Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Interactive Phylogenetics Module

Gene Id: ATR_00029G03190

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ATR_00029G03190	Amborella trichopoda	0.0	1173	568	100.00
ATR_00029G03220	Amborella trichopoda	0.0	1011	568	84.15
AT3G54140	Arabidopsis thaliana	0.0	848	567	71.43
AT5G01180	Arabidopsis thaliana	0.0	839	565	70.09
OS01G04950	Oryza sativa	0.0	822	558	71.33
PP00114G00050	Physcomitrella patens	0.0	769	562	67.26
ATR_00024G00950	Amborella trichopoda	0.0	746	562	64.23
AT2G02040	Arabidopsis thaliana	0.0	737	567	62.96
OS07G01070	Oryza sativa	0.0	734	560	65.00
OS03G51050	Oryza sativa	0.0	734	564	61.70
OS03G13240	Oryza sativa	0.0	687	563	58.08
AT1G62200	Arabidopsis thaliana	0.0	674	559	58.86
ATR_00024G00980	Amborella trichopoda	0.0	639	560	58.93
OS03G13250	Oryza sativa	0.0	630	558	53.76
OS01G67630	Oryza sativa	0.0	626	552	57.07
ATR_00024G00990	Amborella trichopoda	0.0	619	560	56.61
AT2G02020	Arabidopsis thaliana	0.0	605	560	54.11
PP00173G00410	Physcomitrella patens	0.0	580	565	50.44
PP00171G00030	Physcomitrella patens	0.0	573	532	52.63
PP00075G00110	Physcomitrella patens	0.0	573	547	51.74
OS03G13274	Oryza sativa	0.0	545	561	48.31
PP00014G00620	Physcomitrella patens	0.0	543	565	46.55
PP00133G00360	Physcomitrella patens	3e-179	527	565	48.14
PP00298G00140	Physcomitrella patens	2e-178	524	569	45.69
OS10G02260	Oryza sativa	2e-176	518	548	46.53
OS02G48570	Oryza sativa	4e-176	518	556	46.04
OS10G02100	Oryza sativa	5e-176	517	565	48.67
OS10G02210	Oryza sativa	2e-175	516	537	46.55
PP00246G00590	Physcomitrella patens	4e-175	516	571	46.23
OS10G02220	Oryza sativa	5e-175	514	548	44.89
PP00434G00170	Physcomitrella patens	7e-173	511	565	44.60
ATR_00067G01870	Amborella trichopoda	1e-172	510	565	44.42
OS10G02240	Oryza sativa	1e-171	506	541	48.43
PP00113G00080	Physcomitrella patens	3e-171	508	573	45.72
ATR_00120G00460	Amborella trichopoda	3e-171	506	540	46.48
ATR_00256G00010	Amborella trichopoda	4e-170	503	564	43.44
ATR_00036G01320	Amborella trichopoda	5e-170	503	565	43.72
PP00389G00030	Physcomitrella patens	1e-169	503	561	44.39
ATR_00054G00270	Amborella trichopoda	4e-169	500	573	47.47
ATR_00149G00300	Amborella trichopoda	7e-169	500	567	45.50
OS10G22560	Oryza sativa	3e-168	497	546	46.15
HE0000G52310	Helicosporidium sp.	5e-168	499	535	46.92
ATR_00067G01930	Amborella trichopoda	3e-166	493	567	42.50
AP00G32420	Auxenochlorella protothecoides	5e-166	494	529	47.26
CV00G86190	Coccomyxa subellipsoidea C-169	2e-165	492	538	49.63
PP00116G00100	Physcomitrella patens	1e-164	490	565	44.96
OS03G04570	Oryza sativa	4e-164	488	564	45.92
OS06G49250	Oryza sativa	2e-163	484	529	46.50
PP00400G00020	Physcomitrella patens	2e-163	484	533	46.34
ATR_00104G00420	Amborella trichopoda	4e-163	484	568	44.01
OS10G33210	Oryza sativa	4e-163	485	566	42.93
OS06G49220	Oryza sativa	6e-161	478	558	44.98
CNC64A_010G00890	Chlorella sp NC64A	2e-160	478	542	45.20
AT2G40460	Arabidopsis thaliana	3e-160	477	564	43.44
AT1G68570	Arabidopsis thaliana	3e-160	478	553	46.47
AT4G21680	Arabidopsis thaliana	3e-160	477	573	42.41
