Musa acuminata	HOM04x5M009759	ORTHO04x5M012088	5.4e-131	470.7	339	68.1
gene93	Selaginella moellendorffii	HOM04x5M009759	ORTHO04x5M012088	4.3e-128	461.1	488	49.0
gene26309	Selaginella moellendorffii	HOM04x5M009759	ORTHO04x5M012088	5.6e-128	460.7	470	50.4
gene26313	Selaginella moellendorffii	HOM04x5M009759	ORTHO04x5M012088	8.1e-127	456.8	470	50.0
PEQU_09855	Phalaenopsis equestris	HOM04x5M009759	ORTHO04x5M012088	1.9e-123	445.7	308	69.2
Mapoly0099s0027	Marchantia polymorpha	HOM04x5M009759	ORTHO04x5M012088	5.6e-120	434.1	481	48.4
Pp3c10_15450	Physcomitrium patens	HOM04x5M009759	ORTHO04x5M012088	1.0e-113	413.3	473	47.6
PEQU_09854	Phalaenopsis equestris	HOM04x5M009759	ORTHO04x5M012088	1.4e-62	243.4	196	64.3
Zosma3816g00020	Zostera marina	HOM04x5M009759	ORTHO04x5M012088	1.8e-25	120.2	386	27.2
evm.TU.AsparagusV1_Unassigned.219.V1.1	Asparagus officinalis	HOM04x5M003355	ORTHO04x5M004677	1.2e-08	64.3	248	27.4
Pp3c23_15810	Physcomitrium patens	HOM04x5M003355	ORTHO04x5M004677	1.2e-08	64.3	248	26.6
p5.00_sc00097_p0008	Elaeis guineensis	HOM04x5M003355	ORTHO04x5M004677	2.2e-07	60.1	271	23.6
Mapoly0091s0082	Marchantia polymorpha	HOM04x5M003355	ORTHO04x5M004677	2.2e-07	60.1	190	26.8
evm.TU.AsparagusV1_07.2213.V1.1	Asparagus officinalis	HOM04x5M003355	ORTHO04x5M004677	2.9e-07	59.7	132	32.6
CALSI_Maker00009677	Calamus simplicifolius	HOM04x5M003355	ORTHO04x5M004677	2.9e-07	59.7	250	25.6
CALSI_Maker00016688	Calamus simplicifolius	HOM04x5M003355	ORTHO04x5M004677	2.9e-07	59.7	250	25.6
Aco019296	Ananas comosus	HOM04x5M009911	ORTHO04x5M012287	6.4e-07	58.5	287	24.0
Aco010253	Ananas comosus	HOM04x5M003355	ORTHO04x5M004677	1.1e-06	57.8	230	24.3
p5.00_sc00197_p0046	Elaeis guineensis	HOM04x5M003355	ORTHO04x5M004677	1.9e-06	57.0	196	26.0
PAB00064689	Picea abies	HOM04x5M003355	ORTHO04x5M004677	1.9e-06	57.0	298	22.5
CALSI_Maker00014129	Calamus simplicifolius	HOM04x5M009911	ORTHO04x5M012287	5.4e-06	55.5	288	22.6

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment