Gene: AT5G57560 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G57560
Transcript Identifier
AT5G57560.1
Gene Type
Coding gene
Location
5 : 23307296-23308235 : negative

Family Information

Homologous gene family
HOM03P000297
(134 genes in 5 species)
specific family
Orthologous gene family
ORTHO03P005895
(14 genes in 3 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Identifiers

Type Value

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
IEP
Gene Ontologyresponse to cold1 2 3 4
GO:0009611
RCA
Gene Ontologyresponse to wounding5 6
GO:0009612
IEP
RCA
Gene Ontologyresponse to mechanical stimulus5 6 7 8
GO:0010200
RCA
Gene Ontologyresponse to chitin5 6
GO:0009408
IEP
Gene Ontologyresponse to heat9 10
GO:0009733
IEP
Gene Ontologyresponse to auxin11 12
GO:0009741
IEP
Gene Ontologyresponse to brassinosteroid11 12
GO:0009664
TAS
Gene Ontologyplant-type cell wall organization7 8

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016798
ISS
Gene Ontologyhydrolase activity, acting on glycosyl bonds13
GO:0016762
IDA
Gene Ontologyxyloglucan:xyloglucosyl transferase activity14 15

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast16
GO:0005794
IDA
Gene OntologyGolgi apparatus17 18
GO:0005618
IDA
Gene Ontologycell wall7 8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000757Glycoside hydrolase, family 16
IPR008263Glycoside hydrolase, family 16, active site
IPR010713Xyloglucan endo-transglycosylase, C-terminal
IPR013320Concanavalin A-like lectin/glucanase domain
IPR016455Xyloglucan endotransglucosylase/hydrolase

No MapMan annotations defined for this gene.