OS07G41250	Oryza sativa	9e-160	479	546	42.49
OS10G02080	Oryza sativa	2e-159	473	527	48.01
AT5G19640	Arabidopsis thaliana	4e-159	475	538	44.42
AT1G32450	Arabidopsis thaliana	4e-158	473	561	43.85
OS04G50940	Oryza sativa	8e-158	471	552	43.30
PP00302G00070	Physcomitrella patens	8e-158	474	578	42.56
PP00071G00970	Physcomitrella patens	9e-158	475	553	46.11
OS04G50950	Oryza sativa	6e-157	469	549	42.99
PP00298G00190	Physcomitrella patens	9e-157	469	570	45.09
OS10G42870	Oryza sativa	1e-155	465	565	43.72
AT2G26690	Arabidopsis thaliana	5e-155	464	571	44.83
ATR_00186G00140	Amborella trichopoda	9e-155	463	574	44.77
ATR_00156G00390	Amborella trichopoda	1e-154	463	561	44.56
OS05G33960	Oryza sativa	3e-153	460	561	42.96
AT5G46050	Arabidopsis thaliana	9e-153	458	562	42.88
PI00G42080	Picochlorum sp. SENEW3 (SE3)	2e-152	461	554	43.86
HE0000G08520	Helicosporidium sp.	8e-152	457	519	46.82
AT5G46040	Arabidopsis thaliana	1e-151	455	562	42.53
ATR_00086G00940	Amborella trichopoda	4e-151	454	556	44.78
AT1G12110	Arabidopsis thaliana	2e-150	452	573	42.41
OS08G05910	Oryza sativa	7e-150	451	566	44.52
OS02G47090	Oryza sativa	2e-149	449	554	44.58
OS10G33170	Oryza sativa	1e-148	448	564	41.84
OS03G48180	Oryza sativa	5e-148	446	562	41.99
OS06G15370	Oryza sativa	5e-148	446	568	42.78
OS10G02340	Oryza sativa	2e-146	441	540	43.89
OS02G46460	Oryza sativa	2e-146	442	560	42.86
ATR_00022G01870	Amborella trichopoda	3e-146	442	561	44.21
OS10G40600	Oryza sativa	7e-146	441	562	43.42
OS05G34030	Oryza sativa	2e-145	440	557	42.19
ATR_00002G04270	Amborella trichopoda	5e-145	439	570	40.70
OS05G34010	Oryza sativa	6e-145	438	556	41.37
AC00G76010	Asterochloris sp. Cgr-DA1pho v2.0	7e-145	439	561	43.67
RCC4223.05g02060	Picochlorum_RCC4223	1e-144	441	554	44.40
AT5G13400	Arabidopsis thaliana	2e-144	438	563	41.92
ATR_00016G00080	Amborella trichopoda	2e-143	437	563	42.27
PI00G49640	Picochlorum sp. SENEW3 (SE3)	2e-143	436	543	44.75
AT3G54450	Arabidopsis thaliana	1e-142	431	548	40.15
AT3G53960	Arabidopsis thaliana	3e-142	431	567	40.04
RCC4223.18g01160	Picochlorum_RCC4223	6e-142	432	543	44.20
AT2G37900	Arabidopsis thaliana	2e-141	429	561	39.75
AP00G52100	Auxenochlorella protothecoides	1e-140	426	514	45.72
ATR_00165G00370	Amborella trichopoda	2e-139	424	563	42.63
AP00G65500	Auxenochlorella protothecoides	4e-139	423	582	42.10
AT1G72140	Arabidopsis thaliana	1e-138	421	562	38.97
AT1G22540	Arabidopsis thaliana	5e-138	419	557	41.65
ATR_00019G00590	Amborella trichopoda	2e-136	414	542	40.41
ATR_00002G04300	Amborella trichopoda	3e-136	415	554	39.89
CV00G87420	Coccomyxa subellipsoidea C-169	6e-136	415	555	42.88
OS01G37590	Oryza sativa	2e-135	413	553	43.22
ATR_00169G00300	Amborella trichopoda	5e-135	411	537	41.53
VC00G30280	Volvox carteri	7e-135	414	573	41.36
OS01G65110	Oryza sativa	4e-134	409	565	39.47
OS03G60850	Oryza sativa	2e-133	408	556	39.57
OS06G21900	Oryza sativa	6e-133	409	569	40.60
OS06G49240	Oryza sativa	1e-131	399	429	45.22
OS03G01290	Oryza sativa	2e-131	403	555	42.16
AT3G21670	Arabidopsis thaliana	1e-130	401	560	41.79
AT1G72120	Arabidopsis thaliana	4e-130	399	562	41.64
