Interactive Phylogenetics Module

Gene Id
Zm00001d051367

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001d051367 Zea mays B73 HOM04x5M003245 ORTHO04x5M010895 5.0e-189 663.3 432 100.0
Zm00008a016891 Zea mays PH207 HOM04x5M003245 ORTHO04x5M010895 7.3e-164 579.7 432 92.6
Misin07G434400 Miscanthus sinensis HOM04x5M003245 ORTHO04x5M010895 2.3e-149 531.6 433 85.2
Sspon.01G0000930-1P Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 3.4e-145 517.7 426 84.7
Sspon.01G0000920-1A Saccharum spontaneum HOM04x5M003245 ORTHO04x5M010895 1.9e-140 501.9 440 81.6
Seita.1G260300 Setaria italica HOM04x5M003245 ORTHO04x5M005668 2.0e-137 491.9 426 77.0
Sobic.004G294800 Sorghum bicolor HOM04x5M003245 ORTHO04x5M010895 5.8e-129 463.8 427 81.3
Misin08G230600 Miscanthus sinensis HOM04x5M003245 ORTHO04x5M005668 8.4e-128 459.9 432 76.9
Zm00007a00020643 Zea mays B104 HOM04x5M003245 ORTHO04x5M010895 1.4e-114 416.0 258 99.2
Bradi3g50721 Brachypodium distachyon HOM04x5M003245 ORTHO04x5M010895 7.7e-113 410.2 419 65.9
LOC_Os02g44102 Oryza sativa ssp. japonica HOM04x5M003245 ORTHO04x5M010895 7.4e-108 393.7 407 63.4
TraesCS6D02G231600 Triticum aestivum HOM04x5M003245 ORTHO04x5M010895 1.5e-100 369.4 431 61.5
Pgl_GLEAN_10009581 Cenchrus americanus HOM04x5M003245 ORTHO04x5M010895 8.2e-91 337.0 432 56.9
PH01003305G0030 Phyllostachys edulis HOM04x5M003245 ORTHO04x5M005668 2.0e-84 315.8 428 56.5
Oropetium_20150105_21241 Oropetium thomaeum HOM04x5M003245 ORTHO04x5M010895 4.8e-83 311.2 431 55.7
LP006588 Lolium perenne HOM04x5M003245 ORTHO04x5M010895 9.1e-82 307.0 431 57.3
HORVU6Hr1G063120 Hordeum vulgare HOM04x5M003245 ORTHO04x5M010895 2.7e-65 252.3 210 62.9
PH01000995G0530 Phyllostachys edulis HOM04x5M003245 ORTHO04x5M005668 2.5e-63 245.7 342 50.0
TRITD6Bv1G145200 Triticum turgidum HOM04x5M003245 ORTHO04x5M010895 2.1e-41 172.9 147 62.6
TRITD6Av1G159250 Triticum turgidum HOM04x5M003245 ORTHO04x5M010895 1.3e-40 170.2 147 61.9
TraesCS6B02G275500 Triticum aestivum HOM04x5M003245 ORTHO04x5M010895 7.6e-36 154.5 215 63.3
TraesCS6A02G249900 Triticum aestivum HOM04x5M003245 ORTHO04x5M010895 1.4e-34 150.2 215 62.3
Seita.1G235200 Setaria italica HOM04x5M003245 ORTHO04x5M024996 2.4e-34 149.4 286 40.9
Zjn_sc00007.1.g10190.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M003245 ORTHO04x5M005668 1.7e-32 143.3 132 61.4
Misin06G230200 Miscanthus sinensis HOM04x5M000001 ORTHO04x5M010092 2.6e-28 129.4 64 100.0
Sobic.003G277100 Sorghum bicolor HOM04x5M000001 ORTHO04x5M010092 6.4e-27 124.8 64 95.3
Sspon.03G0007720-1A Saccharum spontaneum HOM04x5M000001 ORTHO04x5M010092 8.4e-27 124.4 64 95.3
Misin05G256300 Miscanthus sinensis HOM04x5M000001 ORTHO04x5M010092 7.6e-20 101.3 55 90.9
Sspon.03G0007720-2C Saccharum spontaneum HOM04x5M000001 ORTHO04x5M010092 9.3e-18 94.4 46 97.8
p5.00_sc00023_p0057 Elaeis guineensis HOM04x5M028124 ORTHO04x5M010895 3.5e-17 92.4 364 37.1
Pgl_GLEAN_10014428 Cenchrus americanus HOM04x5M003245 ORTHO04x5M010895 7.9e-17 91.3 98 58.2
CALSI_Maker00010636 Calamus simplicifolius HOM04x5M028124 ORTHO04x5M010895 1.5e-12 77.0 366 34.7
Misin07G400900 Miscanthus sinensis HOM04x5M003245 ORTHO04x5M024996 7.6e-12 74.7 292 30.1

Amborella trichopoda (0 genes)
Ananas comosus (0 genes)
Apostasia shenzhenica (0 genes)
Arabidopsis thaliana (0 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (5 genes)
Musa acuminata (0 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (0 genes)
Oryza sativa ssp. indica (0 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (0 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (0 genes)
Picea abies (0 genes)
Populus trichocarpa (0 genes)
Saccharum spontaneum (4 genes)
Selaginella moellendorffii (0 genes)
Setaria italica (2 genes)
Solanum lycopersicum (0 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (0 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (0 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zea mays PH207 (1 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings