Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ATR_00004G02620	Amborella trichopoda	6e-66	200	95	100.00
ATR_00004G02430	Amborella trichopoda	7e-33	121	94	67.02
AT1G11545	Arabidopsis thaliana	2e-28	109	81	62.96
OS07G34580	Oryza sativa	3e-28	108	66	69.70
ATR_00453G00010	Amborella trichopoda	2e-19	84.3	55	63.64
ATR_00019G03550	Amborella trichopoda	3e-19	83.6	71	56.34
ATR_00026G01070	Amborella trichopoda	3e-18	80.9	74	54.05
AT2G14620	Arabidopsis thaliana	3e-18	80.9	90	47.78
ATR_00026G01130	Amborella trichopoda	3e-17	77.4	71	53.52
ATR_00016G02940	Amborella trichopoda	3e-17	78.2	72	48.61
ATR_00026G01160	Amborella trichopoda	3e-17	77.8	70	54.29
OS11G33270	Oryza sativa	4e-17	77.8	53	64.15
PP00004G00240	Physcomitrella patens	4e-17	77.8	56	60.71
AT4G03210	Arabidopsis thaliana	5e-17	77.8	52	63.46
ATR_00026G01110	Amborella trichopoda	5e-17	77.0	71	53.52
OS06G48180	Oryza sativa	6e-17	77.4	70	47.14
PP00168G00160	Physcomitrella patens	6e-17	77.4	56	58.93
AT5G13870	Arabidopsis thaliana	6e-17	77.4	72	47.22
PP00193G00050	Physcomitrella patens	6e-17	77.8	49	65.31
AT4G25820	Arabidopsis thaliana	7e-17	77.0	53	58.49
PP00309G00230	Physcomitrella patens	7e-17	77.0	55	58.18
ATR_00109G01360	Amborella trichopoda	2e-16	75.5	65	52.31
ATR_00065G01750	Amborella trichopoda	2e-16	76.3	58	50.00
AT5G57530	Arabidopsis thaliana	2e-16	76.3	53	56.60
ATR_00019G03570	Amborella trichopoda	2e-16	75.9	62	51.61
PP00291G00470	Physcomitrella patens	2e-16	76.3	51	60.78
AT5G57540	Arabidopsis thaliana	3e-16	75.5	53	54.72
PP00309G00140	Physcomitrella patens	3e-16	75.5	54	57.41
OS06G48200	Oryza sativa	6e-16	74.3	73	46.58
PP00026G00650	Physcomitrella patens	7e-16	74.7	51	66.67
OS06G48170	Oryza sativa	1e-15	73.9	90	45.56
ATR_00019G03590	Amborella trichopoda	1e-15	73.9	58	51.72
AT5G65730	Arabidopsis thaliana	1e-15	73.6	71	50.70
PP00168G00050	Physcomitrella patens	2e-15	73.6	51	62.75
AT4G37800	Arabidopsis thaliana	2e-15	73.2	50	60.00
ATR_00026G01150	Amborella trichopoda	2e-15	72.0	71	50.70
PP00004G00260	Physcomitrella patens	3e-15	72.8	70	50.00
PP00272G00150	Physcomitrella patens	3e-15	72.4	53	54.72
AT2G06850	Arabidopsis thaliana	4e-15	72.4	72	47.22
PP00309G00220	Physcomitrella patens	4e-15	72.4	51	62.75
ATR_00062G00050	Amborella trichopoda	5e-15	72.0	71	49.30
ATR_00065G01770	Amborella trichopoda	5e-15	72.0	58	48.28
OS08G14210	Oryza sativa	5e-15	73.2	53	56.60
ATR_00062G00060	Amborella trichopoda	5e-15	71.2	71	47.89
PP00618G00010	Physcomitrella patens	6e-15	73.2	51	60.78
AT3G23730	Arabidopsis thaliana	6e-15	71.6	56	51.79
ATR_00062G00020	Amborella trichopoda	8e-15	71.6	68	51.47
OS04G51520	Oryza sativa	8e-15	72.0	53	52.83
AT5G57550	Arabidopsis thaliana	8e-15	71.2	70	48.57
OS06G48160	Oryza sativa	1e-14	71.2	68	45.59
OS04G51450	Oryza sativa	2e-14	71.2	55	52.73
AT4G25810	Arabidopsis thaliana	2e-14	70.5	53	54.72
AT4G14130	Arabidopsis thaliana	2e-14	70.5	53	50.94
PP00195G00150	Physcomitrella patens	2e-14	70.9	65	47.69
OS04G51510	Oryza sativa	2e-14	70.1	53	54.72
OS08G13980	Oryza sativa	2e-14	70.5	53	56.60
OS08G14200	Oryza sativa	2e-14	70.1	68	47.06
AT5G57560	Arabidopsis thaliana	3e-14	70.1	53	52.83
OS06G22919	Oryza sativa	4e-14	69.7	55	49.09
AT2G18800	Arabidopsis thaliana	9e-14	68.9	70	48.57
