Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS06G48160	Oryza sativa	0.0	612	294	100.00
OS06G48200	Oryza sativa	8e-141	406	282	70.21
AT5G57560	Arabidopsis thaliana	5e-137	396	290	62.07
AT4G25810	Arabidopsis thaliana	2e-134	389	287	64.46
AT5G57550	Arabidopsis thaliana	7e-127	370	283	59.72
ATR_00062G00050	Amborella trichopoda	1e-125	367	289	59.52
AT4G30270	Arabidopsis thaliana	2e-125	366	271	62.73
OS06G48180	Oryza sativa	2e-125	367	292	60.27
AT4G14130	Arabidopsis thaliana	2e-125	367	290	61.03
AT2G18800	Arabidopsis thaliana	7e-125	366	299	57.53
AT3G23730	Arabidopsis thaliana	7e-124	363	290	59.31
ATR_00019G03570	Amborella trichopoda	8e-124	362	289	59.86
ATR_00062G00020	Amborella trichopoda	9e-124	362	280	60.36
AT5G48070	Arabidopsis thaliana	9e-123	360	290	58.62
AT5G57540	Arabidopsis thaliana	9e-118	347	275	59.64
AT5G57530	Arabidopsis thaliana	1e-117	347	274	59.49
AT4G25820	Arabidopsis thaliana	8e-117	345	283	58.66
ATR_00019G03590	Amborella trichopoda	2e-116	345	305	53.77
ATR_00065G01750	Amborella trichopoda	3e-116	343	298	58.39
ATR_00065G01770	Amborella trichopoda	8e-115	340	295	57.63
AT4G30290	Arabidopsis thaliana	2e-112	333	292	55.82
AT1G65310	Arabidopsis thaliana	2e-111	331	274	59.49
AT4G30280	Arabidopsis thaliana	8e-111	329	274	57.66
OS04G51460	Oryza sativa	2e-104	313	291	51.55
OS06G48170	Oryza sativa	3e-104	313	275	53.45
OS04G51520	Oryza sativa	2e-99	301	285	51.93
OS04G51450	Oryza sativa	4e-99	301	282	53.90
OS11G33270	Oryza sativa	3e-97	295	305	50.49
AT5G13870	Arabidopsis thaliana	6e-96	291	295	49.83
AT4G28850	Arabidopsis thaliana	2e-94	288	287	49.48
ATR_00016G02940	Amborella trichopoda	3e-94	287	265	52.08
ATR_00019G03550	Amborella trichopoda	4e-94	286	296	47.30
OS08G14210	Oryza sativa	6e-94	289	296	47.30
AT5G65730	Arabidopsis thaliana	1e-92	283	297	45.12
PP00168G00050	Physcomitrella patens	1e-92	284	272	48.90
ATR_00026G01160	Amborella trichopoda	6e-91	278	295	45.08
AT4G03210	Arabidopsis thaliana	3e-90	277	293	48.12
OS08G14200	Oryza sativa	1e-89	275	289	47.75
AT2G06850	Arabidopsis thaliana	1e-89	276	266	52.26
ATR_00026G01070	Amborella trichopoda	2e-89	274	286	47.20
ATR_00453G00010	Amborella trichopoda	7e-89	275	286	47.90
AT4G37800	Arabidopsis thaliana	8e-89	273	293	45.73
OS08G13920	Oryza sativa	5e-87	269	249	53.01
PP00004G00240	Physcomitrella patens	7e-87	268	299	45.48
AT2G14620	Arabidopsis thaliana	2e-86	268	297	43.77
PP00168G00160	Physcomitrella patens	6e-86	266	259	49.42
PP00309G00230	Physcomitrella patens	2e-85	265	299	44.15
OS02G17880	Oryza sativa	2e-85	265	275	48.36
OS08G13980	Oryza sativa	1e-84	263	281	49.47
OS02G17900	Oryza sativa	1e-84	262	276	46.01
PP00272G00150	Physcomitrella patens	2e-84	262	254	49.21
OS06G22919	Oryza sativa	1e-83	261	293	44.37
PP00004G00260	Physcomitrella patens	3e-83	260	273	46.15
ATR_00062G00060	Amborella trichopoda	3e-82	253	206	58.74
PP00309G00220	Physcomitrella patens	6e-82	256	274	45.26
PP00026G00650	Physcomitrella patens	3e-81	254	261	45.98
PP00291G00470	Physcomitrella patens	4e-80	252	290	43.79
PP00309G00140	Physcomitrella patens	6e-80	251	292	44.52
PP00195G00150	Physcomitrella patens	9e-80	251	266	47.74
PP00193G00050	Physcomitrella patens	1e-78	249	257	48.25
AT3G25050	Arabidopsis thaliana	2e-77	244	272	46.32
ATR_00004G02430	Amborella trichopoda	3e-77	244	295	42.37
AT4G13090	Arabidopsis thaliana	5e-77	243	270	47.04
PP00618G00010	Physcomitrella patens	6e-77	247	290	43.10
AT1G11545	Arabidopsis thaliana	2e-76	242	303	41.25
OS07G34580	Oryza sativa	1e-75	240	281	44.84
AT4G13080	Arabidopsis thaliana	4e-75	238	267	44.19