AT1G59740	Arabidopsis thaliana	4e-130	400	556	39.21
AT1G69870	Arabidopsis thaliana	2e-129	399	552	40.04
OS01G65100	Oryza sativa	1e-128	394	562	39.50
ATR_00067G01530	Amborella trichopoda	2e-128	392	462	42.86
OS10G42900	Oryza sativa	3e-128	395	540	40.56
AT1G72130	Arabidopsis thaliana	5e-128	393	544	38.60
ATR_00088G00540	Amborella trichopoda	5e-128	391	465	46.24
AT1G33440	Arabidopsis thaliana	8e-128	394	560	39.64
AT1G22550	Arabidopsis thaliana	1e-127	392	562	39.50
AT1G22570	Arabidopsis thaliana	1e-126	390	566	41.17
AT1G72125	Arabidopsis thaliana	2e-126	389	557	40.22
PP00072G00360	Physcomitrella patens	3e-125	390	576	37.50
PP00143G00670	Physcomitrella patens	2e-124	391	585	37.26
AT1G69850	Arabidopsis thaliana	2e-124	385	577	36.57
ATR_00078G00550	Amborella trichopoda	3e-123	382	572	40.03
OS12G44110	Oryza sativa	2e-121	377	549	38.07
OS01G54515	Oryza sativa	2e-121	375	508	40.55
OS04G50930	Oryza sativa	3e-121	378	552	39.49
OS04G39030	Oryza sativa	7e-121	376	569	42.53
AT1G27040	Arabidopsis thaliana	8e-121	375	557	37.52
OS01G68510	Oryza sativa	1e-120	375	551	37.75
ATR_00099G01020	Amborella trichopoda	4e-120	374	560	37.50
OS01G01360	Oryza sativa	5e-120	374	552	41.30
AT1G18880	Arabidopsis thaliana	6e-120	374	569	36.73
OS12G44100	Oryza sativa	3e-118	369	546	37.18
ATR_00036G01380	Amborella trichopoda	4e-117	362	427	43.56
OS01G65210	Oryza sativa	3e-115	365	553	36.53
OS05G35650	Oryza sativa	8e-114	357	537	38.36
AT5G62730	Arabidopsis thaliana	1e-113	357	576	35.94
ATR_00109G00940	Amborella trichopoda	2e-111	351	565	35.04
OS06G38294	Oryza sativa	1e-110	350	580	37.24
AT5G62680	Arabidopsis thaliana	2e-110	350	550	37.45
AT1G27080	Arabidopsis thaliana	2e-110	348	553	37.07
OS05G35594	Oryza sativa	3e-110	347	546	36.26
OS05G27010	Oryza sativa	7e-110	345	462	41.99
AT1G52190	Arabidopsis thaliana	2e-109	347	550	35.45
ATR_00045G01590	Amborella trichopoda	1e-106	336	463	40.82
OS04G36040	Oryza sativa	2e-106	339	574	37.80
AT3G16180	Arabidopsis thaliana	2e-105	336	575	34.78
ATR_00118G00290	Amborella trichopoda	1e-104	327	401	41.65
ATR_00089G01050	Amborella trichopoda	2e-104	332	562	34.70
AT3G47960	Arabidopsis thaliana	4e-102	328	548	35.22
AT5G14940	Arabidopsis thaliana	3e-100	321	563	32.68
OS04G56560	Oryza sativa	3e-100	323	590	35.93
OS01G67640	Oryza sativa	5e-99	319	269	59.48
OS11G18044	Oryza sativa	9e-99	318	565	33.81
OS11G12740	Oryza sativa	2e-97	316	583	37.22
AT3G45650	Arabidopsis thaliana	2e-95	309	562	32.74
OS11G17970	Oryza sativa	4e-94	306	576	32.64
ATR_00055G01460	Amborella trichopoda	1e-93	303	524	34.35
AT3G25260	Arabidopsis thaliana	2e-93	302	559	33.27
OS04G59480	Oryza sativa	9e-93	300	552	33.15
AT3G45680	Arabidopsis thaliana	3e-91	298	571	31.52
OS01G55610	Oryza sativa	1e-90	297	559	33.99
OS04G41400	Oryza sativa	2e-90	296	567	33.33
AT3G45720	Arabidopsis thaliana	2e-90	296	559	33.09
AT1G69860	Arabidopsis thaliana	4e-90	295	547	34.55
AT3G45660	Arabidopsis thaliana	6e-90	294	545	32.48
OS06G13210	Oryza sativa	9e-89	291	560	33.93
AT3G01350	Arabidopsis thaliana	1e-88	291	579	31.09
AT5G28470	Arabidopsis thaliana	3e-88	290	555	31.17
