Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
RCC4223.29g01600	Picochlorum_RCC4223	6e-122	348	172	100.00
CR09G11630	Chlamydomonas reinhardtii	8e-42	148	162	51.23
CNC64A_010G00450	Chlorella sp NC64A	2e-39	140	177	41.81
VC00G112680	Volvox carteri	2e-39	141	157	47.77
phs140170	Phytophtora sojae	3e-39	140	166	40.36
AP00G45760	Auxenochlorella protothecoides	5e-39	139	145	45.52
CV00G82450	Coccomyxa subellipsoidea C-169	4e-38	137	146	46.58
OS12G07220	Oryza sativa	5e-38	137	167	41.32
MRCC299_09G03160	Micromonas sp RCC299	2e-37	135	145	46.21
OS07G44840	Oryza sativa	1e-36	134	167	40.12
ATR_00011G00990	Amborella trichopoda	1e-36	134	161	42.24
OS01G18070	Oryza sativa	2e-36	132	166	39.16
AT1G47260	Arabidopsis thaliana	4e-36	132	167	39.52
CM13G00520	Cyanidioschyzon merolae	6e-36	134	158	44.94
AT1G19580	Arabidopsis thaliana	6e-36	131	169	39.05
MP07G02760	Micromonas pusilla strain CCMP1545	2e-35	130	151	42.38
gsu30790	Galdieria sulphuraria	3e-35	130	175	38.86
RCC4223.07g00990	Picochlorum_RCC4223	3e-34	127	157	42.68
emh676960	Emiliania huxleyi	4e-34	125	168	41.07
PP00013G01230	Physcomitrella patens	6e-34	125	162	39.51
phs179330	Phytophtora sojae	7e-34	125	163	39.26
AC00G74240	Asterochloris sp. Cgr-DA1pho v2.0	8e-34	126	187	37.43
PI00G04970	Picochlorum sp. SENEW3 (SE3)	1e-33	125	157	41.40
PP00207G00080	Physcomitrella patens	2e-32	122	147	39.46
AP00G45310	Auxenochlorella protothecoides	3e-32	121	164	39.63
RCC4223.11g00160	Picochlorum_RCC4223	3e-31	118	145	41.38
PI00G11790	Picochlorum sp. SENEW3 (SE3)	4e-31	117	145	41.38
AT5G66510	Arabidopsis thaliana	4e-31	119	162	40.12
PP00031G01120	Physcomitrella patens	9e-31	118	145	38.62
pte791750	Paramecium tetraurelia	2e-30	118	144	38.19
CV00G44250	Coccomyxa subellipsoidea C-169	2e-30	115	168	37.50
pte777030	Paramecium tetraurelia	3e-30	117	145	38.62
VC00G101190	Volvox carteri	3e-30	115	153	39.87
Naga_100199g6	Nannochloropsis gaditana	4e-30	116	143	39.86
pte725170	Paramecium tetraurelia	4e-30	117	144	38.19
pte617140	Paramecium tetraurelia	8e-30	116	145	37.24
HE0000G41030	Helicosporidium sp.	9e-30	114	166	39.16
PTI_07G02580	Phaeodactylum tricornutum	1e-29	115	167	40.72
DDB_G0278597	Dictyostelium discoideum	8e-29	112	166	37.35
AC00G07170	Asterochloris sp. Cgr-DA1pho v2.0	9e-29	112	130	44.62
TP05G01640	Thalassiosira pseudonana	1e-28	112	144	41.67
ES0011G00630	Ectocarpus siliculosus	2e-28	112	142	39.44
CNC64A_004G04420	Chlorella sp NC64A	4e-28	110	168	41.07
CR12G07230	Chlamydomonas reinhardtii	1e-27	108	141	39.72
CR06G11900	Chlamydomonas reinhardtii	1e-27	109	168	35.71
CV00G42680	Coccomyxa subellipsoidea C-169	2e-27	107	155	34.19
DDB_G0288155	Dictyostelium discoideum	4e-27	107	151	39.74
