Gene: AT5G57540 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G57540
Transcript Identifier
AT5G57540.1
Gene Type
Coding gene
Location
5 : 23302996-23304049 : negative

Family Information

Homologous gene family
HOM03P000297
(134 genes in 5 species)
specific family
Orthologous gene family
ORTHO03P033581
(3 genes in 1 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Identifiers

Type Value

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010411
IDA
Gene Ontologyxyloglucan metabolic process1 2
GO:0010054
RCA
Gene Ontologytrichoblast differentiation3 4
GO:0048765
RCA
Gene Ontologyroot hair cell differentiation3 4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016798
ISS
Gene Ontologyhydrolase activity, acting on glycosyl bonds5
GO:0033946
IDA
Gene Ontologyxyloglucan-specific endo-beta-1,4-glucanase activity1 2
GO:0080039
IDA
Gene Ontologyxyloglucan endotransglucosylase activity1 2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region6

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000757Glycoside hydrolase, family 16
IPR008263Glycoside hydrolase, family 16, active site
IPR008264Beta-glucanase
IPR010713Xyloglucan endo-transglycosylase, C-terminal
IPR013320Concanavalin A-like lectin/glucanase domain
IPR016455Xyloglucan endotransglucosylase/hydrolase

No MapMan annotations defined for this gene.