OS01G65150	Oryza sativa	3e-88	289	554	34.84
OS12G12934	Oryza sativa	2e-87	288	567	34.39
OS11G23890	Oryza sativa	2e-87	290	577	31.20
OS04G41450	Oryza sativa	1e-86	286	558	32.44
OS05G27304	Oryza sativa	1e-86	286	562	35.05
OS01G65169	Oryza sativa	6e-86	283	580	33.79
AT3G45710	Arabidopsis thaliana	3e-84	279	554	30.51
AT3G45700	Arabidopsis thaliana	4e-84	278	544	30.70
OS06G13200	Oryza sativa	5e-82	272	563	32.68
OS01G55600	Oryza sativa	6e-82	273	552	32.97
AT3G25280	Arabidopsis thaliana	1e-79	266	545	32.29
ATR_00118G00320	Amborella trichopoda	1e-76	253	298	48.66
AT3G45690	Arabidopsis thaliana	1e-75	255	542	29.89
ATR_00024G00970	Amborella trichopoda	6e-74	241	271	46.86
OS11G18110	Oryza sativa	2e-73	251	464	33.19
HE0000G42610	Helicosporidium sp.	3e-73	240	223	52.47
CNC64A_007G03700	Chlorella sp NC64A	1e-70	241	215	53.02
ATR_00112G00370	Amborella trichopoda	6e-70	236	348	37.64
CR04G03930	Chlamydomonas reinhardtii	3e-69	243	253	49.01
OS01G65140	Oryza sativa	7e-68	229	249	46.59
ATR_00118G00300	Amborella trichopoda	4e-67	225	259	44.40
ATR_00070G00600	Amborella trichopoda	4e-66	223	271	42.80
PP00147G00390	Physcomitrella patens	5e-65	220	223	49.78
OS08G41590	Oryza sativa	1e-63	219	427	31.85
ATR_00162G00100	Amborella trichopoda	3e-63	216	274	43.07
ATR_00002G04290	Amborella trichopoda	1e-60	210	325	37.23
Naga_100030g44	Nannochloropsis gaditana	2e-60	218	445	33.93
phs97310	Phytophtora sojae	2e-58	210	562	29.36
ENSG00000139370	Homo sapiens	2e-56	204	566	28.45
OS05G34000	Oryza sativa	8e-56	204	306	37.91
DDB_G0272550	Dictyostelium discoideum	1e-55	202	483	32.09
PP00069G00140	Physcomitrella patens	8e-55	199	527	26.94
OS04G41410	Oryza sativa	3e-54	196	459	30.72
ENSMUSG00000029416	Mus musculus	5e-52	192	577	28.42
OS01G65200	Oryza sativa	5e-51	185	372	35.22
PP00009G01060	Physcomitrella patens	3e-48	181	495	27.07
phs89090	Phytophtora sojae	3e-48	182	585	26.67
OS01G65190	Oryza sativa	3e-48	182	226	41.59
FC006G04490	Fragilariopsis cylindrus	5e-48	181	534	28.28
OS10G05780	Oryza sativa	5e-47	178	246	40.65
AT2G38100	Arabidopsis thaliana	1e-45	173	517	28.05
ENSMUSG00000025557	Mus musculus	1e-44	172	407	27.76
PP00065G01500	Physcomitrella patens	2e-44	169	490	27.96
ENSMUSG00000022899	Mus musculus	2e-43	169	409	28.61
OS01G65120	Oryza sativa	4e-43	166	303	33.00
HE0000G35580	Helicosporidium sp.	6e-43	160	256	40.23
ATR_00023G02330	Amborella trichopoda	2e-42	159	241	38.17
phs42450	Phytophtora sojae	2e-42	164	567	26.63
PP00004G00090	Physcomitrella patens	6e-42	157	280	35.36
ATR_00070G00590	Amborella trichopoda	8e-42	155	228	42.11
ATR_00023G02340	Amborella trichopoda	2e-41	155	278	33.09
FBgn0028491	Drosophila melanogaster	2e-41	163	446	27.58
FBgn0265575	Drosophila melanogaster	4e-41	162	377	29.97
ATR_00024G00960	Amborella trichopoda	2e-39	145	118	57.63
ATR_00020G00660	Amborella trichopoda	2e-39	148	244	35.25
ENSG00000163406	Homo sapiens	3e-38	153	432	28.94
AT5G11570	Arabidopsis thaliana	8e-38	149	243	36.21
DDB_G0272468	Dictyostelium discoideum	2e-37	151	494	27.94
ATR_00162G00110	Amborella trichopoda	3e-36	138	165	44.85