AT4G30270	Arabidopsis thaliana	9e-14	68.2	53	52.83
OS04G51460	Oryza sativa	2e-13	67.4	92	38.04
ATR_00019G03580	Amborella trichopoda	2e-13	66.6	68	48.53
PP00005G00910	Physcomitrella patens	2e-13	68.9	93	46.24
AT4G28850	Arabidopsis thaliana	4e-13	67.0	55	47.27
AT5G48070	Arabidopsis thaliana	5e-13	66.6	53	52.83
PP00011G01530	Physcomitrella patens	6e-13	66.6	57	54.39
PP00089G00910	Physcomitrella patens	7e-13	66.2	72	45.83
AT4G13090	Arabidopsis thaliana	7e-13	66.2	55	49.09
OS02G17880	Oryza sativa	7e-13	66.2	55	47.27
OS06G13040	Oryza sativa	9e-13	66.2	71	45.07
PP00122G00290	Physcomitrella patens	1e-12	65.9	55	49.09
OS07G29750	Oryza sativa	1e-12	65.5	58	50.00
AT4G30290	Arabidopsis thaliana	1e-12	65.1	53	50.94
PP00074G00080	Physcomitrella patens	1e-12	66.6	92	42.39
AT1G65310	Arabidopsis thaliana	1e-12	65.1	53	50.94
PP00410G00130	Physcomitrella patens	2e-12	65.5	55	47.27
AT4G30280	Arabidopsis thaliana	2e-12	64.7	53	50.94
OS02G17900	Oryza sativa	4e-12	64.3	49	51.02
PP00002G02710	Physcomitrella patens	5e-12	61.2	56	44.64
OS03G01800	Oryza sativa	5e-12	63.9	77	44.16
ATR_00082G00420	Amborella trichopoda	1e-11	63.2	60	45.00
OS08G13920	Oryza sativa	1e-11	62.8	65	43.08
AT2G01850	Arabidopsis thaliana	1e-11	63.2	70	48.57
AT3G25050	Arabidopsis thaliana	2e-11	62.4	55	47.27
PP00019G00220	Physcomitrella patens	2e-11	62.4	52	53.85
AT2G36870	Arabidopsis thaliana	2e-11	62.4	60	46.67
AT3G44990	Arabidopsis thaliana	3e-11	61.6	60	45.00
AT4G13080	Arabidopsis thaliana	4e-11	61.6	55	45.45
OS10G39840	Oryza sativa	4e-11	61.6	60	45.00
PP00048G00500	Physcomitrella patens	4e-11	61.6	75	41.33
AT1G14720	Arabidopsis thaliana	4e-11	62.0	72	48.61
ATR_00048G00580	Amborella trichopoda	5e-11	61.2	68	47.06
OS10G02770	Oryza sativa	6e-11	61.6	68	48.53
OS03G13570	Oryza sativa	1e-10	60.8	68	44.12
AT4G18990	Arabidopsis thaliana	1e-10	60.5	57	49.12
PP00156G00440	Physcomitrella patens	2e-10	59.7	55	43.64
PP00156G00420	Physcomitrella patens	2e-10	59.7	55	43.64
PP00081G01240	Physcomitrella patens	2e-10	59.7	52	46.15
OS02G03550	Oryza sativa	4e-10	59.3	64	46.88
PP00213G00650	Physcomitrella patens	4e-10	58.9	55	43.64
AT1G10550	Arabidopsis thaliana	7e-10	58.5	70	35.71
ATR_00024G00080	Amborella trichopoda	8e-10	58.2	72	44.44
ATR_01729G00020	Amborella trichopoda	9e-10	55.1	74	41.89
AT1G32170	Arabidopsis thaliana	1e-09	58.2	72	43.06
PP00309G00200	Physcomitrella patens	1e-09	56.6	52	46.15
PP00353G00180	Physcomitrella patens	1e-09	56.6	65	47.69
OS02G57770	Oryza sativa	1e-09	57.4	70	41.43
PP00141G00620	Physcomitrella patens	1e-09	57.0	48	47.92
ATR_00013G00910	Amborella trichopoda	3e-09	55.5	74	41.89
PP00486G00100	Physcomitrella patens	4e-09	55.8	46	50.00
PP00486G00080	Physcomitrella patens	4e-09	55.8	46	50.00
PP00089G00960	Physcomitrella patens	6e-09	55.1	52	51.92
AT3G48580	Arabidopsis thaliana	9e-09	54.7	55	41.82
OS09G23220	Oryza sativa	2e-08	54.3	53	49.06
PP00346G00070	Physcomitrella patens	2e-08	54.7	73	39.73
OS02G46910	Oryza sativa	1e-07	52.4	56	48.21
OS10G42670	Oryza sativa	2e-07	51.6	57	43.86
OS03G63760	Oryza sativa	7e-07	50.1	67	40.30
ATR_00069G00950	Amborella trichopoda	1e-06	48.5	64	39.06

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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