Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS03G13570	Oryza sativa	0.0	697	339	100.00
OS10G02770	Oryza sativa	2e-158	454	279	78.14
AT2G01850	Arabidopsis thaliana	8e-134	392	318	60.06
AT1G14720	Arabidopsis thaliana	1e-133	391	322	57.76
ATR_00024G00080	Amborella trichopoda	6e-125	369	298	59.40
OS09G23220	Oryza sativa	6e-118	351	269	64.68
OS02G03550	Oryza sativa	9e-114	340	273	58.97
AT1G32170	Arabidopsis thaliana	6e-112	336	286	55.94
OS03G63760	Oryza sativa	5e-109	329	311	54.02
OS02G46910	Oryza sativa	2e-106	322	291	59.11
ATR_00048G00580	Amborella trichopoda	2e-104	315	274	56.57
AT4G18990	Arabidopsis thaliana	2e-104	317	309	49.51
OS10G42670	Oryza sativa	8e-96	294	275	54.91
AT1G10550	Arabidopsis thaliana	8e-80	253	305	41.31
OS03G01800	Oryza sativa	5e-75	240	263	45.25
OS07G29750	Oryza sativa	3e-71	230	297	41.08
AT4G13080	Arabidopsis thaliana	5e-69	224	297	37.71
AT4G13090	Arabidopsis thaliana	6e-69	224	266	42.11
OS10G39840	Oryza sativa	4e-68	222	263	43.73
ATR_00082G00420	Amborella trichopoda	7e-68	221	261	42.91
OS02G57770	Oryza sativa	9e-67	219	235	47.23
ATR_00013G00910	Amborella trichopoda	2e-66	215	217	48.39
PP00074G00080	Physcomitrella patens	3e-65	218	252	44.84
PP00005G00910	Physcomitrella patens	1e-64	217	344	36.63
AT2G36870	Arabidopsis thaliana	3e-64	212	306	39.87
AT4G37800	Arabidopsis thaliana	1e-61	205	272	40.44
AT5G65730	Arabidopsis thaliana	6e-61	203	271	40.22
AT3G25050	Arabidopsis thaliana	1e-60	202	264	38.64
AT5G13870	Arabidopsis thaliana	5e-59	198	306	36.27
PP00004G00260	Physcomitrella patens	8e-59	198	266	39.47
AT3G44990	Arabidopsis thaliana	4e-58	196	297	38.72
ATR_00019G03550	Amborella trichopoda	7e-57	192	264	38.26
OS11G33270	Oryza sativa	1e-56	192	269	38.29
OS06G48180	Oryza sativa	3e-56	191	283	37.46
PP00004G00240	Physcomitrella patens	7e-56	190	285	38.25
PP00168G00160	Physcomitrella patens	3e-55	189	268	37.69
ATR_00026G01160	Amborella trichopoda	2e-54	186	264	37.12
ATR_00004G02430	Amborella trichopoda	4e-54	186	268	36.57
AT1G11545	Arabidopsis thaliana	2e-53	184	288	36.46
AT2G06850	Arabidopsis thaliana	2e-53	183	285	36.14
PP00309G00230	Physcomitrella patens	9e-53	182	291	36.08
ATR_00062G00050	Amborella trichopoda	1e-52	181	292	34.59
PP00309G00220	Physcomitrella patens	2e-52	182	263	37.64
ATR_00062G00020	Amborella trichopoda	3e-52	181	298	35.23
OS04G51460	Oryza sativa	5e-51	177	257	37.74
AT2G14620	Arabidopsis thaliana	6e-51	177	285	35.79
ATR_00016G02940	Amborella trichopoda	8e-51	177	269	34.57
OS07G34580	Oryza sativa	9e-51	177	266	36.47
ATR_00453G00010	Amborella trichopoda	2e-50	177	304	35.53
AT4G25810	Arabidopsis thaliana	3e-50	175	289	34.26
OS04G51450	Oryza sativa	3e-50	176	261	38.31
PP00410G00130	Physcomitrella patens	3e-50	175	252	38.10
PP00193G00050	Physcomitrella patens	4e-50	176	248	38.71
AT4G03210	Arabidopsis thaliana	4e-50	175	282	35.82
PP00291G00470	Physcomitrella patens	5e-50	175	251	37.85
PP00309G00140	Physcomitrella patens	7e-50	174	282	34.75
ATR_00026G01070	Amborella trichopoda	2e-49	172	241	39.00
PP00168G00050	Physcomitrella patens	3e-49	173	266	35.34
PP00618G00010	Physcomitrella patens	3e-49	176	251	38.25
PP00195G00150	Physcomitrella patens	4e-49	173	268	35.45
AT5G57560	Arabidopsis thaliana	9e-49	171	275	35.27
PP00026G00650	Physcomitrella patens	1e-48	171	248	36.29
PP00122G00290	Physcomitrella patens	5e-48	169	312	34.94
OS06G13040	Oryza sativa	1e-47	169	268	37.31
AT5G57550	Arabidopsis thaliana	2e-47	167	291	32.99
OS08G14200	Oryza sativa	3e-47	167	255	34.12