WBGene00003878	Caenorhabditis elegans	3e-36	147	413	28.09
phs07850	Phytophtora sojae	7e-36	145	598	25.08
WBGene00003877	Caenorhabditis elegans	2e-35	146	423	26.71
AA0005G00440	Aureococcus anophagefferens	2e-35	140	481	27.44
ATR_00054G00250	Amborella trichopoda	5e-35	134	201	36.32
ES0453G00050	Ectocarpus siliculosus	3e-34	139	284	34.15
WBGene00003876	Caenorhabditis elegans	1e-31	134	406	27.83
ATR_00096G00160	Amborella trichopoda	3e-31	125	82	68.29
SPBC13A2.04c	Schizosaccharomyces pombe	5e-31	131	501	26.55
PTI_12G03880	Phaeodactylum tricornutum	3e-30	129	563	24.16
ATR_00118G00280	Amborella trichopoda	6e-29	118	150	44.00
DDB_G0267874	Dictyostelium discoideum	1e-28	124	518	22.20
OS06G49230	Oryza sativa	2e-28	115	107	46.73
YKR093W	Saccharomyces cerevisiae strain S288C	7e-28	122	507	25.05
phs07890	Phytophtora sojae	4e-26	110	193	34.72
OS05G27050	Oryza sativa	5e-26	108	113	40.71
phs255230	Phytophtora sojae	5e-26	116	578	23.53
phs319720	Phytophtora sojae	9e-26	115	238	33.19
ENSG00000188991	Homo sapiens	1e-24	112	564	22.16
OS03G17770	Oryza sativa	2e-24	108	129	45.74
phs42430	Phytophtora sojae	8e-22	102	454	26.21
ATR_00067G01540	Amborella trichopoda	1e-21	97.4	194	30.41
ATR_00109G00960	Amborella trichopoda	1e-21	97.1	125	38.40
FC056G00710	Fragilariopsis cylindrus	3e-21	101	551	22.50
FC011G01070	Fragilariopsis cylindrus	5e-21	100	546	23.81
emh586030	Emiliania huxleyi	2e-20	98.2	492	26.02
ATR_00020G00670	Amborella trichopoda	1e-19	91.7	125	44.00
OS04G34640	Oryza sativa	2e-19	92.8	97	49.48
TP08G01040	Thalassiosira pseudonana	1e-18	93.6	461	23.86
OS12G13790	Oryza sativa	1e-18	92.8	188	35.11
AA0009G01620	Aureococcus anophagefferens	6e-18	90.9	228	28.07
gsu136190	Galdieria sulphuraria	1e-17	89.4	152	38.82
OS07G21960	Oryza sativa	3e-17	86.7	273	29.67
ATR_00088G00530	Amborella trichopoda	1e-16	81.3	85	40.00
FC015G01430	Fragilariopsis cylindrus	1e-16	87.0	510	25.29
emh44980	Emiliania huxleyi	2e-15	82.4	441	25.62
FBgn0037730	Drosophila melanogaster	5e-15	82.0	553	22.06
phs31460	Phytophtora sojae	2e-14	80.5	590	21.36
ATR_00048G01070	Amborella trichopoda	1e-13	72.8	72	47.22
TP04G00530	Thalassiosira pseudonana	1e-13	78.2	219	31.96
ORCC809_11G02490	Ostreococcus sp RCC809	1e-13	77.0	456	22.37
OS02G52060	Oryza sativa	2e-13	74.7	115	37.39
ATR_00162G00120	Amborella trichopoda	3e-13	72.0	96	39.58
FC009G05560	Fragilariopsis cylindrus	4e-13	76.3	225	31.11
ATR_00089G01060	Amborella trichopoda	1e-12	69.7	61	47.54
phs239650	Phytophtora sojae	2e-12	72.0	247	27.94
RCC4223.111g00230	Picochlorum_RCC4223	2e-12	73.9	265	26.42
OT_11G01550	Ostreococcus tauri	9e-12	71.6	475	19.79
OS08G31960	Oryza sativa	6e-11	67.0	62	53.23
OS08G41600	Oryza sativa	1e-10	64.3	82	37.80
PTI_12G02910	Phaeodactylum tricornutum	2e-10	67.4	226	28.32
emh670440	Emiliania huxleyi	2e-09	63.2	166	30.72
ES0051G00510	Ectocarpus siliculosus	5e-08	56.6	69	37.68
OS02G31980	Oryza sativa	1e-07	55.1	84	36.90
OS12G15600	Oryza sativa	2e-07	56.6	128	31.25
OS01G28980	Oryza sativa	4e-07	53.5	55	43.64
MRCC299_12G04110	Micromonas sp RCC299	2e-06	54.7	249	25.70

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment