Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ATR_00106G00050	Amborella trichopoda	0.0	1683	811	100.00
OS03G22120	Oryza sativa	0.0	1345	807	79.06
AT4G02280	Arabidopsis thaliana	0.0	1340	808	77.85
OS03G28330	Oryza sativa	0.0	1287	805	74.66
OS07G42490	Oryza sativa	0.0	1286	805	74.53
OS06G09450	Oryza sativa	0.0	1281	804	74.63
AT5G49190	Arabidopsis thaliana	0.0	1266	801	74.28
AT3G43190	Arabidopsis thaliana	0.0	1244	804	73.63
AT5G20830	Arabidopsis thaliana	0.0	1200	806	71.09
PP00093G00500	Physcomitrella patens	0.0	1163	803	67.37
PP00303G00240	Physcomitrella patens	0.0	1160	803	68.74
PP00028G02030	Physcomitrella patens	0.0	1158	813	66.54
PP00120G00370	Physcomitrella patens	0.0	1132	776	67.65
ATR_00044G00210	Amborella trichopoda	0.0	1016	802	59.85
OS04G24430	Oryza sativa	0.0	1005	811	58.57
AT1G73370	Arabidopsis thaliana	0.0	993	807	57.62
OS02G58480	Oryza sativa	0.0	983	809	58.59
OS04G17650	Oryza sativa	0.0	947	755	59.87
AT5G37180	Arabidopsis thaliana	0.0	946	799	55.32
CV00G95450	Coccomyxa subellipsoidea C-169	0.0	937	728	61.13
PI00G03370	Picochlorum sp. SENEW3 (SE3)	0.0	884	802	53.24
RCC4223.04g06590	Picochlorum_RCC4223	0.0	878	805	52.92
HE0000G56330	Helicosporidium sp.	0.0	863	815	53.13
AC00G61310	Asterochloris sp. Cgr-DA1pho v2.0	0.0	743	819	48.11
CNC64A_002G04500	Chlorella sp NC64A	0.0	741	724	52.35
AP00G37470	Auxenochlorella protothecoides	0.0	624	504	59.13
AP00G37480	Auxenochlorella protothecoides	5e-116	366	409	47.43
AC00G44410	Asterochloris sp. Cgr-DA1pho v2.0	4e-38	154	509	26.13
OS06G43630	Oryza sativa	6e-35	147	539	26.72
AT4G10120	Arabidopsis thaliana	6e-35	147	512	26.76
OS02G09170	Oryza sativa	7e-35	147	546	24.91
OS08G20660	Oryza sativa	1e-33	143	527	25.62
RCC4223.05g02250	Picochlorum_RCC4223	1e-33	144	568	24.82
ATR_00033G01740	Amborella trichopoda	2e-33	143	569	26.01
AT5G11110	Arabidopsis thaliana	6e-33	141	560	24.46
ATR_00099G00850	Amborella trichopoda	2e-32	139	530	24.72
PP00066G01210	Physcomitrella patens	3e-32	139	572	24.83
OS01G69030	Oryza sativa	3e-32	138	522	26.05
PP00131G00600	Physcomitrella patens	6e-32	138	540	24.81
PI00G14670	Picochlorum sp. SENEW3 (SE3)	3e-31	136	575	25.22
HE0000G57540	Helicosporidium sp.	7e-31	132	503	24.85
CV00G68630	Coccomyxa subellipsoidea C-169	3e-30	133	600	25.33
AP00G64190	Auxenochlorella protothecoides	4e-30	132	553	24.41
AT1G04920	Arabidopsis thaliana	5e-30	132	523	26.00
gsu138950	Galdieria sulphuraria	2e-29	129	507	25.25
AT5G20280	Arabidopsis thaliana	1e-28	127	524	24.24
OS11G12810	Oryza sativa	1e-28	127	535	23.93
CNC64A_014G03230	Chlorella sp NC64A	5e-26	117	201	35.32
CR12G08850	Chlamydomonas reinhardtii	2e-21	105	190	33.68
CM20G01680	Cyanidioschyzon merolae	6e-10	66.6	242	22.73
DDB_G0272730	Dictyostelium discoideum	8e-10	65.9	227	22.91
WBGene00017282	Caenorhabditis elegans	6e-09	63.2	232	27.16
PTI_18G01360	Phaeodactylum tricornutum	3e-08	61.2	244	25.00
ES0097G00100	Ectocarpus siliculosus	5e-08	60.5	194	28.35
PP00003G01400	Physcomitrella patens	1e-07	54.7	45	51.11
ENSG00000119523	Homo sapiens	2e-07	58.5	241	25.73
phs317530	Phytophtora sojae	8e-07	56.2	243	25.51
CV00G77080	Coccomyxa subellipsoidea C-169	2e-06	54.7	149	29.53
PI00G54090	Picochlorum sp. SENEW3 (SE3)	4e-06	54.3	155	30.97

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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