ATR_00026G01110	Amborella trichopoda	8e-74	232	222	49.55
PP00213G00650	Physcomitrella patens	5e-70	225	294	41.84
ATR_00026G01130	Amborella trichopoda	3e-69	219	164	58.54
ATR_00109G01360	Amborella trichopoda	4e-68	217	205	50.73
OS04G51510	Oryza sativa	1e-67	218	291	43.64
PP00122G00290	Physcomitrella patens	6e-66	214	272	43.01
PP00410G00130	Physcomitrella patens	7e-64	209	296	38.51
PP00156G00440	Physcomitrella patens	2e-62	205	264	40.91
PP00156G00420	Physcomitrella patens	2e-62	205	264	40.91
ATR_00019G03580	Amborella trichopoda	2e-61	198	131	66.41
PP00309G00200	Physcomitrella patens	2e-60	198	238	45.38
OS06G13040	Oryza sativa	6e-60	199	284	42.61
AT2G36870	Arabidopsis thaliana	2e-59	197	277	41.16
OS07G29750	Oryza sativa	6e-59	197	276	41.67
PP00019G00220	Physcomitrella patens	4e-58	194	263	39.54
OS03G01800	Oryza sativa	6e-58	194	268	41.42
ATR_00082G00420	Amborella trichopoda	8e-58	194	245	42.86
OS02G57770	Oryza sativa	1e-57	194	257	43.97
AT3G44990	Arabidopsis thaliana	9e-57	191	255	42.75
OS10G39840	Oryza sativa	9e-57	191	267	40.45
PP00486G00100	Physcomitrella patens	1e-56	191	252	42.06
PP00486G00080	Physcomitrella patens	1e-56	191	252	42.06
PP00081G01240	Physcomitrella patens	2e-56	190	253	43.08
AT1G32170	Arabidopsis thaliana	7e-56	190	254	40.55
AT1G10550	Arabidopsis thaliana	2e-55	188	265	38.11
PP00005G00910	Physcomitrella patens	9e-55	189	268	37.31
PP00011G01530	Physcomitrella patens	1e-53	183	265	40.00
ATR_00013G00910	Amborella trichopoda	3e-53	179	236	39.41
OS10G02770	Oryza sativa	9e-53	182	260	37.69
PP00074G00080	Physcomitrella patens	2e-52	183	264	38.26
ATR_00024G00080	Amborella trichopoda	3e-51	177	278	35.97
AT2G01850	Arabidopsis thaliana	2e-50	175	305	33.77
OS02G03550	Oryza sativa	1e-49	174	249	39.36
PP00141G00620	Physcomitrella patens	1e-49	172	249	42.17
AT1G14720	Arabidopsis thaliana	1e-49	173	254	37.01
ATR_00026G01150	Amborella trichopoda	2e-49	167	131	55.73
OS09G23220	Oryza sativa	2e-48	170	267	38.20
AT4G18990	Arabidopsis thaliana	4e-48	170	292	33.90
PP00048G00500	Physcomitrella patens	2e-47	167	279	36.20
OS03G13570	Oryza sativa	2e-47	167	296	34.46
PP00089G00910	Physcomitrella patens	5e-47	166	260	38.08
ATR_00048G00580	Amborella trichopoda	2e-46	164	233	38.20
AT3G48580	Arabidopsis thaliana	6e-44	157	275	33.09
PP00346G00070	Physcomitrella patens	2e-43	157	263	37.64
OS02G46910	Oryza sativa	2e-43	157	304	34.87
OS03G63760	Oryza sativa	4e-42	154	259	34.36
PP00089G00960	Physcomitrella patens	3e-38	141	152	45.39
OS10G42670	Oryza sativa	3e-37	140	246	36.18
ATR_00337G00020	Amborella trichopoda	1e-34	127	91	63.74
ATR_00062G00010	Amborella trichopoda	4e-32	123	88	65.91
ATR_00062G00030	Amborella trichopoda	4e-24	99.0	115	45.22
PP00353G00180	Physcomitrella patens	8e-21	93.2	155	38.06
ATR_00069G00950	Amborella trichopoda	2e-20	92.0	174	33.33
ATR_00055G01550	Amborella trichopoda	1e-19	86.7	126	40.48
PP00037G01500	Physcomitrella patens	2e-18	89.7	171	33.33
PP00002G02710	Physcomitrella patens	2e-18	82.4	76	53.95
PP00024G01140	Physcomitrella patens	2e-17	86.3	188	32.45
OS03G02610	Oryza sativa	8e-17	82.4	179	35.20
ATR_01729G00020	Amborella trichopoda	1e-16	77.0	64	53.12
ATR_00065G01730	Amborella trichopoda	3e-16	76.3	54	66.67
ATR_00004G02620	Amborella trichopoda	2e-14	72.0	68	45.59
YLR213C	Saccharomyces cerevisiae strain S288C	3e-12	70.5	178	29.78
ATR_00065G01780	Amborella trichopoda	6e-11	62.4	91	40.66
YGR189C	Saccharomyces cerevisiae strain S288C	9e-11	66.2	181	28.18
OS04G53950	Oryza sativa	9e-08	56.6	45	57.78

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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