FC012G01980	Fragilariopsis cylindrus	7e-27	105	149	40.94
AC00G69940	Asterochloris sp. Cgr-DA1pho v2.0	2e-26	105	172	35.47
AP00G50750	Auxenochlorella protothecoides	2e-26	106	143	34.97
CNC64A_004G01810	Chlorella sp NC64A	4e-26	104	143	33.57
Naga_100187g5	Nannochloropsis gaditana	6e-26	105	145	37.93
VC00G22780	Volvox carteri	9e-26	104	168	33.33
AA0003G02530	Aureococcus anophagefferens	2e-25	102	168	35.12
AA0230G00030	Aureococcus anophagefferens	3e-25	102	152	34.87
HE0000G26870	Helicosporidium sp.	3e-25	102	157	37.58
AT3G48680	Arabidopsis thaliana	2e-23	97.8	143	34.27
ATR_00025G00760	Amborella trichopoda	3e-23	97.4	154	33.12
pte113000	Paramecium tetraurelia	4e-23	97.1	142	35.21
AA0002G00020	Aureococcus anophagefferens	8e-23	95.9	130	36.92
ES0174G00040	Ectocarpus siliculosus	9e-23	95.5	154	37.66
OS02G30460	Oryza sativa	1e-22	95.9	147	33.33
pte474410	Paramecium tetraurelia	1e-22	95.5	142	34.51
PI00G13110	Picochlorum sp. SENEW3 (SE3)	4e-22	94.7	146	36.99
TP01G07200	Thalassiosira pseudonana	9e-22	91.3	129	38.76
emh726740	Emiliania huxleyi	3e-21	91.7	162	30.25
TP05G03220	Thalassiosira pseudonana	4e-21	90.5	119	39.50
gsu91670	Galdieria sulphuraria	1e-20	90.5	162	34.57
emh191260	Emiliania huxleyi	1e-20	88.6	157	35.67
RCC4223.13g02230	Picochlorum_RCC4223	2e-20	90.1	160	34.38
AT5G63510	Arabidopsis thaliana	2e-20	89.7	170	30.00
emh550290	Emiliania huxleyi	7e-20	86.7	156	35.26
FC005G05950	Fragilariopsis cylindrus	1e-19	88.2	124	43.55
PP00038G01370	Physcomitrella patens	1e-19	87.0	166	28.92
HE0000G30220	Helicosporidium sp.	4e-19	85.9	157	29.94
ccr103560	Chondrus crispus	4e-19	85.9	149	31.54
MRCC299_10G02700	Micromonas sp RCC299	1e-18	84.0	137	33.58
ES0125G00250	Ectocarpus siliculosus	2e-18	83.2	163	33.13
PTI_29G01180	Phaeodactylum tricornutum	3e-18	83.6	167	31.74
MP03G04440	Micromonas pusilla strain CCMP1545	3e-18	83.6	137	35.04
PTI_29G01240	Phaeodactylum tricornutum	3e-18	83.2	167	31.74
FC015G00720	Fragilariopsis cylindrus	9e-18	82.0	175	30.86
PP00002G02340	Physcomitrella patens	1e-17	82.0	166	26.51
pte50390	Paramecium tetraurelia	6e-17	79.3	142	33.80
pte56560	Paramecium tetraurelia	7e-17	79.3	143	31.47
PTI_11G03160	Phaeodactylum tricornutum	6e-16	77.4	159	32.70
TP01G05500	Thalassiosira pseudonana	2e-15	74.7	144	34.03
gsu34770	Galdieria sulphuraria	1e-14	72.8	157	30.57
DDB_G0278579	Dictyostelium discoideum	4e-09	56.6	156	27.56
FBgn0040228	Drosophila melanogaster	1e-08	55.5	156	27.56
ENSG00000166847	Homo sapiens	2e-08	54.7	152	24.34
ENSMUSG00000030868	Mus musculus	3e-08	54.3	152	23.68
ES0120G00360	Ectocarpus siliculosus	7e-08	53.1	138	28.99

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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