PP00019G00220	Physcomitrella patens	3e-47	167	269	36.06
ATR_00019G03570	Amborella trichopoda	3e-47	167	268	34.33
PP00486G00100	Physcomitrella patens	3e-47	167	243	39.92
PP00486G00080	Physcomitrella patens	3e-47	167	243	39.92
AT4G30270	Arabidopsis thaliana	5e-47	166	265	34.72
PP00213G00650	Physcomitrella patens	6e-47	167	258	37.60
OS06G48200	Oryza sativa	8e-47	166	284	32.75
AT2G18800	Arabidopsis thaliana	3e-46	165	275	33.45
OS08G13980	Oryza sativa	3e-46	165	257	36.96
AT4G14130	Arabidopsis thaliana	4e-46	164	302	34.44
OS06G48170	Oryza sativa	5e-46	164	265	33.96
PP00272G00150	Physcomitrella patens	1e-45	163	296	32.09
OS08G14210	Oryza sativa	2e-45	164	307	33.22
OS08G13920	Oryza sativa	2e-45	162	258	36.82
OS06G48160	Oryza sativa	2e-45	162	296	33.78
ATR_00026G01110	Amborella trichopoda	3e-45	160	215	40.00
AT5G57540	Arabidopsis thaliana	7e-45	161	265	33.96
AT4G30290	Arabidopsis thaliana	1e-44	160	265	36.60
AT4G30280	Arabidopsis thaliana	2e-44	159	240	37.92
ATR_00019G03590	Amborella trichopoda	3e-44	160	287	33.80
AT3G23730	Arabidopsis thaliana	3e-44	159	274	33.94
ATR_00065G01770	Amborella trichopoda	4e-44	159	285	35.44
AT5G57530	Arabidopsis thaliana	5e-44	159	265	33.58
AT4G25820	Arabidopsis thaliana	5e-44	159	273	33.33
PP00011G01530	Physcomitrella patens	1e-43	158	323	31.58
AT5G48070	Arabidopsis thaliana	1e-43	157	244	34.02
ATR_00065G01750	Amborella trichopoda	3e-43	157	287	34.15
PP00141G00620	Physcomitrella patens	7e-43	155	244	40.16
AT4G28850	Arabidopsis thaliana	1e-42	155	297	31.99
PP00309G00200	Physcomitrella patens	2e-42	153	231	38.53
AT1G65310	Arabidopsis thaliana	3e-42	154	262	35.88
OS04G51520	Oryza sativa	1e-41	153	284	34.15
ATR_00026G01130	Amborella trichopoda	4e-41	148	176	43.75
PP00081G01240	Physcomitrella patens	1e-39	147	243	36.21
PP00156G00440	Physcomitrella patens	1e-39	147	234	35.90
PP00156G00420	Physcomitrella patens	1e-39	147	234	35.90
PP00346G00070	Physcomitrella patens	2e-38	145	297	31.65
OS02G17900	Oryza sativa	8e-38	142	260	33.85
ATR_00062G00060	Amborella trichopoda	1e-36	136	188	35.64
PP00048G00500	Physcomitrella patens	2e-36	139	329	30.70
OS02G17880	Oryza sativa	7e-36	137	257	34.24
PP00089G00910	Physcomitrella patens	1e-35	136	241	34.44
ATR_00109G01360	Amborella trichopoda	1e-33	129	191	35.08
OS06G22919	Oryza sativa	8e-33	129	205	35.12
OS04G51510	Oryza sativa	4e-32	126	247	31.17
AT3G48580	Arabidopsis thaliana	1e-31	125	260	30.77
ATR_00026G01150	Amborella trichopoda	9e-30	117	138	40.58
PP00089G00960	Physcomitrella patens	4e-28	115	183	36.07
ATR_00069G00950	Amborella trichopoda	1e-26	110	157	40.13
PP00353G00180	Physcomitrella patens	3e-24	103	168	36.90
OS03G02610	Oryza sativa	1e-21	97.4	178	37.64
ATR_00019G03580	Amborella trichopoda	3e-21	93.2	116	37.93
ATR_00055G01550	Amborella trichopoda	2e-20	89.4	108	37.96
PP00024G01140	Physcomitrella patens	2e-18	89.7	180	33.89
ATR_01729G00020	Amborella trichopoda	9e-17	78.2	69	52.17
PP00037G01500	Physcomitrella patens	1e-16	85.1	172	32.56
YGR189C	Saccharomyces cerevisiae strain S288C	5e-11	67.4	161	28.57
YLR213C	Saccharomyces cerevisiae strain S288C	7e-11	67.0	206	27.18
PP00002G02710	Physcomitrella patens	9e-11	62.0	78	41.03
ATR_00004G02620	Amborella trichopoda	2e-10	61.6	68	44.12
ATR_00337G00020	Amborella trichopoda	3e-09	58.9	94	34.04
ATR_00062G00010	Amborella trichopoda	1e-08	58.2	90	35.56

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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